RNA–Protein interactions for RNA: ENST00000489352.5

HDAC6-233, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 585 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-233ENST00000489352 TESK1Q15569 626 aa11.69□□□□□ -0.54
HDAC6-233ENST00000489352 ALG11Q2TAA5 492 aa11.69□□□□□ -0.54
HDAC6-233ENST00000489352 OGFOD3Q6PK18 319 aa11.69□□□□□ -0.54
HDAC6-233ENST00000489352 CIR1Q86X95 450 aaPredicted RBP11.69□□□□□ -0.54
HDAC6-233ENST00000489352 NELFCDQ8IXH7 590 aa11.69□□□□□ -0.54
HDAC6-233ENST00000489352 TATDN2Q93075 761 aa11.69□□□□□ -0.54
HDAC6-233ENST00000489352 RAB7BQ96AH8 199 aa11.69□□□□□ -0.54
HDAC6-233ENST00000489352 ARHGEF26Q96DR7 871 aa11.69□□□□□ -0.54
HDAC6-233ENST00000489352 C19orf60Q96EN9 201 aa11.69□□□□□ -0.54
HDAC6-233ENST00000489352 FCRL2Q96LA5 508 aaPredicted RBP11.69□□□□□ -0.54
HDAC6-233ENST00000489352 DPYSL5Q9BPU6 564 aa11.69□□□□□ -0.54
HDAC6-233ENST00000489352 ACSS2Q9NR19 701 aa11.69□□□□□ -0.54
HDAC6-233ENST00000489352 RCOR3Q9P2K3 495 aaPredicted RBP11.69□□□□□ -0.54
HDAC6-233ENST00000489352 TFIP11Q9UBB9 837 aaKnown RBP11.69□□□□□ -0.54
HDAC6-233ENST00000489352 CROTQ9UKG9 612 aa11.69□□□□□ -0.54
HDAC6-233ENST00000489352 TULP2O00295 520 aa11.68□□□□□ -0.54
HDAC6-233ENST00000489352 TGFB1I1O43294 461 aa11.68□□□□□ -0.54
HDAC6-233ENST00000489352 TM7SF2O76062 418 aa11.68□□□□□ -0.54
HDAC6-233ENST00000489352 ENDOD1O94919 500 aa11.68□□□□□ -0.54
HDAC6-233ENST00000489352 HLA-DRAP01903 254 aa11.68□□□□□ -0.54
HDAC6-233ENST00000489352 LTFP02788 710 aa11.68□□□□□ -0.54
HDAC6-233ENST00000489352 FURINP09958 794 aa11.68□□□□□ -0.54
HDAC6-233ENST00000489352 COX6B1P14854 86 aa11.68□□□□□ -0.54
HDAC6-233ENST00000489352 CD1EP15812 388 aa11.68□□□□□ -0.54
HDAC6-233ENST00000489352 HOXD13P35453 343 aa11.68□□□□□ -0.54
HDAC6-233ENST00000489352 DNA2P51530 1060 aa11.68□□□□□ -0.54
HDAC6-233ENST00000489352 CCL11P51671 97 aa11.68□□□□□ -0.54
HDAC6-233ENST00000489352 DAOAP59103 153 aa11.68□□□□□ -0.54
HDAC6-233ENST00000489352 CLDN10P78369 228 aa11.68□□□□□ -0.54
HDAC6-233ENST00000489352 CDK18Q07002 472 aa11.68□□□□□ -0.54
HDAC6-233ENST00000489352 BST2Q10589 180 aaKnown RBP11.68□□□□□ -0.54
HDAC6-233ENST00000489352 GOLGA7BQ2TAP0 167 aa11.68□□□□□ -0.54
HDAC6-233ENST00000489352 ZACNQ401N2 412 aa11.68□□□□□ -0.54
HDAC6-233ENST00000489352 SPECC1LQ69YQ0 1117 aa11.68□□□□□ -0.54
HDAC6-233ENST00000489352 ZNF438Q7Z4V0 828 aa11.68□□□□□ -0.54
HDAC6-233ENST00000489352 TMEM135Q86UB9 458 aa11.68□□□□□ -0.54
HDAC6-233ENST00000489352 IQCKQ8N0W5 287 aa11.68□□□□□ -0.54
HDAC6-233ENST00000489352 TTC39CQ8N584 583 aa11.68□□□□□ -0.54
HDAC6-233ENST00000489352 ZNF507Q8TCN5 953 aa11.68□□□□□ -0.54
HDAC6-233ENST00000489352 BTN2A3PQ96KV6 586 aa11.68□□□□□ -0.54
HDAC6-233ENST00000489352 RBM15Q96T37 977 aaKnown RBP eCLIP11.68□□□□□ -0.54
HDAC6-233ENST00000489352 C2orf49Q9BVC5 232 aaPredicted RBP11.68□□□□□ -0.54
HDAC6-233ENST00000489352 NIF3L1Q9GZT8 377 aa11.68□□□□□ -0.54
HDAC6-233ENST00000489352 TNKS2Q9H2K2 1166 aa11.68□□□□□ -0.54
HDAC6-233ENST00000489352 CGNQ9P2M7 1197 aaKnown RBP11.68□□□□□ -0.54
HDAC6-233ENST00000489352 COPG2Q9UBF2 871 aa11.68□□□□□ -0.54
HDAC6-233ENST00000489352 LIMCH1Q9UPQ0 1083 aa11.68□□□□□ -0.54
HDAC6-233ENST00000489352 HS3ST2Q9Y278 367 aa11.68□□□□□ -0.54
HDAC6-233ENST00000489352 TMEM184BQ9Y519 407 aaPredicted RBP11.68□□□□□ -0.54
HDAC6-233ENST00000489352 PCDHGA9Q9Y5G4 932 aaKnown RBP11.68□□□□□ -0.54
HDAC6-233ENST00000489352 MT-CO1P00395 513 aa11.67□□□□□ -0.54
HDAC6-233ENST00000489352 SNRPB2P08579 225 aaKnown RBP11.67□□□□□ -0.54
HDAC6-233ENST00000489352 RRM1P23921 792 aa11.67□□□□□ -0.54
HDAC6-233ENST00000489352 CD1CP29017 333 aa11.67□□□□□ -0.54
HDAC6-233ENST00000489352 GJB2P29033 226 aa11.67□□□□□ -0.54
HDAC6-233ENST00000489352 CASP14P31944 242 aa11.67□□□□□ -0.54
HDAC6-233ENST00000489352 STAT1P42224 750 aa11.67□□□□□ -0.54
HDAC6-233ENST00000489352 STAT6P42226 847 aa11.67□□□□□ -0.54
HDAC6-233ENST00000489352 DNM1Q05193 864 aaKnown RBP11.67□□□□□ -0.54
HDAC6-233ENST00000489352 CHRNA6Q15825 494 aa11.67□□□□□ -0.54
HDAC6-233ENST00000489352 ARHGAP17Q68EM7 881 aa11.67□□□□□ -0.54
HDAC6-233ENST00000489352 CXorf57Q6NSI4 855 aaKnown RBP11.67□□□□□ -0.54
HDAC6-233ENST00000489352 DPY19L3Q6ZPD9 716 aa11.67□□□□□ -0.54
HDAC6-233ENST00000489352 CCDC73Q6ZRK6 1079 aa11.67□□□□□ -0.54
HDAC6-233ENST00000489352 LYSMD3Q7Z3D4 306 aa11.67□□□□□ -0.54
HDAC6-233ENST00000489352 XYLT1Q86Y38 959 aa11.67□□□□□ -0.54
HDAC6-233ENST00000489352 ATP6V0D2Q8N8Y2 350 aa11.67□□□□□ -0.54
HDAC6-233ENST00000489352 PLEKHO2Q8TD55 490 aa11.67□□□□□ -0.54
HDAC6-233ENST00000489352 IRGQQ8WZA9 623 aa11.67□□□□□ -0.54
HDAC6-233ENST00000489352 PNPLA2Q96AD5 504 aa11.67□□□□□ -0.54
HDAC6-233ENST00000489352 SNRNP40Q96DI7 357 aaKnown RBP11.67□□□□□ -0.54
HDAC6-233ENST00000489352 HEPHQ9BQS7 1158 aa11.67□□□□□ -0.54
HDAC6-233ENST00000489352 TRIM55Q9BYV6 548 aa11.67□□□□□ -0.54
HDAC6-233ENST00000489352 SPRY4Q9C004 299 aa11.67□□□□□ -0.54
HDAC6-233ENST00000489352 ASF1BQ9NVP2 202 aa11.67□□□□□ -0.54
HDAC6-233ENST00000489352 MAP1AP78559 2803 aaPredicted RBP11.66□□□□□ -0.54
HDAC6-233ENST00000489352 A8MU76 341 aa11.66□□□□□ -0.54
HDAC6-233ENST00000489352 K7ERQ8 282 aa11.66□□□□□ -0.54
HDAC6-233ENST00000489352 RNF103O00237 685 aa11.66□□□□□ -0.54
HDAC6-233ENST00000489352 POLR1CO15160 346 aaPredicted RBP11.66□□□□□ -0.54
HDAC6-233ENST00000489352 ZG16O60844 167 aa11.66□□□□□ -0.54
HDAC6-233ENST00000489352 THRAP10827 490 aa11.66□□□□□ -0.54
HDAC6-233ENST00000489352 F8A1P23610 371 aa11.66□□□□□ -0.54
HDAC6-233ENST00000489352 GPR3P46089 330 aa11.66□□□□□ -0.54
HDAC6-233ENST00000489352 CLCN6P51797 869 aa11.66□□□□□ -0.54
HDAC6-233ENST00000489352 ITGA1P56199 1179 aa11.66□□□□□ -0.54
HDAC6-233ENST00000489352 MC2RQ01718 297 aa11.66□□□□□ -0.54
HDAC6-233ENST00000489352 MAP7Q14244 749 aa11.66□□□□□ -0.54
HDAC6-233ENST00000489352 NFATC4Q14934 902 aa11.66□□□□□ -0.54
HDAC6-233ENST00000489352 SMTNL2Q2TAL5 461 aa11.66□□□□□ -0.54
HDAC6-233ENST00000489352 SNAP47Q5SQN1 464 aa11.66□□□□□ -0.54
HDAC6-233ENST00000489352 NKAIN2Q5VXU1 208 aa11.66□□□□□ -0.54
HDAC6-233ENST00000489352 PARS2Q7L3T8 475 aaKnown RBP11.66□□□□□ -0.54
HDAC6-233ENST00000489352 SLC47A2Q86VL8 602 aa11.66□□□□□ -0.54
HDAC6-233ENST00000489352 HPS6Q86YV9 775 aa11.66□□□□□ -0.54
HDAC6-233ENST00000489352 IRF2BP1Q8IU81 584 aa11.66□□□□□ -0.54
HDAC6-233ENST00000489352 RHOT1Q8IXI2 618 aa11.66□□□□□ -0.54
HDAC6-233ENST00000489352 SCML4Q8N228 414 aa11.66□□□□□ -0.54
HDAC6-233ENST00000489352 UBA3Q8TBC4 463 aa11.66□□□□□ -0.54
HDAC6-233ENST00000489352 CXorf40AQ8TE69 158 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms