RNA–Protein interactions for RNA: ENST00000496347.1

HDAC4-213, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 995 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-213ENST00000496347 SP110Q9HB58 689 aa15.92■□□□□ 0.14
HDAC4-213ENST00000496347 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.92■□□□□ 0.14
HDAC4-213ENST00000496347 IP6K2Q9UHH9 426 aa15.92■□□□□ 0.14
HDAC4-213ENST00000496347 ITM2BQ9Y287 266 aa15.92■□□□□ 0.14
HDAC4-213ENST00000496347 HS3ST3A1Q9Y663 406 aa15.92■□□□□ 0.14
HDAC4-213ENST00000496347 ZFHX4Q86UP3 3567 aa15.91■□□□□ 0.14
HDAC4-213ENST00000496347 ZFYVE26Q68DK2 2539 aa15.91■□□□□ 0.14
HDAC4-213ENST00000496347 A0A087X0T9 212 aa15.91■□□□□ 0.14
HDAC4-213ENST00000496347 ENC1O14682 589 aa15.91■□□□□ 0.14
HDAC4-213ENST00000496347 CBFA2T2O43439 604 aa15.91■□□□□ 0.14
HDAC4-213ENST00000496347 CYP1A2P05177 515 aa15.91■□□□□ 0.14
HDAC4-213ENST00000496347 C1SP09871 688 aa15.91■□□□□ 0.14
HDAC4-213ENST00000496347 FAM228BP0C875 321 aa15.91■□□□□ 0.14
HDAC4-213ENST00000496347 PAPOLAP51003 745 aaKnown RBP15.91■□□□□ 0.14
HDAC4-213ENST00000496347 CLDN2P57739 230 aa15.91■□□□□ 0.14
HDAC4-213ENST00000496347 ELP6Q0PNE2 266 aa15.91■□□□□ 0.14
HDAC4-213ENST00000496347 SMTNL2Q2TAL5 461 aa15.91■□□□□ 0.14
HDAC4-213ENST00000496347 BOLA3Q53S33 107 aa15.91■□□□□ 0.14
HDAC4-213ENST00000496347 ALKBH5Q6P6C2 394 aaKnown RBP15.91■□□□□ 0.14
HDAC4-213ENST00000496347 BRAT1Q6PJG6 821 aa15.91■□□□□ 0.14
HDAC4-213ENST00000496347 CCNI2Q6ZMN8 369 aaPredicted RBP15.91■□□□□ 0.14
HDAC4-213ENST00000496347 TMPRSS7Q7RTY8 843 aa15.91■□□□□ 0.14
HDAC4-213ENST00000496347 PARGQ86W56 976 aa15.91■□□□□ 0.14
HDAC4-213ENST00000496347 CPLX3Q8WVH0 158 aa15.91■□□□□ 0.14
HDAC4-213ENST00000496347 EXOC2Q96KP1 924 aa15.91■□□□□ 0.14
HDAC4-213ENST00000496347 ZNF641Q96N77 438 aaPredicted RBP15.91■□□□□ 0.14
HDAC4-213ENST00000496347 NUP85Q9BW27 656 aa15.91■□□□□ 0.14
HDAC4-213ENST00000496347 XPO4Q9C0E2 1151 aaKnown RBP15.91■□□□□ 0.14
HDAC4-213ENST00000496347 SLC39A8Q9C0K1 460 aa15.91■□□□□ 0.14
HDAC4-213ENST00000496347 CWC15Q9P013 229 aaKnown RBP15.91■□□□□ 0.14
HDAC4-213ENST00000496347 GGT7Q9UJ14 662 aa15.91■□□□□ 0.14
HDAC4-213ENST00000496347 ANAPC7Q9UJX3 599 aa15.91■□□□□ 0.14
HDAC4-213ENST00000496347 SHROOM3Q8TF72 1996 aa15.91■□□□□ 0.14
HDAC4-213ENST00000496347 CELSR3Q9NYQ7 3312 aa15.9■□□□□ 0.14
HDAC4-213ENST00000496347 IGLON5A6NGN9 336 aa15.9■□□□□ 0.14
HDAC4-213ENST00000496347 J3KR12 359 aa15.9■□□□□ 0.14
HDAC4-213ENST00000496347 DFFAO00273 331 aa15.9■□□□□ 0.14
HDAC4-213ENST00000496347 FPGTO14772 594 aa15.9■□□□□ 0.14
HDAC4-213ENST00000496347 RFPL3O75679 317 aa15.9■□□□□ 0.14
HDAC4-213ENST00000496347 PALMO75781 387 aa15.9■□□□□ 0.14
HDAC4-213ENST00000496347 LDOC1O95751 146 aaPredicted RBP15.9■□□□□ 0.14
HDAC4-213ENST00000496347 IL1R2P27930 398 aa15.9■□□□□ 0.14
HDAC4-213ENST00000496347 CASP14P31944 242 aa15.9■□□□□ 0.14
HDAC4-213ENST00000496347 CSNK1DP48730 415 aa15.9■□□□□ 0.14
HDAC4-213ENST00000496347 ACADVLP49748 655 aa15.9■□□□□ 0.14
HDAC4-213ENST00000496347 SLC25A11Q02978 314 aaKnown RBP15.9■□□□□ 0.14
HDAC4-213ENST00000496347 IL10RBQ08334 325 aa15.9■□□□□ 0.14
HDAC4-213ENST00000496347 ILKQ13418 452 aa15.9■□□□□ 0.14
HDAC4-213ENST00000496347 CYTH1Q15438 398 aa15.9■□□□□ 0.14
HDAC4-213ENST00000496347 SMAD1Q15797 465 aaKnown RBP15.9■□□□□ 0.14
HDAC4-213ENST00000496347 CFAP58Q5T655 872 aa15.9■□□□□ 0.14
HDAC4-213ENST00000496347 TMCO4Q5TGY1 634 aa15.9■□□□□ 0.14
HDAC4-213ENST00000496347 SPECC1LQ69YQ0 1117 aa15.9■□□□□ 0.14
HDAC4-213ENST00000496347 TMCO3Q6UWJ1 677 aa15.9■□□□□ 0.14
HDAC4-213ENST00000496347 Q6ZSR6 202 aa15.9■□□□□ 0.14
HDAC4-213ENST00000496347 TTC7BQ86TV6 843 aa15.9■□□□□ 0.14
HDAC4-213ENST00000496347 EID2Q8N6I1 236 aa15.9■□□□□ 0.14
HDAC4-213ENST00000496347 CXorf40AQ8TE69 158 aa15.9■□□□□ 0.14
HDAC4-213ENST00000496347 KLF6Q99612 283 aaPredicted RBP15.9■□□□□ 0.14
HDAC4-213ENST00000496347 CINPQ9BW66 212 aaPredicted RBP15.9■□□□□ 0.14
HDAC4-213ENST00000496347 ATP13A3Q9H7F0 1226 aa15.9■□□□□ 0.14
HDAC4-213ENST00000496347 RCOR3Q9P2K3 495 aaPredicted RBP15.9■□□□□ 0.14
HDAC4-213ENST00000496347 LCMT1Q9UIC8 334 aa15.9■□□□□ 0.14
HDAC4-213ENST00000496347 NENFQ9UMX5 172 aa15.9■□□□□ 0.14
HDAC4-213ENST00000496347 GOLGA8CPA6NN73 597 aa15.89■□□□□ 0.13
HDAC4-213ENST00000496347 RAD51BO15315 384 aa15.89■□□□□ 0.13
HDAC4-213ENST00000496347 SDC3O75056 442 aa15.89■□□□□ 0.13
HDAC4-213ENST00000496347 PIGNO95427 931 aa15.89■□□□□ 0.13
HDAC4-213ENST00000496347 PAK4O96013 591 aaPredicted RBP15.89■□□□□ 0.13
HDAC4-213ENST00000496347 NME1P15531 152 aaKnown RBP15.89■□□□□ 0.13
HDAC4-213ENST00000496347 XPAP23025 273 aaPredicted RBP15.89■□□□□ 0.13
HDAC4-213ENST00000496347 SERPINA4P29622 427 aa15.89■□□□□ 0.13
HDAC4-213ENST00000496347 SERPINB6P35237 376 aa15.89■□□□□ 0.13
HDAC4-213ENST00000496347 HS1BP3Q53T59 392 aa15.89■□□□□ 0.13
HDAC4-213ENST00000496347 POLNQ7Z5Q5 900 aa15.89■□□□□ 0.13
HDAC4-213ENST00000496347 TSC1Q92574 1164 aa15.89■□□□□ 0.13
HDAC4-213ENST00000496347 ZNF599Q96NL3 588 aa15.89■□□□□ 0.13
HDAC4-213ENST00000496347 CSPG4P5Q96PW8 444 aa15.89■□□□□ 0.13
HDAC4-213ENST00000496347 DNAJC7Q99615 494 aa15.89■□□□□ 0.13
HDAC4-213ENST00000496347 SEPT3Q9UH03 358 aa15.89■□□□□ 0.13
HDAC4-213ENST00000496347 IPO11Q9UI26 975 aaKnown RBP15.89■□□□□ 0.13
HDAC4-213ENST00000496347 ZMIZ1Q9ULJ6 1067 aa15.89■□□□□ 0.13
HDAC4-213ENST00000496347 ITPR1Q14643 2758 aa15.89■□□□□ 0.13
HDAC4-213ENST00000496347 SPTY2D1-AS1A0A0U1RR47 76 aa15.88■□□□□ 0.13
HDAC4-213ENST00000496347 POM121BA6NF01 834 aa15.88■□□□□ 0.13
HDAC4-213ENST00000496347 H3BM21 787 aa15.88■□□□□ 0.13
HDAC4-213ENST00000496347 MYO1FO00160 1098 aa15.88■□□□□ 0.13
HDAC4-213ENST00000496347 TOR1BO14657 336 aa15.88■□□□□ 0.13
HDAC4-213ENST00000496347 INSIG1O15503 277 aa15.88■□□□□ 0.13
HDAC4-213ENST00000496347 PIAS2O75928 621 aa15.88■□□□□ 0.13
HDAC4-213ENST00000496347 TM7SF2O76062 418 aa15.88■□□□□ 0.13
HDAC4-213ENST00000496347 TCF4P15884 667 aa15.88■□□□□ 0.13
HDAC4-213ENST00000496347 DGKAP23743 735 aa15.88■□□□□ 0.13
HDAC4-213ENST00000496347 HSPA9P38646 679 aaKnown RBP15.88■□□□□ 0.13
HDAC4-213ENST00000496347 MMP12P39900 470 aa15.88■□□□□ 0.13
HDAC4-213ENST00000496347 PFN3P60673 137 aa15.88■□□□□ 0.13
HDAC4-213ENST00000496347 AP1S1P61966 158 aa15.88■□□□□ 0.13
HDAC4-213ENST00000496347 HNRNPKP61978 463 aaKnown RBP eCLIP15.88■□□□□ 0.13
HDAC4-213ENST00000496347 BNIP3Q12983 259 aa15.88■□□□□ 0.13
HDAC4-213ENST00000496347 ZNF211Q13398 564 aaPredicted RBP15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms