RNA–Protein interactions for RNA: ENST00000494054.1

UFD1-210, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 5

Gene UFD1, Length 588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-210ENST00000494054 RNF8O76064 485 aa9.87□□□□□ -0.83
UFD1-210ENST00000494054 JUPP14923 745 aa9.87□□□□□ -0.83
UFD1-210ENST00000494054 DESP17661 470 aa9.87□□□□□ -0.83
UFD1-210ENST00000494054 ERCC2P18074 760 aa9.87□□□□□ -0.83
UFD1-210ENST00000494054 ACP1P24666 158 aa9.87□□□□□ -0.83
UFD1-210ENST00000494054 IL1R2P27930 398 aa9.87□□□□□ -0.83
UFD1-210ENST00000494054 HTR7P34969 479 aa9.87□□□□□ -0.83
UFD1-210ENST00000494054 RABIFP47224 123 aa9.87□□□□□ -0.83
UFD1-210ENST00000494054 NDST2P52849 883 aa9.87□□□□□ -0.83
UFD1-210ENST00000494054 PFN3P60673 137 aa9.87□□□□□ -0.83
UFD1-210ENST00000494054 RAD51Q06609 339 aa9.87□□□□□ -0.83
UFD1-210ENST00000494054 PDE1CQ14123 709 aaPredicted RBP9.87□□□□□ -0.83
UFD1-210ENST00000494054 KLHL40Q2TBA0 621 aa9.87□□□□□ -0.83
UFD1-210ENST00000494054 PPP6R3Q5H9R7 873 aaPredicted RBP9.87□□□□□ -0.83
UFD1-210ENST00000494054 HES3Q5TGS1 186 aa9.87□□□□□ -0.83
UFD1-210ENST00000494054 RFX8Q6ZV50 586 aa9.87□□□□□ -0.83
UFD1-210ENST00000494054 ZSCAN30Q86W11 494 aa9.87□□□□□ -0.83
UFD1-210ENST00000494054 DCP2Q8IU60 420 aaKnown RBP9.87□□□□□ -0.83
UFD1-210ENST00000494054 CAMK1DQ8IU85 385 aa9.87□□□□□ -0.83
UFD1-210ENST00000494054 NPWQ8N729 165 aa9.87□□□□□ -0.83
UFD1-210ENST00000494054 TSEN2Q8NCE0 465 aaKnown RBP9.87□□□□□ -0.83
UFD1-210ENST00000494054 OR4C6Q8NH72 309 aa9.87□□□□□ -0.83
UFD1-210ENST00000494054 FAM174AQ8TBP5 190 aa9.87□□□□□ -0.83
UFD1-210ENST00000494054 FNIP1Q8TF40 1166 aa9.87□□□□□ -0.83
UFD1-210ENST00000494054 IFT43Q96FT9 208 aa9.87□□□□□ -0.83
UFD1-210ENST00000494054 NSMCE3Q96MG7 304 aa9.87□□□□□ -0.83
UFD1-210ENST00000494054 WRAP53Q9BUR4 548 aaKnown RBP9.87□□□□□ -0.83
UFD1-210ENST00000494054 SUV39H2Q9H5I1 410 aa9.87□□□□□ -0.83
UFD1-210ENST00000494054 MBNL1Q9NR56 388 aaKnown RBP9.87□□□□□ -0.83
UFD1-210ENST00000494054 CWC15Q9P013 229 aaKnown RBP9.87□□□□□ -0.83
UFD1-210ENST00000494054 DKK3Q9UBP4 350 aa9.87□□□□□ -0.83
UFD1-210ENST00000494054 RAXQ9Y2V3 346 aa9.87□□□□□ -0.83
UFD1-210ENST00000494054 TDRD6O60522 2096 aaKnown RBP9.87□□□□□ -0.83
UFD1-210ENST00000494054 KNTC1P50748 2209 aa9.87□□□□□ -0.83
UFD1-210ENST00000494054 ZZEF1O43149 2961 aa9.87□□□□□ -0.83
UFD1-210ENST00000494054 LY6G6EA0A0G2JKS1 128 aa9.86□□□□□ -0.83
UFD1-210ENST00000494054 TSPAN11A1L157 253 aa9.86□□□□□ -0.83
UFD1-210ENST00000494054 EIF3CLB5ME19 914 aaKnown RBP9.86□□□□□ -0.83
UFD1-210ENST00000494054 SCAMP1O15126 338 aa9.86□□□□□ -0.83
UFD1-210ENST00000494054 DAPK3O43293 454 aa9.86□□□□□ -0.83
UFD1-210ENST00000494054 PRPSAP2O60256 369 aa9.86□□□□□ -0.83
UFD1-210ENST00000494054 TM7SF2O76062 418 aa9.86□□□□□ -0.83
UFD1-210ENST00000494054 CSF2P04141 144 aa9.86□□□□□ -0.83
UFD1-210ENST00000494054 PRKCGP05129 697 aa9.86□□□□□ -0.83
UFD1-210ENST00000494054 MYBL1P10243 752 aa9.86□□□□□ -0.83
UFD1-210ENST00000494054 CDK4P11802 303 aa9.86□□□□□ -0.83
UFD1-210ENST00000494054 NME1P15531 152 aaKnown RBP9.86□□□□□ -0.83
UFD1-210ENST00000494054 IGFALSP35858 605 aa9.86□□□□□ -0.83
UFD1-210ENST00000494054 HCAR3P49019 387 aa9.86□□□□□ -0.83
UFD1-210ENST00000494054 UBASH3AP57075 661 aa9.86□□□□□ -0.83
UFD1-210ENST00000494054 SEMG2Q02383 582 aa9.86□□□□□ -0.83
UFD1-210ENST00000494054 EIF2B5Q13144 721 aaKnown RBP9.86□□□□□ -0.83
UFD1-210ENST00000494054 TARDBPQ13148 414 aaKnown RBP eCLIP9.86□□□□□ -0.83
UFD1-210ENST00000494054 ILKQ13418 452 aa9.86□□□□□ -0.83
UFD1-210ENST00000494054 DPYSQ14117 519 aa9.86□□□□□ -0.83
UFD1-210ENST00000494054 TMEM52BQ4KMG9 183 aa9.86□□□□□ -0.83
UFD1-210ENST00000494054 TXNRD3NBQ6F5E7 133 aa9.86□□□□□ -0.83
UFD1-210ENST00000494054 C19orf48Q6RUI8 117 aa9.86□□□□□ -0.83
UFD1-210ENST00000494054 VPS36Q86VN1 386 aa9.86□□□□□ -0.83
UFD1-210ENST00000494054 PARGQ86W56 976 aa9.86□□□□□ -0.83
UFD1-210ENST00000494054 ZSWIM9Q86XI8 627 aa9.86□□□□□ -0.83
UFD1-210ENST00000494054 PSTKQ8IV42 348 aaKnown RBP9.86□□□□□ -0.83
UFD1-210ENST00000494054 PDCD7Q8N8D1 485 aaKnown RBP9.86□□□□□ -0.83
UFD1-210ENST00000494054 TP53I13Q8NBR0 393 aaPredicted RBP9.86□□□□□ -0.83
UFD1-210ENST00000494054 DENND6BQ8NEG7 585 aa9.86□□□□□ -0.83
UFD1-210ENST00000494054 CPLX3Q8WVH0 158 aa9.86□□□□□ -0.83
UFD1-210ENST00000494054 ARHGEF26Q96DR7 871 aa9.86□□□□□ -0.83
UFD1-210ENST00000494054 BTBD6Q96KE9 485 aa9.86□□□□□ -0.83
UFD1-210ENST00000494054 EIF3CQ99613 913 aaKnown RBP9.86□□□□□ -0.83
UFD1-210ENST00000494054 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.86□□□□□ -0.83
UFD1-210ENST00000494054 TCEAL2Q9H3H9 227 aaPredicted RBP9.86□□□□□ -0.83
UFD1-210ENST00000494054 ETNK2Q9NVF9 386 aa9.86□□□□□ -0.83
UFD1-210ENST00000494054 DKK4Q9UBT3 224 aa9.86□□□□□ -0.83
UFD1-210ENST00000494054 IPO11Q9UI26 975 aaKnown RBP9.86□□□□□ -0.83
UFD1-210ENST00000494054 PNMA8BQ9ULN7 279 aaPredicted RBP9.86□□□□□ -0.83
UFD1-210ENST00000494054 COQ6Q9Y2Z9 468 aa9.86□□□□□ -0.83
UFD1-210ENST00000494054 SCINQ9Y6U3 715 aa9.86□□□□□ -0.83
UFD1-210ENST00000494054 U3KQA8 63 aa9.86□□□□□ -0.83
UFD1-210ENST00000494054 FAM208BQ5VWN6 2430 aa9.86□□□□□ -0.83
UFD1-210ENST00000494054 ACACAQ13085 2346 aa9.85□□□□□ -0.83
UFD1-210ENST00000494054 A0A087X0T9 212 aa9.85□□□□□ -0.83
UFD1-210ENST00000494054 A0A1W2PQJ5 194 aa9.85□□□□□ -0.83
UFD1-210ENST00000494054 ARHGAP42A6NI28 874 aa9.85□□□□□ -0.83
UFD1-210ENST00000494054 K7ESM1 405 aa9.85□□□□□ -0.83
UFD1-210ENST00000494054 DFFAO00273 331 aa9.85□□□□□ -0.83
UFD1-210ENST00000494054 MUSKO15146 869 aa9.85□□□□□ -0.83
UFD1-210ENST00000494054 FAM228BP0C875 321 aa9.85□□□□□ -0.83
UFD1-210ENST00000494054 CKMT1AP12532 417 aa9.85□□□□□ -0.83
UFD1-210ENST00000494054 AMPD1P23109 780 aa9.85□□□□□ -0.83
UFD1-210ENST00000494054 PCK1P35558 622 aa9.85□□□□□ -0.83
UFD1-210ENST00000494054 CSNK1DP48730 415 aa9.85□□□□□ -0.83
UFD1-210ENST00000494054 HNRNPKP61978 463 aaKnown RBP eCLIP9.85□□□□□ -0.834e-6■■■□□ 18
UFD1-210ENST00000494054 ZBED6P86452 979 aa9.85□□□□□ -0.83
UFD1-210ENST00000494054 DAB2P98082 770 aa9.85□□□□□ -0.83
UFD1-210ENST00000494054 INSM1Q01101 510 aaPredicted RBP9.85□□□□□ -0.83
UFD1-210ENST00000494054 IL10RBQ08334 325 aa9.85□□□□□ -0.83
UFD1-210ENST00000494054 UGP2Q16851 508 aa9.85□□□□□ -0.83
UFD1-210ENST00000494054 SMTNL2Q2TAL5 461 aa9.85□□□□□ -0.83
UFD1-210ENST00000494054 WSCD2Q2TBF2 565 aa9.85□□□□□ -0.83
UFD1-210ENST00000494054 TDRD12Q587J7 1177 aaKnown RBP9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms