RNA–Protein interactions for RNA: ENST00000493886.5

VCP-207, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 2,942 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-207ENST00000493886 FNDC1Q4ZHG4 1894 aaPredicted RBP13.93□□□□□ -0.18
VCP-207ENST00000493886 BPTFQ12830 3046 aa13.92□□□□□ -0.18
VCP-207ENST00000493886 GREB1Q4ZG55 1949 aa13.92□□□□□ -0.18
VCP-207ENST00000493886 J3KR12 359 aa13.92□□□□□ -0.18
VCP-207ENST00000493886 LIN7AO14910 233 aaPredicted RBP13.92□□□□□ -0.18
VCP-207ENST00000493886 RENBPP51606 427 aa13.92□□□□□ -0.18
VCP-207ENST00000493886 CLCN2P51788 898 aa13.92□□□□□ -0.18
VCP-207ENST00000493886 EPHB1P54762 984 aa13.92□□□□□ -0.18
VCP-207ENST00000493886 MRPS35P82673 323 aaKnown RBP13.92□□□□□ -0.18
VCP-207ENST00000493886 CDK18Q07002 472 aa13.92□□□□□ -0.18
VCP-207ENST00000493886 ARHGEF6Q15052 776 aa13.92□□□□□ -0.18
VCP-207ENST00000493886 DLG2Q15700 870 aa13.92□□□□□ -0.18
VCP-207ENST00000493886 CCDC153Q494R4 210 aa13.92□□□□□ -0.18
VCP-207ENST00000493886 RANBP10Q6VN20 620 aa13.92□□□□□ -0.18
VCP-207ENST00000493886 ANKS3Q6ZW76 656 aa13.92□□□□□ -0.18
VCP-207ENST00000493886 KDELC2Q7Z4H8 507 aa13.92□□□□□ -0.18
VCP-207ENST00000493886 PPFIBP2Q8ND30 876 aa13.92□□□□□ -0.18
VCP-207ENST00000493886 TTPALQ9BTX7 342 aa13.92□□□□□ -0.18
VCP-207ENST00000493886 SLC25A51Q9H1U9 297 aa13.92□□□□□ -0.18
VCP-207ENST00000493886 ATXN3LQ9H3M9 355 aa13.92□□□□□ -0.18
VCP-207ENST00000493886 TCAF1Q9Y4C2 921 aa13.92□□□□□ -0.18
VCP-207ENST00000493886 IGLV3-27P01718 113 aa13.92□□□□□ -0.18
VCP-207ENST00000493886 C2P06681 752 aa13.92□□□□□ -0.18
VCP-207ENST00000493886 SP100P23497 879 aaPredicted RBP13.92□□□□□ -0.18
VCP-207ENST00000493886 ESRP1Q6NXG1 681 aaKnown RBP13.92□□□□□ -0.18
VCP-207ENST00000493886 PRSS55Q6UWB4 352 aaPredicted RBP13.92□□□□□ -0.18
VCP-207ENST00000493886 TMPRSS6Q8IU80 811 aa13.92□□□□□ -0.18
VCP-207ENST00000493886 MFN1Q8IWA4 741 aa13.92□□□□□ -0.18
VCP-207ENST00000493886 ACVR1CQ8NER5 493 aa13.92□□□□□ -0.18
VCP-207ENST00000493886 GIPC2Q8TF65 315 aa13.92□□□□□ -0.18
VCP-207ENST00000493886 BCL7CQ8WUZ0 217 aaPredicted RBP13.92□□□□□ -0.18
VCP-207ENST00000493886 PTCD2Q8WV60 388 aaKnown RBP13.92□□□□□ -0.18
VCP-207ENST00000493886 SCLYQ96I15 445 aa13.92□□□□□ -0.18
VCP-207ENST00000493886 ANKRD27Q96NW4 1050 aa13.92□□□□□ -0.18
VCP-207ENST00000493886 NT5MQ9NPB1 228 aa13.92□□□□□ -0.18
VCP-207ENST00000493886 COMMD8Q9NX08 183 aa13.92□□□□□ -0.18
VCP-207ENST00000493886 STX18Q9P2W9 335 aaKnown RBP13.92□□□□□ -0.18
VCP-207ENST00000493886 TAGLN3Q9UI15 199 aa13.92□□□□□ -0.18
VCP-207ENST00000493886 PPM1HQ9ULR3 514 aa13.92□□□□□ -0.18
VCP-207ENST00000493886 RPL26L1Q9UNX3 145 aaKnown RBP13.92□□□□□ -0.18
VCP-207ENST00000493886 MAP3K7O43318 606 aa13.91□□□□□ -0.18
VCP-207ENST00000493886 PQBP1O60828 265 aaKnown RBP13.91□□□□□ -0.18
VCP-207ENST00000493886 CIB2O75838 187 aa13.91□□□□□ -0.18
VCP-207ENST00000493886 ZMPSTE24O75844 475 aa13.91□□□□□ -0.18
VCP-207ENST00000493886 PDE5AO76074 875 aa13.91□□□□□ -0.18
VCP-207ENST00000493886 SERPINE1P05121 402 aa13.91□□□□□ -0.18
VCP-207ENST00000493886 FESP07332 822 aa13.91□□□□□ -0.18
VCP-207ENST00000493886 ZCCHC18P0CG32 403 aa13.91□□□□□ -0.18
VCP-207ENST00000493886 SLC1A6P48664 564 aa13.91□□□□□ -0.18
VCP-207ENST00000493886 PRMT2P55345 433 aa13.91□□□□□ -0.18
VCP-207ENST00000493886 WNT3AP56704 352 aa13.91□□□□□ -0.18
VCP-207ENST00000493886 GRM3Q14832 879 aa13.91□□□□□ -0.18
VCP-207ENST00000493886 RALGPS1Q5JS13 557 aa13.91□□□□□ -0.18
VCP-207ENST00000493886 KDELC1Q6UW63 502 aa13.91□□□□□ -0.18
VCP-207ENST00000493886 ATG14Q6ZNE5 492 aa13.91□□□□□ -0.18
VCP-207ENST00000493886 CLEC14AQ86T13 490 aa13.91□□□□□ -0.18
VCP-207ENST00000493886 ZC3HC1Q86WB0 502 aaKnown RBP13.91□□□□□ -0.18
VCP-207ENST00000493886 ARHGAP24Q8N264 748 aa13.91□□□□□ -0.18
VCP-207ENST00000493886 TTC30BQ8N4P2 665 aa13.91□□□□□ -0.18
VCP-207ENST00000493886 FATE1Q969F0 183 aa13.91□□□□□ -0.18
VCP-207ENST00000493886 FAM136AQ96C01 138 aa13.91□□□□□ -0.18
VCP-207ENST00000493886 KLHL5Q96PQ7 755 aa13.91□□□□□ -0.18
VCP-207ENST00000493886 GPR22Q99680 433 aa13.91□□□□□ -0.18
VCP-207ENST00000493886 UNC93B1Q9H1C4 597 aa13.91□□□□□ -0.18
VCP-207ENST00000493886 RHOJQ9H4E5 214 aa13.91□□□□□ -0.18
VCP-207ENST00000493886 CCSER2Q9H7U1 834 aa13.91□□□□□ -0.18
VCP-207ENST00000493886 SP110Q9HB58 689 aa13.91□□□□□ -0.18
VCP-207ENST00000493886 MRM3Q9HC36 420 aaKnown RBP13.91□□□□□ -0.18
VCP-207ENST00000493886 SLC39A10Q9ULF5 831 aa13.91□□□□□ -0.18
VCP-207ENST00000493886 LRCH1Q9Y2L9 728 aa13.91□□□□□ -0.18
VCP-207ENST00000493886 CDY1Q9Y6F8 540 aa13.91□□□□□ -0.18
VCP-207ENST00000493886 MYLKQ15746 1914 aa13.91□□□□□ -0.18
VCP-207ENST00000493886 AHCYL1O43865 530 aa13.91□□□□□ -0.18
VCP-207ENST00000493886 SMIM24O75264 130 aa13.91□□□□□ -0.18
VCP-207ENST00000493886 VAPBO95292 243 aa13.91□□□□□ -0.18
VCP-207ENST00000493886 ZDHHC11BP0C7U3 371 aa13.91□□□□□ -0.18
VCP-207ENST00000493886 CPA3P15088 417 aa13.91□□□□□ -0.18
VCP-207ENST00000493886 HADHAP40939 763 aa13.91□□□□□ -0.18
VCP-207ENST00000493886 CHRNA4P43681 627 aa13.91□□□□□ -0.18
VCP-207ENST00000493886 IRF9Q00978 393 aa13.91□□□□□ -0.18
VCP-207ENST00000493886 SLC10A7Q0GE19 358 aa13.91□□□□□ -0.18
VCP-207ENST00000493886 PCSK7Q16549 785 aa13.91□□□□□ -0.18
VCP-207ENST00000493886 MARC1Q5VT66 337 aa13.91□□□□□ -0.18
VCP-207ENST00000493886 IZUMO2Q6UXV1 221 aa13.91□□□□□ -0.18
VCP-207ENST00000493886 ZNF354CQ86Y25 554 aa13.91□□□□□ -0.18
VCP-207ENST00000493886 C2orf15Q8WU43 125 aaKnown RBP13.91□□□□□ -0.18
VCP-207ENST00000493886 PSMG2Q969U7 264 aa13.91□□□□□ -0.18
VCP-207ENST00000493886 PABPC5Q96DU9 382 aaKnown RBP13.91□□□□□ -0.18
VCP-207ENST00000493886 RPRD1AQ96P16 312 aaPredicted RBP13.91□□□□□ -0.18
VCP-207ENST00000493886 PNPOQ9NVS9 261 aa13.91□□□□□ -0.18
VCP-207ENST00000493886 SCN5AQ14524 2016 aa13.91□□□□□ -0.18
VCP-207ENST00000493886 DRGXA6NNA5 263 aa13.91□□□□□ -0.18
VCP-207ENST00000493886 EIF3FO00303 357 aaPredicted RBP13.91□□□□□ -0.18
VCP-207ENST00000493886 TLR5O60602 858 aa13.91□□□□□ -0.18
VCP-207ENST00000493886 PEX14O75381 377 aa13.91□□□□□ -0.18
VCP-207ENST00000493886 E2F6O75461 281 aa13.91□□□□□ -0.18
VCP-207ENST00000493886 MYCP01106 439 aaPredicted RBP13.91□□□□□ -0.18
VCP-207ENST00000493886 GRK2P25098 689 aa13.91□□□□□ -0.18
VCP-207ENST00000493886 ARCN1P48444 511 aaKnown RBP13.91□□□□□ -0.18
VCP-207ENST00000493886 MAXP61244 160 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms