RNA–Protein interactions for RNA: ENST00000494465.5

ATG4B-225, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 2,365 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-225ENST00000494465 NUDCD3Q8IVD9 361 aa16.68■□□□□ 0.26
ATG4B-225ENST00000494465 MFSD6LQ8IWD5 586 aa16.68■□□□□ 0.26
ATG4B-225ENST00000494465 BBS5Q8N3I7 341 aa16.68■□□□□ 0.26
ATG4B-225ENST00000494465 HJURPQ8NCD3 748 aaPredicted RBP16.68■□□□□ 0.26
ATG4B-225ENST00000494465 C2CD4AQ8NCU7 369 aaPredicted RBP16.68■□□□□ 0.26
ATG4B-225ENST00000494465 PLCD4Q9BRC7 762 aa16.68■□□□□ 0.26
ATG4B-225ENST00000494465 MUC3BQ9H195 1237 aa16.68■□□□□ 0.26
ATG4B-225ENST00000494465 A0A1W2PRU2 124 aa16.67■□□□□ 0.26
ATG4B-225ENST00000494465 TLL1O43897 1013 aa16.67■□□□□ 0.26
ATG4B-225ENST00000494465 SNAP91O60641 907 aa16.67■□□□□ 0.26
ATG4B-225ENST00000494465 CSPG5O95196 566 aa16.67■□□□□ 0.26
ATG4B-225ENST00000494465 MPOP05164 745 aa16.67■□□□□ 0.26
ATG4B-225ENST00000494465 C2P06681 752 aa16.67■□□□□ 0.26
ATG4B-225ENST00000494465 HLA-DPA1P20036 260 aa16.67■□□□□ 0.26
ATG4B-225ENST00000494465 IRX4P78413 519 aa16.67■□□□□ 0.26
ATG4B-225ENST00000494465 PLPP4Q5VZY2 271 aa16.67■□□□□ 0.26
ATG4B-225ENST00000494465 HTR3DQ70Z44 454 aa16.67■□□□□ 0.26
ATG4B-225ENST00000494465 SPRED2Q7Z698 418 aa16.67■□□□□ 0.26
ATG4B-225ENST00000494465 CARNMT1Q8N4J0 409 aa16.67■□□□□ 0.26
ATG4B-225ENST00000494465 FITM2Q8N6M3 262 aa16.67■□□□□ 0.26
ATG4B-225ENST00000494465 E2F7Q96AV8 911 aa16.67■□□□□ 0.26
ATG4B-225ENST00000494465 ALG14Q96F25 216 aa16.67■□□□□ 0.26
ATG4B-225ENST00000494465 EXOC2Q96KP1 924 aa16.67■□□□□ 0.26
ATG4B-225ENST00000494465 EMILIN2Q9BXX0 1053 aa16.67■□□□□ 0.26
ATG4B-225ENST00000494465 SLC4A7Q9Y6M7 1214 aa16.67■□□□□ 0.26
ATG4B-225ENST00000494465 A0A096LPK6 155 aa16.67■□□□□ 0.26
ATG4B-225ENST00000494465 LUC7L3O95232 432 aaKnown RBP16.67■□□□□ 0.26
ATG4B-225ENST00000494465 GLUD1P00367 558 aa16.67■□□□□ 0.26
ATG4B-225ENST00000494465 FGF1P05230 155 aa16.67■□□□□ 0.26
ATG4B-225ENST00000494465 CKMP06732 381 aa16.67■□□□□ 0.26
ATG4B-225ENST00000494465 HSPA1AP0DMV8 641 aaKnown RBP16.67■□□□□ 0.26
ATG4B-225ENST00000494465 HSPA1BP0DMV9 641 aaKnown RBP16.67■□□□□ 0.26
ATG4B-225ENST00000494465 NEFHP12036 1026 aa16.67■□□□□ 0.26
ATG4B-225ENST00000494465 CTNNB1P35222 781 aa16.67■□□□□ 0.26
ATG4B-225ENST00000494465 HADHAP40939 763 aa16.67■□□□□ 0.26
ATG4B-225ENST00000494465 CCR2P41597 374 aa16.67■□□□□ 0.26
ATG4B-225ENST00000494465 CLCN4P51793 760 aa16.67■□□□□ 0.26
ATG4B-225ENST00000494465 IRF9Q00978 393 aa16.67■□□□□ 0.26
ATG4B-225ENST00000494465 BST1Q10588 318 aa16.67■□□□□ 0.26
ATG4B-225ENST00000494465 GALNT3Q14435 633 aa16.67■□□□□ 0.26
ATG4B-225ENST00000494465 CHI3L2Q15782 390 aa16.67■□□□□ 0.26
ATG4B-225ENST00000494465 ZNF470Q6ECI4 717 aa16.67■□□□□ 0.26
ATG4B-225ENST00000494465 NEPROQ6NW34 567 aa16.67■□□□□ 0.26
ATG4B-225ENST00000494465 SPPL3Q8TCT6 385 aa16.67■□□□□ 0.26
ATG4B-225ENST00000494465 TMA16Q96EY4 203 aaKnown RBP16.67■□□□□ 0.26
ATG4B-225ENST00000494465 IFT43Q96FT9 208 aa16.67■□□□□ 0.26
ATG4B-225ENST00000494465 FEM1AQ9BSK4 669 aa16.67■□□□□ 0.26
ATG4B-225ENST00000494465 NPHS2Q9NP85 383 aa16.67■□□□□ 0.26
ATG4B-225ENST00000494465 SLC39A10Q9ULF5 831 aa16.67■□□□□ 0.26
ATG4B-225ENST00000494465 KCTD3Q9Y597 815 aa16.67■□□□□ 0.26
ATG4B-225ENST00000494465 NOTCH4Q99466 2003 aa16.67■□□□□ 0.26
ATG4B-225ENST00000494465 MYO7AQ13402 2215 aa16.67■□□□□ 0.26
ATG4B-225ENST00000494465 H0Y626 953 aa16.66■□□□□ 0.26
ATG4B-225ENST00000494465 CCL16O15467 120 aa16.66■□□□□ 0.26
ATG4B-225ENST00000494465 ARSDP51689 593 aa16.66■□□□□ 0.26
ATG4B-225ENST00000494465 PGGT1BP53609 377 aa16.66■□□□□ 0.26
ATG4B-225ENST00000494465 THOC5Q13769 683 aaKnown RBP16.66■□□□□ 0.26
ATG4B-225ENST00000494465 PCLAFQ15004 111 aa16.66■□□□□ 0.26
ATG4B-225ENST00000494465 DBN1Q16643 649 aa16.66■□□□□ 0.26
ATG4B-225ENST00000494465 UGP2Q16851 508 aa16.66■□□□□ 0.26
ATG4B-225ENST00000494465 GALNTL6Q49A17 601 aa16.66■□□□□ 0.26
ATG4B-225ENST00000494465 TRIM42Q8IWZ5 723 aa16.66■□□□□ 0.26
ATG4B-225ENST00000494465 RAB3IL1Q8TBN0 382 aa16.66■□□□□ 0.26
ATG4B-225ENST00000494465 POF1BQ8WVV4 589 aa16.66■□□□□ 0.26
ATG4B-225ENST00000494465 CORO1BQ9BR76 489 aa16.66■□□□□ 0.26
ATG4B-225ENST00000494465 FAM167BQ9BTA0 163 aa16.66■□□□□ 0.26
ATG4B-225ENST00000494465 SLC46A2Q9BY10 475 aa16.66■□□□□ 0.26
ATG4B-225ENST00000494465 C20orf27Q9GZN8 174 aa16.66■□□□□ 0.26
ATG4B-225ENST00000494465 HAUS2Q9NVX0 235 aa16.66■□□□□ 0.26
ATG4B-225ENST00000494465 HCFC1R1Q9NWW0 138 aa16.66■□□□□ 0.26
ATG4B-225ENST00000494465 CFAP97Q9P2B7 532 aa16.66■□□□□ 0.26
ATG4B-225ENST00000494465 FBXO5Q9UKT4 447 aa16.66■□□□□ 0.26
ATG4B-225ENST00000494465 CCDC195A0A1B0GUA6 201 aa16.66■□□□□ 0.26
ATG4B-225ENST00000494465 AURKAO14965 403 aa16.66■□□□□ 0.26
ATG4B-225ENST00000494465 INSIG1O15503 277 aa16.66■□□□□ 0.26
ATG4B-225ENST00000494465 SNNO75324 88 aaPredicted RBP16.66■□□□□ 0.26
ATG4B-225ENST00000494465 NDST3O95803 873 aa16.66■□□□□ 0.26
ATG4B-225ENST00000494465 GSTA1P08263 222 aa16.66■□□□□ 0.26
ATG4B-225ENST00000494465 CDC25CP30307 473 aa16.66■□□□□ 0.26
ATG4B-225ENST00000494465 ALDH3A1P30838 453 aa16.66■□□□□ 0.26
ATG4B-225ENST00000494465 SCNN1BP51168 640 aa16.66■□□□□ 0.26
ATG4B-225ENST00000494465 OCRLQ01968 901 aa16.66■□□□□ 0.26
ATG4B-225ENST00000494465 ACVR1Q04771 509 aa16.66■□□□□ 0.26
ATG4B-225ENST00000494465 FASTKD1Q53R41 847 aaKnown RBP16.66■□□□□ 0.26
ATG4B-225ENST00000494465 LINGO4Q6UY18 593 aa16.66■□□□□ 0.26
ATG4B-225ENST00000494465 RNF135Q8IUD6 432 aa16.66■□□□□ 0.26
ATG4B-225ENST00000494465 BBS7Q8IWZ6 715 aa16.66■□□□□ 0.26
ATG4B-225ENST00000494465 RFWD2Q8NHY2 731 aa16.66■□□□□ 0.26
ATG4B-225ENST00000494465 PHOSPHO2Q8TCD6 241 aa16.66■□□□□ 0.26
ATG4B-225ENST00000494465 ZNF395Q9H8N7 513 aaPredicted RBP16.66■□□□□ 0.26
ATG4B-225ENST00000494465 DNMT3BQ9UBC3 853 aaKnown RBP16.66■□□□□ 0.26
ATG4B-225ENST00000494465 SLC12A4Q9UP95 1085 aa16.66■□□□□ 0.26
ATG4B-225ENST00000494465 USH1CQ9Y6N9 552 aa16.66■□□□□ 0.26
ATG4B-225ENST00000494465 TMCC1O94876 653 aa16.65■□□□□ 0.26
ATG4B-225ENST00000494465 UBOX5O94941 541 aa16.65■□□□□ 0.26
ATG4B-225ENST00000494465 TGDSO95455 350 aa16.65■□□□□ 0.26
ATG4B-225ENST00000494465 PRLP01236 227 aa16.65■□□□□ 0.26
ATG4B-225ENST00000494465 MYL4P12829 197 aa16.65■□□□□ 0.26
ATG4B-225ENST00000494465 LIG3P49916 1009 aa16.65■□□□□ 0.26
ATG4B-225ENST00000494465 TMPRSS15P98073 1019 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms