RNA–Protein interactions for RNA: ENST00000495756.5

ATG3-208, Transcript of autophagy related 3, humanhuman

TSL 1 (best)

Gene ATG3, Length 1,455 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-208ENST00000495756 KCTD11Q693B1 232 aa19.67■□□□□ 0.74
ATG3-208ENST00000495756 GDPD4Q6W3E5 623 aa19.67■□□□□ 0.74
ATG3-208ENST00000495756 MMAAQ8IVH4 418 aaKnown RBP19.67■□□□□ 0.74
ATG3-208ENST00000495756 SPEM1Q8N4L4 309 aa19.67■□□□□ 0.74
ATG3-208ENST00000495756 PDCD7Q8N8D1 485 aaKnown RBP19.67■□□□□ 0.74
ATG3-208ENST00000495756 ZNF641Q96N77 438 aaPredicted RBP19.67■□□□□ 0.74
ATG3-208ENST00000495756 IER2Q9BTL4 223 aa19.67■□□□□ 0.74
ATG3-208ENST00000495756 TDRD1Q9BXT4 1180 aaKnown RBP19.67■□□□□ 0.74
ATG3-208ENST00000495756 OSBPL1AQ9BXW6 950 aa19.67■□□□□ 0.74
ATG3-208ENST00000495756 TRIM31Q9BZY9 425 aa19.67■□□□□ 0.74
ATG3-208ENST00000495756 MKRN2Q9H000 416 aaKnown RBP19.67■□□□□ 0.74
ATG3-208ENST00000495756 RAB17Q9H0T7 212 aa19.67■□□□□ 0.74
ATG3-208ENST00000495756 GOLGA6AQ9NYA3 693 aa19.67■□□□□ 0.74
ATG3-208ENST00000495756 DLGAP2Q9P1A6 1054 aa19.67■□□□□ 0.74
ATG3-208ENST00000495756 SARDHQ9UL12 918 aa19.67■□□□□ 0.74
ATG3-208ENST00000495756 ERI2A8K979 691 aaKnown RBP19.67■□□□□ 0.74
ATG3-208ENST00000495756 RNASEH1O60930 286 aaKnown RBP19.67■□□□□ 0.74
ATG3-208ENST00000495756 SOCS5O75159 536 aa19.67■□□□□ 0.74
ATG3-208ENST00000495756 AP2A1O95782 977 aa19.67■□□□□ 0.74
ATG3-208ENST00000495756 IL1BP01584 269 aa19.67■□□□□ 0.74
ATG3-208ENST00000495756 APRTP07741 180 aa19.67■□□□□ 0.74
ATG3-208ENST00000495756 CLCN5P51795 746 aa19.67■□□□□ 0.74
ATG3-208ENST00000495756 DGKEP52429 567 aa19.67■□□□□ 0.74
ATG3-208ENST00000495756 SATB1Q01826 763 aa19.67■□□□□ 0.74
ATG3-208ENST00000495756 MTAPQ13126 283 aa19.67■□□□□ 0.74
ATG3-208ENST00000495756 PCSK7Q16549 785 aa19.67■□□□□ 0.74
ATG3-208ENST00000495756 SYCP2LQ5T4T6 812 aa19.67■□□□□ 0.74
ATG3-208ENST00000495756 DUPD1Q68J44 220 aa19.67■□□□□ 0.74
ATG3-208ENST00000495756 CCDC70Q6NSX1 233 aa19.67■□□□□ 0.74
ATG3-208ENST00000495756 IPMKQ8NFU5 416 aa19.67■□□□□ 0.74
ATG3-208ENST00000495756 PIP4K2CQ8TBX8 421 aa19.67■□□□□ 0.74
ATG3-208ENST00000495756 MRGPRX2Q96LB1 330 aa19.67■□□□□ 0.74
ATG3-208ENST00000495756 COL25A1Q9BXS0 654 aaPredicted RBP19.67■□□□□ 0.74
ATG3-208ENST00000495756 SUV39H2Q9H5I1 410 aa19.67■□□□□ 0.74
ATG3-208ENST00000495756 ZDBF2Q9HCK1 2354 aa19.66■□□□□ 0.74
ATG3-208ENST00000495756 TRAFD1O14545 582 aaPredicted RBP19.66■□□□□ 0.74
ATG3-208ENST00000495756 DNALI1O14645 258 aaPredicted RBP19.66■□□□□ 0.74
ATG3-208ENST00000495756 PSMD3O43242 534 aa19.66■□□□□ 0.74
ATG3-208ENST00000495756 HTRA2O43464 458 aaPredicted RBP19.66■□□□□ 0.74
ATG3-208ENST00000495756 HEXIM1O94992 359 aaKnown RBP19.66■□□□□ 0.74
ATG3-208ENST00000495756 CA4P22748 312 aa19.66■□□□□ 0.74
ATG3-208ENST00000495756 MAGEA6P43360 314 aa19.66■□□□□ 0.74
ATG3-208ENST00000495756 RPL21P46778 160 aaKnown RBP19.66■□□□□ 0.74
ATG3-208ENST00000495756 LMAN1P49257 510 aa19.66■□□□□ 0.74
ATG3-208ENST00000495756 TERF1P54274 439 aa19.66■□□□□ 0.74
ATG3-208ENST00000495756 TEX35Q5T0J7 233 aa19.66■□□□□ 0.74
ATG3-208ENST00000495756 PDCD6IPQ8WUM4 868 aaKnown RBP19.66■□□□□ 0.74
ATG3-208ENST00000495756 CPT1BQ92523 772 aa19.66■□□□□ 0.74
ATG3-208ENST00000495756 SNF8Q96H20 258 aa19.66■□□□□ 0.74
ATG3-208ENST00000495756 FEM1CQ96JP0 617 aa19.66■□□□□ 0.74
ATG3-208ENST00000495756 KLHL32Q96NJ5 620 aa19.66■□□□□ 0.74
ATG3-208ENST00000495756 HINFPQ9BQA5 517 aa19.66■□□□□ 0.74
ATG3-208ENST00000495756 LRRC40Q9H9A6 602 aa19.66■□□□□ 0.74
ATG3-208ENST00000495756 POLMQ9NP87 494 aaPredicted RBP19.66■□□□□ 0.74
ATG3-208ENST00000495756 EIF2B3Q9NR50 452 aaKnown RBP19.66■□□□□ 0.74
ATG3-208ENST00000495756 DMGDHQ9UI17 866 aaKnown RBP19.66■□□□□ 0.74
ATG3-208ENST00000495756 TPX2Q9ULW0 747 aaKnown RBP19.66■□□□□ 0.74
ATG3-208ENST00000495756 SNX24Q9Y343 169 aa19.66■□□□□ 0.74
ATG3-208ENST00000495756 ARIH1Q9Y4X5 557 aaPredicted RBP19.66■□□□□ 0.74
ATG3-208ENST00000495756 TCRBV21S2A2A0A5A6 115 aa19.65■□□□□ 0.74
ATG3-208ENST00000495756 C1QTNF3-AMACRE9PGA6 284 aa19.65■□□□□ 0.74
ATG3-208ENST00000495756 KPNA3O00505 521 aaPredicted RBP19.65■□□□□ 0.74
ATG3-208ENST00000495756 FZD6O60353 706 aa19.65■□□□□ 0.74
ATG3-208ENST00000495756 RHOXF2BP0C7M4 288 aa19.65■□□□□ 0.74
ATG3-208ENST00000495756 C7P10643 843 aa19.65■□□□□ 0.74
ATG3-208ENST00000495756 PSMD8P48556 350 aa19.65■□□□□ 0.74
ATG3-208ENST00000495756 RPS14P62263 151 aaKnown RBP19.65■□□□□ 0.74
ATG3-208ENST00000495756 TUBB4BP68371 445 aa19.65■□□□□ 0.74
ATG3-208ENST00000495756 CDK18Q07002 472 aa19.65■□□□□ 0.74
ATG3-208ENST00000495756 KCNJ11Q14654 390 aa19.65■□□□□ 0.74
ATG3-208ENST00000495756 CST6Q15828 149 aa19.65■□□□□ 0.74
ATG3-208ENST00000495756 ZNF805Q5CZA5 627 aa19.65■□□□□ 0.74
ATG3-208ENST00000495756 ARMC12Q5T9G4 340 aa19.65■□□□□ 0.74
ATG3-208ENST00000495756 FAM46CQ5VWP2 391 aa19.65■□□□□ 0.74
ATG3-208ENST00000495756 IZUMO3Q5VZ72 239 aa19.65■□□□□ 0.74
ATG3-208ENST00000495756 ZNF776Q68DI1 518 aaPredicted RBP19.65■□□□□ 0.74
ATG3-208ENST00000495756 KDELC2Q7Z4H8 507 aa19.65■□□□□ 0.74
ATG3-208ENST00000495756 TMPRSS6Q8IU80 811 aa19.65■□□□□ 0.74
ATG3-208ENST00000495756 ECHDC3Q96DC8 303 aa19.65■□□□□ 0.74
ATG3-208ENST00000495756 IFT43Q96FT9 208 aa19.65■□□□□ 0.74
ATG3-208ENST00000495756 TRIB3Q96RU7 358 aa19.65■□□□□ 0.74
ATG3-208ENST00000495756 RHOXF2Q9BQY4 288 aa19.65■□□□□ 0.74
ATG3-208ENST00000495756 FSD1LQ9BXM9 530 aa19.65■□□□□ 0.74
ATG3-208ENST00000495756 DPH5Q9H2P9 285 aa19.65■□□□□ 0.74
ATG3-208ENST00000495756 CHKBQ9Y259 395 aa19.65■□□□□ 0.74
ATG3-208ENST00000495756 PCDHB9Q9Y5E1 797 aa19.65■□□□□ 0.74
ATG3-208ENST00000495756 LOC285095A0A1B0GVY8 99 aa19.64■□□□□ 0.73
ATG3-208ENST00000495756 TNFRSF10AO00220 468 aa19.64■□□□□ 0.73
ATG3-208ENST00000495756 SUN1O94901 812 aa19.64■□□□□ 0.73
ATG3-208ENST00000495756 SEC31AO94979 1220 aaKnown RBP19.64■□□□□ 0.73
ATG3-208ENST00000495756 PGLSO95336 258 aa19.64■□□□□ 0.73
ATG3-208ENST00000495756 ADH1BP00325 375 aa19.64■□□□□ 0.73
ATG3-208ENST00000495756 EPOP01588 193 aa19.64■□□□□ 0.73
ATG3-208ENST00000495756 PDHA1P08559 390 aa19.64■□□□□ 0.73
ATG3-208ENST00000495756 TPSB2P20231 275 aa19.64■□□□□ 0.73
ATG3-208ENST00000495756 ADRA1AP35348 466 aa19.64■□□□□ 0.73
ATG3-208ENST00000495756 METAP1P53582 386 aa19.64■□□□□ 0.73
ATG3-208ENST00000495756 GUCY2DQ02846 1103 aa19.64■□□□□ 0.73
ATG3-208ENST00000495756 SPARCL1Q14515 664 aa19.64■□□□□ 0.73
ATG3-208ENST00000495756 TPSAB1Q15661 275 aa19.64■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms