RNA–Protein interactions for RNA: ENST00000494065.2

DEPDC5-220, Transcript of DEP domain containing 5, humanhuman

TSL 3

Gene DEPDC5, Length 414 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC5-220ENST00000494065 CDK4P11802 303 aa8.21□□□□□ -1.1
DEPDC5-220ENST00000494065 SRCP12931 536 aa8.21□□□□□ -1.1
DEPDC5-220ENST00000494065 VAV1P15498 845 aa8.21□□□□□ -1.1
DEPDC5-220ENST00000494065 DESP17661 470 aa8.21□□□□□ -1.1
DEPDC5-220ENST00000494065 EPHA8P29322 1005 aaPredicted RBP8.21□□□□□ -1.1
DEPDC5-220ENST00000494065 SDC4P31431 198 aa8.21□□□□□ -1.1
DEPDC5-220ENST00000494065 FLT3P36888 993 aa8.21□□□□□ -1.1
DEPDC5-220ENST00000494065 ADKP55263 362 aaKnown RBP8.21□□□□□ -1.1
DEPDC5-220ENST00000494065 GEMIN4P57678 1058 aaKnown RBP8.21□□□□□ -1.1
DEPDC5-220ENST00000494065 NXPH1P58417 271 aa8.21□□□□□ -1.1
DEPDC5-220ENST00000494065 PPP2CBP62714 309 aa8.21□□□□□ -1.1
DEPDC5-220ENST00000494065 PPP2CAP67775 309 aa8.21□□□□□ -1.1
DEPDC5-220ENST00000494065 IL9RQ01113 521 aa8.21□□□□□ -1.1
DEPDC5-220ENST00000494065 CDR2Q01850 454 aa8.21□□□□□ -1.1
DEPDC5-220ENST00000494065 KCNMA1Q12791 1236 aa8.21□□□□□ -1.1
DEPDC5-220ENST00000494065 ARL13BQ3SXY8 428 aa8.21□□□□□ -1.1
DEPDC5-220ENST00000494065 ELOA3BQ3SY89 546 aa8.21□□□□□ -1.1
DEPDC5-220ENST00000494065 TBC1D3GQ6DHY5 549 aa8.21□□□□□ -1.1
DEPDC5-220ENST00000494065 TBC1D3CQ6IPX1 549 aa8.21□□□□□ -1.1
DEPDC5-220ENST00000494065 DPY19L2P1Q6NXN4 242 aa8.21□□□□□ -1.1
DEPDC5-220ENST00000494065 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP8.21□□□□□ -1.1
DEPDC5-220ENST00000494065 TFAP2DQ7Z6R9 452 aa8.21□□□□□ -1.1
DEPDC5-220ENST00000494065 C14orf80Q86SX3 495 aa8.21□□□□□ -1.1
DEPDC5-220ENST00000494065 ZNF683Q8IZ20 524 aa8.21□□□□□ -1.1
DEPDC5-220ENST00000494065 TBC1D3Q8IZP1 549 aaPredicted RBP8.21□□□□□ -1.1
DEPDC5-220ENST00000494065 MFSD2AQ8NA29 543 aa8.21□□□□□ -1.1
DEPDC5-220ENST00000494065 ATP11CQ8NB49 1132 aa8.21□□□□□ -1.1
DEPDC5-220ENST00000494065 GALNT6Q8NCL4 622 aa8.21□□□□□ -1.1
DEPDC5-220ENST00000494065 ELOA3Q8NG57 546 aa8.21□□□□□ -1.1
DEPDC5-220ENST00000494065 ANKRD7Q92527 254 aa8.21□□□□□ -1.1
DEPDC5-220ENST00000494065 ERGIC2Q96RQ1 377 aa8.21□□□□□ -1.1
DEPDC5-220ENST00000494065 PSMB7Q99436 277 aa8.21□□□□□ -1.1
DEPDC5-220ENST00000494065 ZYG11BQ9C0D3 744 aa8.21□□□□□ -1.1
DEPDC5-220ENST00000494065 CEP44Q9C0F1 390 aa8.21□□□□□ -1.1
DEPDC5-220ENST00000494065 RETREG1Q9H6L5 497 aa8.21□□□□□ -1.1
DEPDC5-220ENST00000494065 ERVMER34-1Q9H9K5 563 aa8.21□□□□□ -1.1
DEPDC5-220ENST00000494065 FAM207AQ9NSI2 230 aaPredicted RBP8.21□□□□□ -1.1
DEPDC5-220ENST00000494065 ARGLU1Q9NWB6 273 aaPredicted RBP8.21□□□□□ -1.1
DEPDC5-220ENST00000494065 NOCTQ9UK39 431 aaKnown RBP8.21□□□□□ -1.1
DEPDC5-220ENST00000494065 PPM1HQ9ULR3 514 aa8.21□□□□□ -1.1
DEPDC5-220ENST00000494065 CAPN11Q9UMQ6 739 aa8.21□□□□□ -1.1
DEPDC5-220ENST00000494065 BTBD3Q9Y2F9 522 aa8.21□□□□□ -1.1
DEPDC5-220ENST00000494065 PCDHGA1Q9Y5H4 931 aa8.21□□□□□ -1.1
DEPDC5-220ENST00000494065 A0A1W2PR77 199 aa8.2□□□□□ -1.1
DEPDC5-220ENST00000494065 SOWAHDA6NJG2 315 aa8.2□□□□□ -1.1
DEPDC5-220ENST00000494065 DRGXA6NNA5 263 aa8.2□□□□□ -1.1
DEPDC5-220ENST00000494065 PRAMEF26H0Y7S4 382 aa8.2□□□□□ -1.1
DEPDC5-220ENST00000494065 TLR4O00206 839 aa8.2□□□□□ -1.1
DEPDC5-220ENST00000494065 KPNA3O00505 521 aaPredicted RBP8.2□□□□□ -1.1
DEPDC5-220ENST00000494065 SNAP91O60641 907 aa8.2□□□□□ -1.1
DEPDC5-220ENST00000494065 RNGTTO60942 597 aaKnown RBP8.2□□□□□ -1.1
DEPDC5-220ENST00000494065 RTN2O75298 545 aa8.2□□□□□ -1.1
DEPDC5-220ENST00000494065 CNTN5O94779 1100 aa8.2□□□□□ -1.1
DEPDC5-220ENST00000494065 GFPT2O94808 682 aa8.2□□□□□ -1.1
DEPDC5-220ENST00000494065 PDGFAP04085 211 aa8.2□□□□□ -1.1
DEPDC5-220ENST00000494065 CALB1P05937 261 aa8.2□□□□□ -1.1
DEPDC5-220ENST00000494065 PCSK2P16519 638 aa8.2□□□□□ -1.1
DEPDC5-220ENST00000494065 TFE3P19532 575 aaPredicted RBP8.2□□□□□ -1.1
DEPDC5-220ENST00000494065 NFKB1P19838 968 aa8.2□□□□□ -1.1
DEPDC5-220ENST00000494065 MMP8P22894 467 aa8.2□□□□□ -1.1
DEPDC5-220ENST00000494065 OR1E1P30953 314 aa8.2□□□□□ -1.1
DEPDC5-220ENST00000494065 CHRNA3P32297 505 aa8.2□□□□□ -1.1
DEPDC5-220ENST00000494065 SOX5P35711 763 aa8.2□□□□□ -1.1
DEPDC5-220ENST00000494065 STAT1P42224 750 aa8.2□□□□□ -1.1
DEPDC5-220ENST00000494065 NSFP46459 744 aaKnown RBP8.2□□□□□ -1.1
DEPDC5-220ENST00000494065 MAPKAPK2P49137 400 aa8.2□□□□□ -1.1
DEPDC5-220ENST00000494065 NUMBP49757 651 aa8.2□□□□□ -1.1
DEPDC5-220ENST00000494065 SERPINH1P50454 418 aaKnown RBP8.2□□□□□ -1.1
DEPDC5-220ENST00000494065 GSCP56915 257 aaPredicted RBP8.2□□□□□ -1.1
DEPDC5-220ENST00000494065 JAM2P57087 298 aa8.2□□□□□ -1.1
DEPDC5-220ENST00000494065 POLR2FP61218 127 aaKnown RBP8.2□□□□□ -1.1
DEPDC5-220ENST00000494065 GNG11P61952 73 aa8.2□□□□□ -1.1
DEPDC5-220ENST00000494065 ZBED6P86452 979 aa8.2□□□□□ -1.1
DEPDC5-220ENST00000494065 NRG1Q02297 640 aaPredicted RBP8.2□□□□□ -1.1
DEPDC5-220ENST00000494065 CNTN1Q12860 1018 aa8.2□□□□□ -1.1
DEPDC5-220ENST00000494065 PCSK7Q16549 785 aa8.2□□□□□ -1.1
DEPDC5-220ENST00000494065 ALFQ53S48 1182 aa8.2□□□□□ -1.1
DEPDC5-220ENST00000494065 NEK5Q6P3R8 708 aa8.2□□□□□ -1.1
DEPDC5-220ENST00000494065 XKR5Q6UX68 686 aa8.2□□□□□ -1.1
DEPDC5-220ENST00000494065 CCNI2Q6ZMN8 369 aaPredicted RBP8.2□□□□□ -1.1
DEPDC5-220ENST00000494065 STRADAQ7RTN6 431 aa8.2□□□□□ -1.1
DEPDC5-220ENST00000494065 TMPRSS7Q7RTY8 843 aa8.2□□□□□ -1.1
DEPDC5-220ENST00000494065 BNIPLQ7Z465 357 aa8.2□□□□□ -1.1
DEPDC5-220ENST00000494065 ATCAYQ86WG3 371 aa8.2□□□□□ -1.1
DEPDC5-220ENST00000494065 FAM131BQ86XD5 332 aa8.2□□□□□ -1.1
DEPDC5-220ENST00000494065 REXO1L1PQ8IX06 675 aa8.2□□□□□ -1.1
DEPDC5-220ENST00000494065 CCDC170Q8IYT3 715 aa8.2□□□□□ -1.1
DEPDC5-220ENST00000494065 PCDH20Q8N6Y1 951 aaKnown RBP8.2□□□□□ -1.1
DEPDC5-220ENST00000494065 PNPLA1Q8N8W4 532 aa8.2□□□□□ -1.1
DEPDC5-220ENST00000494065 TMIEQ8NEW7 156 aa8.2□□□□□ -1.1
DEPDC5-220ENST00000494065 NEK11Q8NG66 645 aa8.2□□□□□ -1.1
DEPDC5-220ENST00000494065 OR52K2Q8NGK3 314 aa8.2□□□□□ -1.1
DEPDC5-220ENST00000494065 GRIN3AQ8TCU5 1115 aa8.2□□□□□ -1.1
DEPDC5-220ENST00000494065 CFAP57Q96MR6 1250 aa8.2□□□□□ -1.1
DEPDC5-220ENST00000494065 DNAJC7Q99615 494 aa8.2□□□□□ -1.1
DEPDC5-220ENST00000494065 EDEM3Q9BZQ6 932 aa8.2□□□□□ -1.1
DEPDC5-220ENST00000494065 TSGA10Q9BZW7 698 aa8.2□□□□□ -1.1
DEPDC5-220ENST00000494065 CCDC86Q9H6F5 360 aaKnown RBP8.2□□□□□ -1.1
DEPDC5-220ENST00000494065 ATP13A1Q9HD20 1204 aa8.2□□□□□ -1.1
DEPDC5-220ENST00000494065 LUC7LQ9NQ29 371 aaKnown RBP8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 6.4 ms