RNA–Protein interactions for RNA: ENST00000492793.1

CLK1-213, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 596 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-213ENST00000492793 MVB12BQ9H7P6 319 aa4.16□□□□□ -1.74
CLK1-213ENST00000492793 PRKRIP1Q9H875 184 aaPredicted RBP4.16□□□□□ -1.74
CLK1-213ENST00000492793 BPIFA1Q9NP55 256 aa4.16□□□□□ -1.74
CLK1-213ENST00000492793 EIF2B3Q9NR50 452 aaKnown RBP4.16□□□□□ -1.74
CLK1-213ENST00000492793 BLOC1S4Q9NUP1 217 aa4.16□□□□□ -1.74
CLK1-213ENST00000492793 POT1Q9NUX5 634 aa4.16□□□□□ -1.74
CLK1-213ENST00000492793 MAP3K20Q9NYL2 800 aaKnown RBP4.16□□□□□ -1.74
CLK1-213ENST00000492793 ELOVL5Q9NYP7 299 aa4.16□□□□□ -1.74
CLK1-213ENST00000492793 LIMA1Q9UHB6 759 aaKnown RBP4.16□□□□□ -1.74
CLK1-213ENST00000492793 MKLN1Q9UL63 735 aa4.16□□□□□ -1.74
CLK1-213ENST00000492793 PCDHA12Q9UN75 941 aa4.16□□□□□ -1.74
CLK1-213ENST00000492793 A4GNTQ9UNA3 340 aa4.16□□□□□ -1.74
CLK1-213ENST00000492793 DDX52Q9Y2R4 599 aaKnown RBP eCLIP4.16□□□□□ -1.74
CLK1-213ENST00000492793 IGLV5-39A0A0G2JS06 123 aa4.15□□□□□ -1.75
CLK1-213ENST00000492793 PI4KAP2A4QPH2 592 aa4.15□□□□□ -1.75
CLK1-213ENST00000492793 NPIPB15A6NHN6 443 aaPredicted RBP4.15□□□□□ -1.75
CLK1-213ENST00000492793 H3BNX3 289 aa4.15□□□□□ -1.75
CLK1-213ENST00000492793 MDM4O15151 490 aa4.15□□□□□ -1.75
CLK1-213ENST00000492793 USO1O60763 962 aaKnown RBP4.15□□□□□ -1.75
CLK1-213ENST00000492793 SEC14L2O76054 403 aa4.15□□□□□ -1.75
CLK1-213ENST00000492793 RGS11O94810 467 aa4.15□□□□□ -1.75
CLK1-213ENST00000492793 CCNDBP1O95273 360 aa4.15□□□□□ -1.75
CLK1-213ENST00000492793 CLDN7O95471 211 aa4.15□□□□□ -1.75
CLK1-213ENST00000492793 CYP1A2P05177 515 aa4.15□□□□□ -1.75
CLK1-213ENST00000492793 CLEC3BP05452 202 aa4.15□□□□□ -1.75
CLK1-213ENST00000492793 TMEM191BP0C7N4 346 aa4.15□□□□□ -1.75
CLK1-213ENST00000492793 EFNA5P52803 228 aa4.15□□□□□ -1.75
CLK1-213ENST00000492793 CLDN2P57739 230 aa4.15□□□□□ -1.75
CLK1-213ENST00000492793 DCAF7P61962 342 aa4.15□□□□□ -1.75
CLK1-213ENST00000492793 RPL7AP62424 266 aaKnown RBP4.15□□□□□ -1.75
CLK1-213ENST00000492793 PKP1Q13835 747 aa4.15□□□□□ -1.75
CLK1-213ENST00000492793 ERV3-1Q14264 604 aa4.15□□□□□ -1.75
CLK1-213ENST00000492793 GPR18Q14330 331 aa4.15□□□□□ -1.75
CLK1-213ENST00000492793 RNPS1Q15287 305 aaKnown RBP4.15□□□□□ -1.75
CLK1-213ENST00000492793 CCDC142Q17RM4 750 aa4.15□□□□□ -1.75
CLK1-213ENST00000492793 SLC45A4Q5BKX6 768 aa4.15□□□□□ -1.75
CLK1-213ENST00000492793 PARM1Q6UWI2 310 aa4.15□□□□□ -1.75
CLK1-213ENST00000492793 Q6ZTK2 550 aa4.15□□□□□ -1.75
CLK1-213ENST00000492793 CTU1Q7Z7A3 348 aaKnown RBP4.15□□□□□ -1.75
CLK1-213ENST00000492793 PIM3Q86V86 326 aa4.15□□□□□ -1.75
CLK1-213ENST00000492793 ADAMTS15Q8TE58 950 aa4.15□□□□□ -1.75
CLK1-213ENST00000492793 TMEM170AQ8WVE7 144 aa4.15□□□□□ -1.75
CLK1-213ENST00000492793 GTF3C6Q969F1 213 aa4.15□□□□□ -1.75
CLK1-213ENST00000492793 OTULINQ96BN8 352 aa4.15□□□□□ -1.75
CLK1-213ENST00000492793 WDR77Q9BQA1 342 aaPredicted RBP4.15□□□□□ -1.75
CLK1-213ENST00000492793 NPFFR1Q9GZQ6 430 aa4.15□□□□□ -1.75
CLK1-213ENST00000492793 NCKIPSDQ9NZQ3 722 aa4.15□□□□□ -1.75
CLK1-213ENST00000492793 PSAT1Q9Y617 370 aa4.15□□□□□ -1.75
CLK1-213ENST00000492793 SQORQ9Y6N5 450 aa4.15□□□□□ -1.75
CLK1-213ENST00000492793 PIAS3Q9Y6X2 628 aa4.15□□□□□ -1.75
CLK1-213ENST00000492793 FAM237BA0A1B0GVD1 139 aa4.14□□□□□ -1.75
CLK1-213ENST00000492793 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.14□□□□□ -1.75
CLK1-213ENST00000492793 FSD2A1L4K1 749 aa4.14□□□□□ -1.75
CLK1-213ENST00000492793 DNAJC9-AS1A6NH13 148 aa4.14□□□□□ -1.75
CLK1-213ENST00000492793 CBY3A6NI87 242 aa4.14□□□□□ -1.75
CLK1-213ENST00000492793 HSPB2A8KAH6 182 aa4.14□□□□□ -1.75
CLK1-213ENST00000492793 KDM4EB2RXH2 506 aaPredicted RBP4.14□□□□□ -1.75
CLK1-213ENST00000492793 KLRF2D3W0D1 207 aa4.14□□□□□ -1.75
CLK1-213ENST00000492793 SOCS2O14508 198 aa4.14□□□□□ -1.75
CLK1-213ENST00000492793 PPEF2O14830 753 aa4.14□□□□□ -1.75
CLK1-213ENST00000492793 ATG13O75143 517 aa4.14□□□□□ -1.75
CLK1-213ENST00000492793 KLKB1P03952 638 aa4.14□□□□□ -1.75
CLK1-213ENST00000492793 HEXAP06865 529 aa4.14□□□□□ -1.75
CLK1-213ENST00000492793 MYZAPP0CAP1 466 aa4.14□□□□□ -1.75
CLK1-213ENST00000492793 ICAM3P32942 547 aa4.14□□□□□ -1.75
CLK1-213ENST00000492793 PPARGP37231 505 aaPredicted RBP4.14□□□□□ -1.75
CLK1-213ENST00000492793 CENPAP49450 140 aa4.14□□□□□ -1.75
CLK1-213ENST00000492793 MAMLD1Q13495 774 aa4.14□□□□□ -1.75
CLK1-213ENST00000492793 MED22Q15528 200 aa4.14□□□□□ -1.75
CLK1-213ENST00000492793 HSPB2Q16082 182 aa4.14□□□□□ -1.75
CLK1-213ENST00000492793 PLEKHO1Q53GL0 409 aaPredicted RBP4.14□□□□□ -1.75
CLK1-213ENST00000492793 Q5PR19 223 aa4.14□□□□□ -1.75
CLK1-213ENST00000492793 TSSK4Q6SA08 328 aa4.14□□□□□ -1.75
CLK1-213ENST00000492793 PXKQ7Z7A4 578 aa4.14□□□□□ -1.75
CLK1-213ENST00000492793 DENND6AQ8IWF6 608 aa4.14□□□□□ -1.75
CLK1-213ENST00000492793 DHX40Q8IX18 779 aaKnown RBP4.14□□□□□ -1.75
CLK1-213ENST00000492793 NGEFQ8N5V2 710 aa4.14□□□□□ -1.75
CLK1-213ENST00000492793 PARP16Q8N5Y8 322 aa4.14□□□□□ -1.75
CLK1-213ENST00000492793 FRMD1Q8N878 549 aa4.14□□□□□ -1.75
CLK1-213ENST00000492793 NRACQ8N912 160 aa4.14□□□□□ -1.75
CLK1-213ENST00000492793 MIGA1Q8NAN2 632 aa4.14□□□□□ -1.75
CLK1-213ENST00000492793 GABPB2Q8TAK5 448 aaPredicted RBP4.14□□□□□ -1.75
CLK1-213ENST00000492793 TMEM18Q96B42 140 aa4.14□□□□□ -1.75
CLK1-213ENST00000492793 INTS12Q96CB8 462 aaKnown RBP4.14□□□□□ -1.75
CLK1-213ENST00000492793 MSI2Q96DH6 328 aaKnown RBP4.14□□□□□ -1.75
CLK1-213ENST00000492793 PABPC5Q96DU9 382 aaKnown RBP4.14□□□□□ -1.75
CLK1-213ENST00000492793 MXRA8Q9BRK3 442 aa4.14□□□□□ -1.75
CLK1-213ENST00000492793 KIF9Q9HAQ2 790 aa4.14□□□□□ -1.75
CLK1-213ENST00000492793 BRF2Q9HAW0 419 aa4.14□□□□□ -1.75
CLK1-213ENST00000492793 ZNF70Q9UC06 446 aaPredicted RBP4.14□□□□□ -1.75
CLK1-213ENST00000492793 NDRG3Q9UGV2 375 aa4.14□□□□□ -1.75
CLK1-213ENST00000492793 FBXO2Q9UK22 296 aaPredicted RBP4.14□□□□□ -1.75
CLK1-213ENST00000492793 CORO1CQ9ULV4 474 aaPredicted RBP4.14□□□□□ -1.75
CLK1-213ENST00000492793 AAR2Q9Y312 384 aaKnown RBP4.14□□□□□ -1.75
CLK1-213ENST00000492793 KCNE2Q9Y6J6 123 aa4.14□□□□□ -1.75
CLK1-213ENST00000492793 SCINQ9Y6U3 715 aa4.14□□□□□ -1.75
CLK1-213ENST00000492793 KDM3AQ9Y4C1 1321 aa4.14□□□□□ -1.75
CLK1-213ENST00000492793 TDRD9Q8NDG6 1382 aaKnown RBP4.14□□□□□ -1.75
CLK1-213ENST00000492793 GAGE12JA6NER3 117 aa4.13□□□□□ -1.75
CLK1-213ENST00000492793 USP17L23D6RBM5 183 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms