RNA–Protein interactions for RNA: ENST00000491183.5

HMGN1-219, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 527 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-219ENST00000491183 SCINQ9Y6U3 715 aa18.22■□□□□ 0.51
HMGN1-219ENST00000491183 CFAP47Q6ZTR5 3102 aa18.21■□□□□ 0.51
HMGN1-219ENST00000491183 DMXL2Q8TDJ6 3036 aa18.21■□□□□ 0.51
HMGN1-219ENST00000491183 ZFHX4Q86UP3 3567 aa18.21■□□□□ 0.51
HMGN1-219ENST00000491183 SPTY2D1-AS1A0A0U1RR47 76 aa18.21■□□□□ 0.51
HMGN1-219ENST00000491183 FPGTO14772 594 aa18.21■□□□□ 0.51
HMGN1-219ENST00000491183 ZZEF1O43149 2961 aa18.21■□□□□ 0.51
HMGN1-219ENST00000491183 DAPK3O43293 454 aa18.21■□□□□ 0.51
HMGN1-219ENST00000491183 BUB1BO60566 1050 aaPredicted RBP18.21■□□□□ 0.51
HMGN1-219ENST00000491183 MMP20O60882 483 aa18.21■□□□□ 0.51
HMGN1-219ENST00000491183 MYBL1P10243 752 aa18.21■□□□□ 0.51
HMGN1-219ENST00000491183 TCF4P15884 667 aa18.21■□□□□ 0.51
HMGN1-219ENST00000491183 IL1R2P27930 398 aa18.21■□□□□ 0.51
HMGN1-219ENST00000491183 RGRP47804 291 aa18.21■□□□□ 0.51
HMGN1-219ENST00000491183 HCAR3P49019 387 aa18.21■□□□□ 0.51
HMGN1-219ENST00000491183 PFN3P60673 137 aa18.21■□□□□ 0.51
HMGN1-219ENST00000491183 TPM4P67936 248 aa18.21■□□□□ 0.51
HMGN1-219ENST00000491183 TDRD12Q587J7 1177 aaKnown RBP18.21■□□□□ 0.51
HMGN1-219ENST00000491183 PPP6R3Q5H9R7 873 aaPredicted RBP18.21■□□□□ 0.51
HMGN1-219ENST00000491183 PSTKQ8IV42 348 aaKnown RBP18.21■□□□□ 0.51
HMGN1-219ENST00000491183 TP53INP2Q8IXH6 220 aa18.21■□□□□ 0.51
HMGN1-219ENST00000491183 NPWQ8N729 165 aa18.21■□□□□ 0.51
HMGN1-219ENST00000491183 OR4C6Q8NH72 309 aa18.21■□□□□ 0.51
HMGN1-219ENST00000491183 CPLX3Q8WVH0 158 aa18.21■□□□□ 0.51
HMGN1-219ENST00000491183 SYN2Q92777 582 aaPredicted RBP18.21■□□□□ 0.51
HMGN1-219ENST00000491183 ARHGEF26Q96DR7 871 aa18.21■□□□□ 0.51
HMGN1-219ENST00000491183 TRIM11Q96F44 468 aa18.21■□□□□ 0.51
HMGN1-219ENST00000491183 MRPL47Q9HD33 250 aaKnown RBP18.21■□□□□ 0.51
HMGN1-219ENST00000491183 RALYQ9UKM9 306 aaKnown RBP18.21■□□□□ 0.51
HMGN1-219ENST00000491183 CAPN11Q9UMQ6 739 aa18.21■□□□□ 0.51
HMGN1-219ENST00000491183 KNTC1P50748 2209 aa18.21■□□□□ 0.5
HMGN1-219ENST00000491183 LRRK1Q38SD2 2015 aa18.2■□□□□ 0.5
HMGN1-219ENST00000491183 MYLKQ15746 1914 aa18.2■□□□□ 0.5
HMGN1-219ENST00000491183 ARHGAP42A6NI28 874 aa18.2■□□□□ 0.5
HMGN1-219ENST00000491183 CDK4P11802 303 aa18.2■□□□□ 0.5
HMGN1-219ENST00000491183 ACP1P24666 158 aa18.2■□□□□ 0.5
HMGN1-219ENST00000491183 PCK1P35558 622 aa18.2■□□□□ 0.5
HMGN1-219ENST00000491183 RABIFP47224 123 aa18.2■□□□□ 0.5
HMGN1-219ENST00000491183 ACAP1Q15027 740 aa18.2■□□□□ 0.5
HMGN1-219ENST00000491183 ARHGAP36Q6ZRI8 547 aa18.2■□□□□ 0.5
HMGN1-219ENST00000491183 TSEN2Q8NCE0 465 aaKnown RBP18.2■□□□□ 0.5
HMGN1-219ENST00000491183 DENND6BQ8NEG7 585 aa18.2■□□□□ 0.5
HMGN1-219ENST00000491183 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.2■□□□□ 0.5
HMGN1-219ENST00000491183 SUV39H2Q9H5I1 410 aa18.2■□□□□ 0.5
HMGN1-219ENST00000491183 DNAJC28Q9NX36 388 aa18.2■□□□□ 0.5
HMGN1-219ENST00000491183 KLF15Q9UIH9 416 aa18.2■□□□□ 0.5
HMGN1-219ENST00000491183 BZW2Q9Y6E2 419 aaKnown RBP18.2■□□□□ 0.5
HMGN1-219ENST00000491183 A0A087X0T9 212 aa18.19■□□□□ 0.5
HMGN1-219ENST00000491183 TSPAN11A1L157 253 aa18.19■□□□□ 0.5
HMGN1-219ENST00000491183 FFAR2O15552 330 aa18.19■□□□□ 0.5
HMGN1-219ENST00000491183 TM7SF2O76062 418 aa18.19■□□□□ 0.5
HMGN1-219ENST00000491183 CSF2P04141 144 aa18.19■□□□□ 0.5
HMGN1-219ENST00000491183 SERPING1P05155 500 aa18.19■□□□□ 0.5
HMGN1-219ENST00000491183 FAM228BP0C875 321 aa18.19■□□□□ 0.5
HMGN1-219ENST00000491183 JUPP14923 745 aa18.19■□□□□ 0.5
HMGN1-219ENST00000491183 IGFALSP35858 605 aa18.19■□□□□ 0.5
HMGN1-219ENST00000491183 ZBED6P86452 979 aa18.19■□□□□ 0.5
HMGN1-219ENST00000491183 CYP4F3Q08477 520 aa18.19■□□□□ 0.5
HMGN1-219ENST00000491183 ILKQ13418 452 aa18.19■□□□□ 0.5
HMGN1-219ENST00000491183 DPYSQ14117 519 aa18.19■□□□□ 0.5
HMGN1-219ENST00000491183 PDE1CQ14123 709 aaPredicted RBP18.19■□□□□ 0.5
HMGN1-219ENST00000491183 TMEM52BQ4KMG9 183 aa18.19■□□□□ 0.5
HMGN1-219ENST00000491183 TXNRD3NBQ6F5E7 133 aa18.19■□□□□ 0.5
HMGN1-219ENST00000491183 VPS36Q86VN1 386 aa18.19■□□□□ 0.5
HMGN1-219ENST00000491183 ZSWIM9Q86XI8 627 aa18.19■□□□□ 0.5
HMGN1-219ENST00000491183 HCAR2Q8TDS4 363 aa18.19■□□□□ 0.5
HMGN1-219ENST00000491183 NCAPGQ9BPX3 1015 aa18.19■□□□□ 0.5
HMGN1-219ENST00000491183 WRAP53Q9BUR4 548 aaKnown RBP18.19■□□□□ 0.5
HMGN1-219ENST00000491183 THAP2Q9H0W7 228 aa18.19■□□□□ 0.5
HMGN1-219ENST00000491183 MBNL1Q9NR56 388 aaKnown RBP18.19■□□□□ 0.5
HMGN1-219ENST00000491183 IFNKQ9P0W0 207 aa18.19■□□□□ 0.5
HMGN1-219ENST00000491183 FREM2Q5SZK8 3169 aa18.19■□□□□ 0.5
HMGN1-219ENST00000491183 ANKRD36A6QL64 1941 aa18.18■□□□□ 0.5
HMGN1-219ENST00000491183 GOLGA6L19H0YKK7 550 aa18.18■□□□□ 0.5
HMGN1-219ENST00000491183 DFFAO00273 331 aa18.18■□□□□ 0.5
HMGN1-219ENST00000491183 PALMO75781 387 aa18.18■□□□□ 0.5
HMGN1-219ENST00000491183 NEBLO76041 1014 aa18.18■□□□□ 0.5
HMGN1-219ENST00000491183 GYPCP04921 128 aa18.18■□□□□ 0.5
HMGN1-219ENST00000491183 MYF5P13349 255 aa18.18■□□□□ 0.5
HMGN1-219ENST00000491183 NME1P15531 152 aaKnown RBP18.18■□□□□ 0.5
HMGN1-219ENST00000491183 AMPD1P23109 780 aa18.18■□□□□ 0.5
HMGN1-219ENST00000491183 CSNK1DP48730 415 aa18.18■□□□□ 0.5
HMGN1-219ENST00000491183 ZNF135P52742 658 aaPredicted RBP18.18■□□□□ 0.5
HMGN1-219ENST00000491183 HNRNPKP61978 463 aaKnown RBP eCLIP18.18■□□□□ 0.5
HMGN1-219ENST00000491183 EIF2B5Q13144 721 aaKnown RBP18.18■□□□□ 0.5
HMGN1-219ENST00000491183 TARDBPQ13148 414 aaKnown RBP eCLIP18.18■□□□□ 0.56e-12■□□□□ 10.5
HMGN1-219ENST00000491183 DPYSL2Q16555 572 aa18.18■□□□□ 0.5
HMGN1-219ENST00000491183 UGP2Q16851 508 aa18.18■□□□□ 0.5
HMGN1-219ENST00000491183 SMTNL2Q2TAL5 461 aa18.18■□□□□ 0.5
HMGN1-219ENST00000491183 SRLQ86TD4 932 aa18.18■□□□□ 0.5
HMGN1-219ENST00000491183 CAMK1DQ8IU85 385 aa18.18■□□□□ 0.5
HMGN1-219ENST00000491183 PDCD7Q8N8D1 485 aaKnown RBP18.18■□□□□ 0.5
HMGN1-219ENST00000491183 TP53I13Q8NBR0 393 aaPredicted RBP18.18■□□□□ 0.5
HMGN1-219ENST00000491183 CXorf40AQ8TE69 158 aa18.18■□□□□ 0.5
HMGN1-219ENST00000491183 BTBD6Q96KE9 485 aa18.18■□□□□ 0.5
HMGN1-219ENST00000491183 NSMCE3Q96MG7 304 aa18.18■□□□□ 0.5
HMGN1-219ENST00000491183 ZNF641Q96N77 438 aaPredicted RBP18.18■□□□□ 0.5
HMGN1-219ENST00000491183 ETNK2Q9NVF9 386 aa18.18■□□□□ 0.5
HMGN1-219ENST00000491183 DKK4Q9UBT3 224 aa18.18■□□□□ 0.5
HMGN1-219ENST00000491183 IPO11Q9UI26 975 aaKnown RBP18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms