RNA–Protein interactions for RNA: ENST00000489378.5

SSBP1-212, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 1,434 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-212ENST00000489378 IL36AQ9UHA7 158 aa9.33□□□□□ -0.92
SSBP1-212ENST00000489378 GGT7Q9UJ14 662 aa9.33□□□□□ -0.92
SSBP1-212ENST00000489378 VPS28Q9UK41 221 aa9.33□□□□□ -0.92
SSBP1-212ENST00000489378 APPL1Q9UKG1 709 aa9.33□□□□□ -0.92
SSBP1-212ENST00000489378 PCDHGA3Q9Y5H0 932 aa9.33□□□□□ -0.92
SSBP1-212ENST00000489378 B3GALT1Q9Y5Z6 326 aa9.33□□□□□ -0.92
SSBP1-212ENST00000489378 LRP4O75096 1905 aa9.33□□□□□ -0.92
SSBP1-212ENST00000489378 ARHGEF17Q96PE2 2063 aaPredicted RBP9.32□□□□□ -0.92
SSBP1-212ENST00000489378 M0QYT0 321 aa9.32□□□□□ -0.92
SSBP1-212ENST00000489378 O00370 1275 aa9.32□□□□□ -0.92
SSBP1-212ENST00000489378 RAD1O60671 282 aa9.32□□□□□ -0.92
SSBP1-212ENST00000489378 APOEP02649 317 aa9.32□□□□□ -0.92
SSBP1-212ENST00000489378 SETSIPP0DME0 302 aa9.32□□□□□ -0.92
SSBP1-212ENST00000489378 CD19P15391 556 aa9.32□□□□□ -0.92
SSBP1-212ENST00000489378 EIF4A3P38919 411 aaKnown RBP9.32□□□□□ -0.92
SSBP1-212ENST00000489378 CBLBQ13191 982 aa9.32□□□□□ -0.92
SSBP1-212ENST00000489378 ELOCQ15369 112 aa9.32□□□□□ -0.92
SSBP1-212ENST00000489378 KRTAP21-3Q3LHN1 58 aa9.32□□□□□ -0.92
SSBP1-212ENST00000489378 CERCAMQ5T4B2 595 aa9.32□□□□□ -0.92
SSBP1-212ENST00000489378 SYPL2Q5VXT5 272 aa9.32□□□□□ -0.92
SSBP1-212ENST00000489378 MACC1Q6ZN28 852 aa9.32□□□□□ -0.92
SSBP1-212ENST00000489378 DPY19L3Q6ZPD9 716 aa9.32□□□□□ -0.92
SSBP1-212ENST00000489378 ASB18Q6ZVZ8 466 aa9.32□□□□□ -0.92
SSBP1-212ENST00000489378 VPS36Q86VN1 386 aa9.32□□□□□ -0.92
SSBP1-212ENST00000489378 HID1Q8IV36 788 aa9.32□□□□□ -0.92
SSBP1-212ENST00000489378 UNC5BQ8IZJ1 945 aa9.32□□□□□ -0.92
SSBP1-212ENST00000489378 TTC39CQ8N584 583 aa9.32□□□□□ -0.92
SSBP1-212ENST00000489378 CCDC150Q8NCX0 1101 aa9.32□□□□□ -0.92
SSBP1-212ENST00000489378 DENND6BQ8NEG7 585 aa9.32□□□□□ -0.92
SSBP1-212ENST00000489378 GPR156Q8NFN8 814 aa9.32□□□□□ -0.92
SSBP1-212ENST00000489378 CPT1CQ8TCG5 803 aa9.32□□□□□ -0.92
SSBP1-212ENST00000489378 TMEM174Q8WUU8 243 aa9.32□□□□□ -0.92
SSBP1-212ENST00000489378 SLC35F5Q8WV83 523 aa9.32□□□□□ -0.92
SSBP1-212ENST00000489378 TSACCQ96A04 125 aaPredicted RBP9.32□□□□□ -0.92
SSBP1-212ENST00000489378 BTN2A3PQ96KV6 586 aa9.32□□□□□ -0.92
SSBP1-212ENST00000489378 CCDC114Q96M63 670 aa9.32□□□□□ -0.92
SSBP1-212ENST00000489378 TAAR9Q96RI9 348 aa9.32□□□□□ -0.92
SSBP1-212ENST00000489378 PSMB7Q99436 277 aa9.32□□□□□ -0.92
SSBP1-212ENST00000489378 EDEM3Q9BZQ6 932 aa9.32□□□□□ -0.92
SSBP1-212ENST00000489378 MIS12Q9H081 205 aa9.32□□□□□ -0.92
SSBP1-212ENST00000489378 KCTD10Q9H3F6 313 aa9.32□□□□□ -0.92
SSBP1-212ENST00000489378 DONSONQ9NYP3 566 aa9.32□□□□□ -0.92
SSBP1-212ENST00000489378 ITM2BQ9Y287 266 aa9.32□□□□□ -0.92
SSBP1-212ENST00000489378 MED13LQ71F56 2210 aa9.32□□□□□ -0.92
SSBP1-212ENST00000489378 CCDC168Q8NDH2 2452 aa9.32□□□□□ -0.92
SSBP1-212ENST00000489378 ZNF106Q9H2Y7 1883 aaKnown RBP9.31□□□□□ -0.92
SSBP1-212ENST00000489378 TTLL8A6PVC2 850 aa9.31□□□□□ -0.92
SSBP1-212ENST00000489378 AP1G1O43747 822 aa9.31□□□□□ -0.92
SSBP1-212ENST00000489378 ENDOD1O94919 500 aa9.31□□□□□ -0.92
SSBP1-212ENST00000489378 ALPIP09923 528 aa9.31□□□□□ -0.92
SSBP1-212ENST00000489378 BRD2P25440 801 aaKnown RBP9.31□□□□□ -0.92
SSBP1-212ENST00000489378 ABL2P42684 1182 aa9.31□□□□□ -0.92
SSBP1-212ENST00000489378 GSK3AP49840 483 aa9.31□□□□□ -0.92
SSBP1-212ENST00000489378 HK3P52790 923 aa9.31□□□□□ -0.92
SSBP1-212ENST00000489378 AMPD3Q01432 767 aa9.31□□□□□ -0.92
SSBP1-212ENST00000489378 SEPT6Q14141 434 aa9.31□□□□□ -0.92
SSBP1-212ENST00000489378 ALG11Q2TAA5 492 aa9.31□□□□□ -0.92
SSBP1-212ENST00000489378 EIF2S3LQ2VIR3 472 aaKnown RBP9.31□□□□□ -0.92
SSBP1-212ENST00000489378 MAP9Q49MG5 647 aa9.31□□□□□ -0.92
SSBP1-212ENST00000489378 KCTD16Q68DU8 428 aa9.31□□□□□ -0.92
SSBP1-212ENST00000489378 TCTN3Q6NUS6 607 aa9.31□□□□□ -0.92
SSBP1-212ENST00000489378 FBXL22Q6P050 247 aa9.31□□□□□ -0.92
SSBP1-212ENST00000489378 LINGO4Q6UY18 593 aa9.31□□□□□ -0.92
SSBP1-212ENST00000489378 PARS2Q7L3T8 475 aaKnown RBP9.31□□□□□ -0.92
SSBP1-212ENST00000489378 RD3Q7Z3Z2 195 aa9.31□□□□□ -0.92
SSBP1-212ENST00000489378 OR6C4Q8NGE1 309 aa9.31□□□□□ -0.92
SSBP1-212ENST00000489378 ASB12Q8WXK4 309 aa9.31□□□□□ -0.92
SSBP1-212ENST00000489378 TFAP2BQ92481 460 aa9.31□□□□□ -0.92
SSBP1-212ENST00000489378 ART4Q93070 314 aa9.31□□□□□ -0.92
SSBP1-212ENST00000489378 TCTN2Q96GX1 697 aa9.31□□□□□ -0.92
SSBP1-212ENST00000489378 PPP1R16AQ96I34 528 aa9.31□□□□□ -0.92
SSBP1-212ENST00000489378 TMX3Q96JJ7 454 aa9.31□□□□□ -0.92
SSBP1-212ENST00000489378 GPN2Q9H9Y4 310 aaPredicted RBP9.31□□□□□ -0.92
SSBP1-212ENST00000489378 MBNL1Q9NR56 388 aaKnown RBP9.31□□□□□ -0.92
SSBP1-212ENST00000489378 AKAP7Q9P0M2 348 aaPredicted RBP9.31□□□□□ -0.92
SSBP1-212ENST00000489378 VPS51Q9UID3 782 aa9.31□□□□□ -0.92
SSBP1-212ENST00000489378 CSMD2Q7Z408 3487 aa9.31□□□□□ -0.92
SSBP1-212ENST00000489378 TNRC6AQ8NDV7 1962 aaKnown RBP9.31□□□□□ -0.92
SSBP1-212ENST00000489378 LOC101059948A0A1B0GTJ6 334 aa9.31□□□□□ -0.92
SSBP1-212ENST00000489378 KCNU1A8MYU2 1149 aa9.31□□□□□ -0.92
SSBP1-212ENST00000489378 B4GAT1O43505 415 aa9.31□□□□□ -0.92
SSBP1-212ENST00000489378 TSPAN6O43657 245 aa9.31□□□□□ -0.92
SSBP1-212ENST00000489378 ZNF821O75541 412 aaPredicted RBP9.31□□□□□ -0.92
SSBP1-212ENST00000489378 PDGFAP04085 211 aa9.31□□□□□ -0.92
SSBP1-212ENST00000489378 CTSEP14091 401 aa9.31□□□□□ -0.92
SSBP1-212ENST00000489378 PRF1P14222 555 aa9.31□□□□□ -0.92
SSBP1-212ENST00000489378 GLB1P16278 677 aa9.31□□□□□ -0.92
SSBP1-212ENST00000489378 L1CAMP32004 1257 aa9.31□□□□□ -0.92
SSBP1-212ENST00000489378 YPEL5P62699 121 aa9.31□□□□□ -0.92
SSBP1-212ENST00000489378 PITX1P78337 314 aaPredicted RBP9.31□□□□□ -0.92
SSBP1-212ENST00000489378 B4GALNT1Q00973 533 aa9.31□□□□□ -0.92
SSBP1-212ENST00000489378 STK4Q13043 487 aa9.31□□□□□ -0.92
SSBP1-212ENST00000489378 MRPL49Q13405 166 aaKnown RBP9.31□□□□□ -0.92
SSBP1-212ENST00000489378 AMZ1Q400G9 498 aa9.31□□□□□ -0.92
SSBP1-212ENST00000489378 RABGAP1LQ5R372 815 aa9.31□□□□□ -0.92
SSBP1-212ENST00000489378 TTC39BQ5VTQ0 682 aaPredicted RBP9.31□□□□□ -0.92
SSBP1-212ENST00000489378 C16orf46Q6P387 395 aa9.31□□□□□ -0.92
SSBP1-212ENST00000489378 C22orf39Q6P5X5 142 aa9.31□□□□□ -0.92
SSBP1-212ENST00000489378 GKN2Q86XP6 184 aa9.31□□□□□ -0.92
SSBP1-212ENST00000489378 KIAA0895Q8NCT3 520 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms