RNA–Protein interactions for RNA: ENST00000490283.1

SEC13-218, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-218ENST00000490283 ATP13A3Q9H7F0 1226 aa17.66■□□□□ 0.42
SEC13-218ENST00000490283 KLHL11Q9NVR0 708 aa17.66■□□□□ 0.42
SEC13-218ENST00000490283 CTTNBP2NLQ9P2B4 639 aa17.66■□□□□ 0.42
SEC13-218ENST00000490283 LCMT1Q9UIC8 334 aa17.66■□□□□ 0.42
SEC13-218ENST00000490283 ITM2BQ9Y287 266 aa17.66■□□□□ 0.42
SEC13-218ENST00000490283 H2AFZP0C0S5 128 aa17.65■□□□□ 0.42
SEC13-218ENST00000490283 RARAP10276 462 aa17.65■□□□□ 0.42
SEC13-218ENST00000490283 IL1R2P27930 398 aa17.65■□□□□ 0.42
SEC13-218ENST00000490283 SERPINA4P29622 427 aa17.65■□□□□ 0.42
SEC13-218ENST00000490283 RENBPP51606 427 aa17.65■□□□□ 0.42
SEC13-218ENST00000490283 BNIP3Q12983 259 aa17.65■□□□□ 0.42
SEC13-218ENST00000490283 AFMIDQ63HM1 303 aa17.65■□□□□ 0.42
SEC13-218ENST00000490283 ERAP2Q6P179 960 aa17.65■□□□□ 0.42
SEC13-218ENST00000490283 BRAT1Q6PJG6 821 aa17.65■□□□□ 0.42
SEC13-218ENST00000490283 Q6ZSR6 202 aa17.65■□□□□ 0.42
SEC13-218ENST00000490283 H2AFVQ71UI9 128 aa17.65■□□□□ 0.42
SEC13-218ENST00000490283 ARHGAP12Q8IWW6 846 aa17.65■□□□□ 0.42
SEC13-218ENST00000490283 BBS5Q8N3I7 341 aa17.65■□□□□ 0.42
SEC13-218ENST00000490283 GALNT15Q8N3T1 639 aa17.65■□□□□ 0.42
SEC13-218ENST00000490283 NPWQ8N729 165 aa17.65■□□□□ 0.42
SEC13-218ENST00000490283 RNF214Q8ND24 703 aa17.65■□□□□ 0.42
SEC13-218ENST00000490283 NSMCE1Q8WV22 266 aa17.65■□□□□ 0.42
SEC13-218ENST00000490283 IFT43Q96FT9 208 aa17.65■□□□□ 0.42
SEC13-218ENST00000490283 BTBD6Q96KE9 485 aa17.65■□□□□ 0.42
SEC13-218ENST00000490283 ZNF641Q96N77 438 aaPredicted RBP17.65■□□□□ 0.42
SEC13-218ENST00000490283 LENG8Q96PV6 779 aaPredicted RBP17.65■□□□□ 0.42
SEC13-218ENST00000490283 C1QTNF2Q9BXJ5 285 aa17.65■□□□□ 0.42
SEC13-218ENST00000490283 SUV39H2Q9H5I1 410 aa17.65■□□□□ 0.42
SEC13-218ENST00000490283 UVRAGQ9P2Y5 699 aa17.65■□□□□ 0.42
SEC13-218ENST00000490283 CHD5Q8TDI0 1954 aa17.65■□□□□ 0.42
SEC13-218ENST00000490283 CABIN1Q9Y6J0 2220 aa17.64■□□□□ 0.42
SEC13-218ENST00000490283 FAM221BA6H8Z2 402 aa17.64■□□□□ 0.41
SEC13-218ENST00000490283 AREL1O15033 823 aa17.64■□□□□ 0.41
SEC13-218ENST00000490283 INSIG1O15503 277 aa17.64■□□□□ 0.41
SEC13-218ENST00000490283 AKR1B10O60218 316 aa17.64■□□□□ 0.41
SEC13-218ENST00000490283 SDC3O75056 442 aa17.64■□□□□ 0.41
SEC13-218ENST00000490283 TM7SF2O76062 418 aa17.64■□□□□ 0.41
SEC13-218ENST00000490283 PIGNO95427 931 aa17.64■□□□□ 0.41
SEC13-218ENST00000490283 CDK4P11802 303 aa17.64■□□□□ 0.41
SEC13-218ENST00000490283 CSNK1DP48730 415 aa17.64■□□□□ 0.41
SEC13-218ENST00000490283 ZNF235Q14590 738 aa17.64■□□□□ 0.41
SEC13-218ENST00000490283 SLC18A3Q16572 532 aa17.64■□□□□ 0.41
SEC13-218ENST00000490283 LRRC73Q5JTD7 316 aa17.64■□□□□ 0.41
SEC13-218ENST00000490283 TMCO4Q5TGY1 634 aa17.64■□□□□ 0.41
SEC13-218ENST00000490283 POLNQ7Z5Q5 900 aa17.64■□□□□ 0.41
SEC13-218ENST00000490283 SRLQ86TD4 932 aa17.64■□□□□ 0.41
SEC13-218ENST00000490283 TSEN2Q8NCE0 465 aaKnown RBP17.64■□□□□ 0.41
SEC13-218ENST00000490283 GATA6Q92908 595 aa17.64■□□□□ 0.41
SEC13-218ENST00000490283 ZNF599Q96NL3 588 aa17.64■□□□□ 0.41
SEC13-218ENST00000490283 CSPG4P5Q96PW8 444 aa17.64■□□□□ 0.41
SEC13-218ENST00000490283 DNAJC7Q99615 494 aa17.64■□□□□ 0.41
SEC13-218ENST00000490283 ANP32EQ9BTT0 268 aa17.64■□□□□ 0.41
SEC13-218ENST00000490283 TOR4AQ9NXH8 423 aa17.64■□□□□ 0.41
SEC13-218ENST00000490283 SEPT3Q9UH03 358 aa17.64■□□□□ 0.41
SEC13-218ENST00000490283 GGT7Q9UJ14 662 aa17.64■□□□□ 0.41
SEC13-218ENST00000490283 TMEM131Q92545 1883 aa17.64■□□□□ 0.41
SEC13-218ENST00000490283 CHD8Q9HCK8 2581 aa17.63■□□□□ 0.41
SEC13-218ENST00000490283 SSU72P8A0A1W2PR75 194 aa17.63■□□□□ 0.41
SEC13-218ENST00000490283 H3BM21 787 aa17.63■□□□□ 0.41
SEC13-218ENST00000490283 MMP20O60882 483 aa17.63■□□□□ 0.41
SEC13-218ENST00000490283 ALPPL2P10696 532 aa17.63■□□□□ 0.41
SEC13-218ENST00000490283 TCF4P15884 667 aa17.63■□□□□ 0.41
SEC13-218ENST00000490283 TIMP2P16035 220 aa17.63■□□□□ 0.41
SEC13-218ENST00000490283 AMPD1P23109 780 aa17.63■□□□□ 0.41
SEC13-218ENST00000490283 CDH6P55285 790 aa17.63■□□□□ 0.41
SEC13-218ENST00000490283 HNRNPKP61978 463 aaKnown RBP eCLIP17.63■□□□□ 0.41
SEC13-218ENST00000490283 BCL2L1Q07817 233 aa17.63■□□□□ 0.41
SEC13-218ENST00000490283 FGL2Q14314 439 aa17.63■□□□□ 0.41
SEC13-218ENST00000490283 LBRQ14739 615 aaKnown RBP17.63■□□□□ 0.41
SEC13-218ENST00000490283 VSTM4Q8IW00 320 aa17.63■□□□□ 0.41
SEC13-218ENST00000490283 ATPAF2Q8N5M1 289 aa17.63■□□□□ 0.41
SEC13-218ENST00000490283 WRAP53Q9BUR4 548 aaKnown RBP17.63■□□□□ 0.41
SEC13-218ENST00000490283 PCDH18Q9HCL0 1135 aa17.63■□□□□ 0.41
SEC13-218ENST00000490283 DNAJC28Q9NX36 388 aa17.63■□□□□ 0.41
SEC13-218ENST00000490283 RCOR3Q9P2K3 495 aaPredicted RBP17.63■□□□□ 0.41
SEC13-218ENST00000490283 PCDHGA1Q9Y5H4 931 aa17.63■□□□□ 0.41
SEC13-218ENST00000490283 POM121BA6NF01 834 aa17.62■□□□□ 0.41
SEC13-218ENST00000490283 NEMP2A6NFY4 417 aa17.62■□□□□ 0.41
SEC13-218ENST00000490283 RAD51BO15315 384 aa17.62■□□□□ 0.41
SEC13-218ENST00000490283 RFPL3O75679 317 aa17.62■□□□□ 0.41
SEC13-218ENST00000490283 C1SP09871 688 aa17.62■□□□□ 0.41
SEC13-218ENST00000490283 GJC1P36383 396 aa17.62■□□□□ 0.41
SEC13-218ENST00000490283 HSPA9P38646 679 aaKnown RBP17.62■□□□□ 0.41
SEC13-218ENST00000490283 THOP1P52888 689 aa17.62■□□□□ 0.41
SEC13-218ENST00000490283 AP1S1P61966 158 aa17.62■□□□□ 0.41
SEC13-218ENST00000490283 SLC25A11Q02978 314 aaKnown RBP17.62■□□□□ 0.41
SEC13-218ENST00000490283 NSUN2Q08J23 767 aaKnown RBP eCLIP17.62■□□□□ 0.41
SEC13-218ENST00000490283 PDE1CQ14123 709 aaPredicted RBP17.62■□□□□ 0.41
SEC13-218ENST00000490283 PTK2BQ14289 1009 aa17.62■□□□□ 0.41
SEC13-218ENST00000490283 UGP2Q16851 508 aa17.62■□□□□ 0.41
SEC13-218ENST00000490283 ZFYVE27Q5T4F4 411 aa17.62■□□□□ 0.41
SEC13-218ENST00000490283 ARHGAP36Q6ZRI8 547 aa17.62■□□□□ 0.41
SEC13-218ENST00000490283 PARGQ86W56 976 aa17.62■□□□□ 0.41
SEC13-218ENST00000490283 BMFQ96LC9 184 aa17.62■□□□□ 0.41
SEC13-218ENST00000490283 CCDC42Q96M95 316 aa17.62■□□□□ 0.41
SEC13-218ENST00000490283 ABHD10Q9NUJ1 306 aa17.62■□□□□ 0.41
SEC13-218ENST00000490283 CEP295Q9C0D2 2601 aa17.62■□□□□ 0.41
SEC13-218ENST00000490283 TSPAN11A1L157 253 aa17.61■□□□□ 0.41
SEC13-218ENST00000490283 TOR1BO14657 336 aa17.61■□□□□ 0.41
SEC13-218ENST00000490283 SPINT1O43278 529 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms