RNA–Protein interactions for RNA: ENST00000494090.6

COL27A1-207, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 5,329 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-207ENST00000494090 WFS1O76024 890 aa19.3■□□□□ 0.68
COL27A1-207ENST00000494090 NOL4O94818 638 aa19.3■□□□□ 0.68
COL27A1-207ENST00000494090 NUDT14O95848 222 aa19.3■□□□□ 0.68
COL27A1-207ENST00000494090 MATKP42679 507 aa19.3■□□□□ 0.68
COL27A1-207ENST00000494090 COPZ1P61923 177 aa19.3■□□□□ 0.68
COL27A1-207ENST00000494090 NRF1Q16656 503 aa19.3■□□□□ 0.68
COL27A1-207ENST00000494090 LIPMQ5VYY2 423 aa19.3■□□□□ 0.68
COL27A1-207ENST00000494090 DCLRE1AQ6PJP8 1040 aa19.3■□□□□ 0.68
COL27A1-207ENST00000494090 COLGALT2Q8IYK4 626 aa19.3■□□□□ 0.68
COL27A1-207ENST00000494090 SELENOMQ8WWX9 145 aa19.3■□□□□ 0.68
COL27A1-207ENST00000494090 SPATA5L1Q9BVQ7 753 aa19.3■□□□□ 0.68
COL27A1-207ENST00000494090 GRIP2Q9C0E4 1043 aa19.3■□□□□ 0.68
COL27A1-207ENST00000494090 A0A1W2PPM1 405 aa19.3■□□□□ 0.68
COL27A1-207ENST00000494090 BCLAF3A2AJT9 711 aaKnown RBP19.3■□□□□ 0.68
COL27A1-207ENST00000494090 SMARCB1Q12824 385 aa19.3■□□□□ 0.68
COL27A1-207ENST00000494090 CXCL17Q6UXB2 119 aa19.3■□□□□ 0.68
COL27A1-207ENST00000494090 C8orf59Q8N0T1 100 aaPredicted RBP19.3■□□□□ 0.68
COL27A1-207ENST00000494090 ELMO1Q92556 727 aa19.3■□□□□ 0.68
COL27A1-207ENST00000494090 PTCD3Q96EY7 689 aaKnown RBP19.3■□□□□ 0.68
COL27A1-207ENST00000494090 ZNF510Q9Y2H8 683 aa19.3■□□□□ 0.68
COL27A1-207ENST00000494090 ASGR1P07306 291 aa19.3■□□□□ 0.68
COL27A1-207ENST00000494090 ENO2P09104 434 aaPredicted RBP19.3■□□□□ 0.68
COL27A1-207ENST00000494090 ZNF24P17028 368 aa19.3■□□□□ 0.68
COL27A1-207ENST00000494090 TOP3AQ13472 1001 aaPredicted RBP19.3■□□□□ 0.68
COL27A1-207ENST00000494090 UBAP2LQ14157 1087 aaKnown RBP19.3■□□□□ 0.68
COL27A1-207ENST00000494090 FAM46CQ5VWP2 391 aa19.3■□□□□ 0.68
COL27A1-207ENST00000494090 AAGABQ6PD74 315 aa19.3■□□□□ 0.68
COL27A1-207ENST00000494090 TPGS1Q6ZTW0 290 aa19.3■□□□□ 0.68
COL27A1-207ENST00000494090 FIBCD1Q8N539 461 aa19.3■□□□□ 0.68
COL27A1-207ENST00000494090 NUDT5Q9UKK9 219 aa19.3■□□□□ 0.68
COL27A1-207ENST00000494090 CORO2BQ9UQ03 480 aa19.3■□□□□ 0.68
COL27A1-207ENST00000494090 URADA6NGE7 173 aa19.3■□□□□ 0.68
COL27A1-207ENST00000494090 C21orf59P57076 290 aa19.3■□□□□ 0.68
COL27A1-207ENST00000494090 SLC20A2Q08357 652 aa19.3■□□□□ 0.68
COL27A1-207ENST00000494090 RAP1GAP2Q684P5 730 aa19.3■□□□□ 0.68
COL27A1-207ENST00000494090 PAGE2Q7Z2X7 111 aa19.3■□□□□ 0.68
COL27A1-207ENST00000494090 SENP6Q9GZR1 1112 aaPredicted RBP19.3■□□□□ 0.68
COL27A1-207ENST00000494090 TRIT1Q9H3H1 467 aaKnown RBP19.3■□□□□ 0.68
COL27A1-207ENST00000494090 REEP1Q9H902 201 aa19.3■□□□□ 0.68
COL27A1-207ENST00000494090 LEF1Q9UJU2 399 aaPredicted RBP19.3■□□□□ 0.68
COL27A1-207ENST00000494090 PNMA8CA0A1B0GUJ8 204 aa19.29■□□□□ 0.68
COL27A1-207ENST00000494090 MYL12BO14950 172 aa19.29■□□□□ 0.68
COL27A1-207ENST00000494090 ARMC4Q5T2S8 1044 aa19.29■□□□□ 0.68
COL27A1-207ENST00000494090 TTC27Q6P3X3 843 aa19.29■□□□□ 0.68
COL27A1-207ENST00000494090 KCTD4Q8WVF5 259 aa19.29■□□□□ 0.68
COL27A1-207ENST00000494090 DERAQ9Y315 318 aa19.29■□□□□ 0.68
COL27A1-207ENST00000494090 OR6C75A6NL08 312 aa19.29■□□□□ 0.68
COL27A1-207ENST00000494090 PTGES3LE9PB15 166 aa19.29■□□□□ 0.68
COL27A1-207ENST00000494090 SP3Q02447 781 aa19.29■□□□□ 0.68
COL27A1-207ENST00000494090 ATP1A4Q13733 1029 aa19.29■□□□□ 0.68
COL27A1-207ENST00000494090 ULK2Q8IYT8 1036 aa19.29■□□□□ 0.68
COL27A1-207ENST00000494090 MARK4Q96L34 752 aa19.29■□□□□ 0.68
COL27A1-207ENST00000494090 PPP3R2Q96LZ3 170 aa19.29■□□□□ 0.68
COL27A1-207ENST00000494090 FGFBP2Q9BYJ0 223 aa19.29■□□□□ 0.68
COL27A1-207ENST00000494090 SNX15Q9NRS6 342 aa19.29■□□□□ 0.68
COL27A1-207ENST00000494090 MRPS23Q9Y3D9 190 aaKnown RBP19.29■□□□□ 0.68
COL27A1-207ENST00000494090 TFEBP19484 476 aa19.29■□□□□ 0.68
COL27A1-207ENST00000494090 PDK3Q15120 406 aa19.29■□□□□ 0.68
COL27A1-207ENST00000494090 ZNF605Q86T29 641 aa19.29■□□□□ 0.68
COL27A1-207ENST00000494090 NACC2Q96BF6 587 aa19.29■□□□□ 0.68
COL27A1-207ENST00000494090 LGMNQ99538 433 aa19.29■□□□□ 0.68
COL27A1-207ENST00000494090 GRM5P41594 1212 aa19.29■□□□□ 0.68
COL27A1-207ENST00000494090 GRIA3P42263 894 aa19.29■□□□□ 0.68
COL27A1-207ENST00000494090 TNK2Q07912 1038 aa19.29■□□□□ 0.68
COL27A1-207ENST00000494090 PACS1Q6VY07 963 aa19.29■□□□□ 0.68
COL27A1-207ENST00000494090 SMAD5Q99717 465 aaKnown RBP19.29■□□□□ 0.68
COL27A1-207ENST00000494090 LRRC4CQ9HCJ2 640 aa19.29■□□□□ 0.68
COL27A1-207ENST00000494090 FGF19O95750 216 aa19.28■□□□□ 0.68
COL27A1-207ENST00000494090 FGFR3P22607 806 aa19.28■□□□□ 0.68
COL27A1-207ENST00000494090 TIMM50Q3ZCQ8 353 aa19.28■□□□□ 0.68
COL27A1-207ENST00000494090 TOP6BLQ8N6T0 577 aa19.28■□□□□ 0.68
COL27A1-207ENST00000494090 MFSD1Q9H3U5 465 aa19.28■□□□□ 0.68
COL27A1-207ENST00000494090 IGFLR1Q9H665 355 aa19.28■□□□□ 0.68
COL27A1-207ENST00000494090 ZMPSTE24O75844 475 aa19.28■□□□□ 0.68
COL27A1-207ENST00000494090 MMP8P22894 467 aa19.28■□□□□ 0.68
COL27A1-207ENST00000494090 MRPS5P82675 430 aaKnown RBP19.28■□□□□ 0.68
COL27A1-207ENST00000494090 INO80DQ53TQ3 878 aaPredicted RBP19.28■□□□□ 0.68
COL27A1-207ENST00000494090 TRIQKQ629K1 86 aa19.28■□□□□ 0.68
COL27A1-207ENST00000494090 TBCDQ9BTW9 1192 aa19.28■□□□□ 0.68
COL27A1-207ENST00000494090 MRPL42Q9Y6G3 142 aaKnown RBP19.28■□□□□ 0.68
COL27A1-207ENST00000494090 ERCC2P18074 760 aa19.28■□□□□ 0.68
COL27A1-207ENST00000494090 QPCTQ16769 361 aa19.28■□□□□ 0.68
COL27A1-207ENST00000494090 TTC7BQ86TV6 843 aa19.28■□□□□ 0.68
COL27A1-207ENST00000494090 C6orf62Q9GZU0 229 aaPredicted RBP19.28■□□□□ 0.68
COL27A1-207ENST00000494090 KLQ9UEF7 1012 aa19.28■□□□□ 0.68
COL27A1-207ENST00000494090 COL1A2P08123 1366 aa19.28■□□□□ 0.68
COL27A1-207ENST00000494090 DYTNA2CJ06 578 aa19.28■□□□□ 0.68
COL27A1-207ENST00000494090 PPP1R11O60927 126 aaPredicted RBP19.28■□□□□ 0.68
COL27A1-207ENST00000494090 COX10Q12887 443 aa19.28■□□□□ 0.68
COL27A1-207ENST00000494090 TTC23Q5W5X9 447 aa19.28■□□□□ 0.68
COL27A1-207ENST00000494090 SH3BP5LQ7L8J4 393 aa19.28■□□□□ 0.68
COL27A1-207ENST00000494090 ARHGAP22Q7Z5H3 698 aa19.28■□□□□ 0.68
COL27A1-207ENST00000494090 MAF1Q9H063 256 aa19.28■□□□□ 0.68
COL27A1-207ENST00000494090 PCDH18Q9HCL0 1135 aa19.28■□□□□ 0.68
COL27A1-207ENST00000494090 PRPF19Q9UMS4 504 aaKnown RBP19.28■□□□□ 0.68
COL27A1-207ENST00000494090 HES2Q9Y543 173 aa19.28■□□□□ 0.68
COL27A1-207ENST00000494090 BCL9LQ86UU0 1499 aa19.28■□□□□ 0.68
COL27A1-207ENST00000494090 NDUFS2O75306 463 aa19.27■□□□□ 0.68
COL27A1-207ENST00000494090 UMPSP11172 480 aa19.27■□□□□ 0.68
COL27A1-207ENST00000494090 TXNDC11Q6PKC3 985 aa19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms