RNA–Protein interactions for RNA: ENST00000491292.5

ERCC3-208, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC3, Length 4,018 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-208ENST00000491292 PSMB9P28065 219 aa9.91□□□□□ -0.82
ERCC3-208ENST00000491292 TPTEP56180 551 aa9.91□□□□□ -0.82
ERCC3-208ENST00000491292 GJA9P57773 515 aa9.91□□□□□ -0.82
ERCC3-208ENST00000491292 MRPS15P82914 257 aaKnown RBP9.91□□□□□ -0.82
ERCC3-208ENST00000491292 RAB39AQ14964 217 aa9.91□□□□□ -0.82
ERCC3-208ENST00000491292 ZNF534Q76KX8 674 aa9.91□□□□□ -0.82
ERCC3-208ENST00000491292 BBS5Q8N3I7 341 aa9.91□□□□□ -0.82
ERCC3-208ENST00000491292 PSMA8Q8TAA3 256 aa9.91□□□□□ -0.82
ERCC3-208ENST00000491292 C1orf50Q9BV19 199 aa9.91□□□□□ -0.82
ERCC3-208ENST00000491292 HIPK3Q9H422 1215 aa9.91□□□□□ -0.82
ERCC3-208ENST00000491292 MINDY3Q9H8M7 445 aa9.91□□□□□ -0.82
ERCC3-208ENST00000491292 IGSF9Q9P2J2 1179 aa9.91□□□□□ -0.82
ERCC3-208ENST00000491292 SEPT3Q9UH03 358 aa9.91□□□□□ -0.82
ERCC3-208ENST00000491292 TIMM13Q9Y5L4 95 aaPredicted RBP9.91□□□□□ -0.82
ERCC3-208ENST00000491292 SCN7AQ01118 1682 aa9.91□□□□□ -0.82
ERCC3-208ENST00000491292 TCRBV5S1A1TA0A578 114 aa9.91□□□□□ -0.82
ERCC3-208ENST00000491292 RBM47A0AV96 593 aaKnown RBP9.91□□□□□ -0.82
ERCC3-208ENST00000491292 H3BMM5 538 aa9.91□□□□□ -0.82
ERCC3-208ENST00000491292 RGS20O76081 388 aa9.91□□□□□ -0.82
ERCC3-208ENST00000491292 COL6A2P12110 1019 aa9.91□□□□□ -0.82
ERCC3-208ENST00000491292 PORP16435 677 aaPredicted RBP9.91□□□□□ -0.82
ERCC3-208ENST00000491292 PAMP19021 973 aa9.91□□□□□ -0.82
ERCC3-208ENST00000491292 ELK4P28324 431 aa9.91□□□□□ -0.82
ERCC3-208ENST00000491292 KCNK10P57789 538 aa9.91□□□□□ -0.82
ERCC3-208ENST00000491292 TAS2R39P59534 338 aa9.91□□□□□ -0.82
ERCC3-208ENST00000491292 TNFAIP2Q03169 654 aa9.91□□□□□ -0.82
ERCC3-208ENST00000491292 HSDL1Q3SXM5 330 aa9.91□□□□□ -0.82
ERCC3-208ENST00000491292 NCBP2-AS2Q69YL0 99 aa9.91□□□□□ -0.82
ERCC3-208ENST00000491292 NAPEPLDQ6IQ20 393 aa9.91□□□□□ -0.82
ERCC3-208ENST00000491292 TIFABQ6ZNK6 161 aa9.91□□□□□ -0.82
ERCC3-208ENST00000491292 CTU1Q7Z7A3 348 aaKnown RBP9.91□□□□□ -0.82
ERCC3-208ENST00000491292 TTC30AQ86WT1 665 aa9.91□□□□□ -0.82
ERCC3-208ENST00000491292 ERO1BQ86YB8 467 aa9.91□□□□□ -0.82
ERCC3-208ENST00000491292 MICU2Q8IYU8 434 aa9.91□□□□□ -0.82
ERCC3-208ENST00000491292 SLC15A4Q8N697 577 aa9.91□□□□□ -0.82
ERCC3-208ENST00000491292 CNTD1Q8N815 330 aa9.91□□□□□ -0.82
ERCC3-208ENST00000491292 FBXO30Q8TB52 745 aa9.91□□□□□ -0.82
ERCC3-208ENST00000491292 VPS33AQ96AX1 596 aa9.91□□□□□ -0.82
ERCC3-208ENST00000491292 PABPC5Q96DU9 382 aaKnown RBP9.91□□□□□ -0.82
ERCC3-208ENST00000491292 FAM167AQ96KS9 214 aa9.91□□□□□ -0.82
ERCC3-208ENST00000491292 HERC2P3Q9BVR0 1158 aa9.91□□□□□ -0.82
ERCC3-208ENST00000491292 TMEM134Q9H6X4 195 aa9.91□□□□□ -0.82
ERCC3-208ENST00000491292 SNTG2Q9NY99 539 aa9.91□□□□□ -0.82
ERCC3-208ENST00000491292 NUDT5Q9UKK9 219 aa9.91□□□□□ -0.82
ERCC3-208ENST00000491292 U3KQV3 271 aa9.91□□□□□ -0.82
ERCC3-208ENST00000491292 STRCQ7RTU9 1775 aa9.9□□□□□ -0.82
ERCC3-208ENST00000491292 A0A0J9YYE9 177 aa9.9□□□□□ -0.82
ERCC3-208ENST00000491292 ATICP31939 592 aa9.9□□□□□ -0.82
ERCC3-208ENST00000491292 MAP3K7CLP57077 242 aa9.9□□□□□ -0.82
ERCC3-208ENST00000491292 TMEM132BQ14DG7 1078 aa9.9□□□□□ -0.82
ERCC3-208ENST00000491292 ARL13BQ3SXY8 428 aa9.9□□□□□ -0.82
ERCC3-208ENST00000491292 ESRP1Q6NXG1 681 aaKnown RBP9.9□□□□□ -0.82
ERCC3-208ENST00000491292 ZYG11AQ6WRX3 759 aa9.9□□□□□ -0.82
ERCC3-208ENST00000491292 CCDC103Q8IW40 242 aa9.9□□□□□ -0.82
ERCC3-208ENST00000491292 ZNF280CQ8ND82 737 aa9.9□□□□□ -0.82
ERCC3-208ENST00000491292 HDAC10Q969S8 669 aa9.9□□□□□ -0.82
ERCC3-208ENST00000491292 TBCDQ9BTW9 1192 aa9.9□□□□□ -0.82
ERCC3-208ENST00000491292 EPB41L1Q9H4G0 881 aa9.9□□□□□ -0.82
ERCC3-208ENST00000491292 PTGDR2Q9Y5Y4 395 aa9.9□□□□□ -0.82
ERCC3-208ENST00000491292 DOT1LQ8TEK3 1739 aa9.9□□□□□ -0.82
ERCC3-208ENST00000491292 SUPT3HB4E1H0 165 aa9.9□□□□□ -0.82
ERCC3-208ENST00000491292 IQCJ-SCHIP1C9J366 451 aaPredicted RBP9.9□□□□□ -0.82
ERCC3-208ENST00000491292 G3V2L1 256 aa9.9□□□□□ -0.82
ERCC3-208ENST00000491292 PPEF2O14830 753 aa9.9□□□□□ -0.82
ERCC3-208ENST00000491292 FAM189A1O60320 539 aa9.9□□□□□ -0.82
ERCC3-208ENST00000491292 SNX2O60749 519 aa9.9□□□□□ -0.82
ERCC3-208ENST00000491292 CNOT3O75175 753 aaKnown RBP9.9□□□□□ -0.82
ERCC3-208ENST00000491292 DEAF1O75398 565 aaPredicted RBP9.9□□□□□ -0.82
ERCC3-208ENST00000491292 CD247P20963 164 aa9.9□□□□□ -0.82
ERCC3-208ENST00000491292 SLC7A1P30825 629 aa9.9□□□□□ -0.82
ERCC3-208ENST00000491292 NKX2-5P52952 324 aaPredicted RBP9.9□□□□□ -0.82
ERCC3-208ENST00000491292 PDCD4Q53EL6 469 aaKnown RBP9.9□□□□□ -0.82
ERCC3-208ENST00000491292 PLD3Q8IV08 490 aa9.9□□□□□ -0.82
ERCC3-208ENST00000491292 FBXO16Q8IX29 292 aaPredicted RBP9.9□□□□□ -0.82
ERCC3-208ENST00000491292 RAVER1Q8IY67 606 aaKnown RBP9.9□□□□□ -0.82
ERCC3-208ENST00000491292 HEXDCQ8WVB3 486 aa9.9□□□□□ -0.82
ERCC3-208ENST00000491292 FIG4Q92562 907 aa9.9□□□□□ -0.82
ERCC3-208ENST00000491292 HBEGFQ99075 208 aa9.9□□□□□ -0.82
ERCC3-208ENST00000491292 HEPHQ9BQS7 1158 aa9.9□□□□□ -0.82
ERCC3-208ENST00000491292 CYP3A43Q9HB55 503 aa9.9□□□□□ -0.82
ERCC3-208ENST00000491292 ORC6Q9Y5N6 252 aa9.9□□□□□ -0.82
ERCC3-208ENST00000491292 ARFGEF1Q9Y6D6 1849 aa9.9□□□□□ -0.83
ERCC3-208ENST00000491292 MYO1GB0I1T2 1018 aa9.9□□□□□ -0.83
ERCC3-208ENST00000491292 WNT10BO00744 389 aa9.9□□□□□ -0.83
ERCC3-208ENST00000491292 GRID2O43424 1007 aa9.9□□□□□ -0.83
ERCC3-208ENST00000491292 TBC1D4O60343 1298 aa9.9□□□□□ -0.83
ERCC3-208ENST00000491292 RSL1D1O76021 490 aaKnown RBP9.9□□□□□ -0.83
ERCC3-208ENST00000491292 SNAP29O95721 258 aa9.9□□□□□ -0.83
ERCC3-208ENST00000491292 CD151P48509 253 aa9.9□□□□□ -0.83
ERCC3-208ENST00000491292 NDUFV1P49821 464 aa9.9□□□□□ -0.83
ERCC3-208ENST00000491292 BMXP51813 675 aa9.9□□□□□ -0.83
ERCC3-208ENST00000491292 RAB10P61026 200 aa9.9□□□□□ -0.83
ERCC3-208ENST00000491292 CD300CQ08708 224 aa9.9□□□□□ -0.83
ERCC3-208ENST00000491292 FRG1Q14331 258 aaKnown RBP9.9□□□□□ -0.83
ERCC3-208ENST00000491292 PFKFB4Q16877 469 aa9.9□□□□□ -0.83
ERCC3-208ENST00000491292 CCDC142Q17RM4 750 aa9.9□□□□□ -0.83
ERCC3-208ENST00000491292 AGAP9Q5VTM2 703 aa9.9□□□□□ -0.83
ERCC3-208ENST00000491292 CNSTQ6PJW8 725 aa9.9□□□□□ -0.83
ERCC3-208ENST00000491292 CRTC3Q6UUV7 619 aa9.9□□□□□ -0.83
ERCC3-208ENST00000491292 PIWIL3Q7Z3Z3 882 aaKnown RBP9.9□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms