RNA–Protein interactions for RNA: ENST00000488908.1

CCDC93-209, Transcript of coiled-coil domain containing 93, humanhuman

TSL 5

Gene CCDC93, Length 268 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-209ENST00000488908 TUBBP07437 444 aa2.72□□□□□ -1.97
CCDC93-209ENST00000488908 FAM90A15PP0C7V4 464 aa2.72□□□□□ -1.97
CCDC93-209ENST00000488908 FAM90A14PP0C7W9 464 aa2.72□□□□□ -1.97
CCDC93-209ENST00000488908 CSRP3P50461 194 aa2.72□□□□□ -1.97
CCDC93-209ENST00000488908 CDK7P50613 346 aa2.72□□□□□ -1.97
CCDC93-209ENST00000488908 TUBB4BP68371 445 aa2.72□□□□□ -1.97
CCDC93-209ENST00000488908 SLC20A2Q08357 652 aa2.72□□□□□ -1.97
CCDC93-209ENST00000488908 CHAF1AQ13111 956 aaPredicted RBP2.72□□□□□ -1.97
CCDC93-209ENST00000488908 CAPSQ13938 189 aa2.72□□□□□ -1.97
CCDC93-209ENST00000488908 ATP13A5Q4VNC0 1218 aa2.72□□□□□ -1.97
CCDC93-209ENST00000488908 IRAK1BP1Q5VVH5 260 aa2.72□□□□□ -1.97
CCDC93-209ENST00000488908 ARHGAP17Q68EM7 881 aa2.72□□□□□ -1.97
CCDC93-209ENST00000488908 SHFQ7M4L6 423 aa2.72□□□□□ -1.97
CCDC93-209ENST00000488908 DENND6AQ8IWF6 608 aa2.72□□□□□ -1.97
CCDC93-209ENST00000488908 BRSK2Q8IWQ3 736 aa2.72□□□□□ -1.97
CCDC93-209ENST00000488908 SRBD1Q8N5C6 995 aaKnown RBP2.72□□□□□ -1.97
CCDC93-209ENST00000488908 MCPH1Q8NEM0 835 aa2.72□□□□□ -1.97
CCDC93-209ENST00000488908 ASPDHA6ND91 283 aa2.71□□□□□ -1.98
CCDC93-209ENST00000488908 MID1O15344 667 aa2.71□□□□□ -1.98
CCDC93-209ENST00000488908 HNRNPRO43390 633 aaKnown RBP2.71□□□□□ -1.98
CCDC93-209ENST00000488908 S100BP04271 92 aaPredicted RBP2.71□□□□□ -1.98
CCDC93-209ENST00000488908 WEE2P0C1S8 567 aa2.71□□□□□ -1.98
CCDC93-209ENST00000488908 LYL1P12980 280 aa2.71□□□□□ -1.98
CCDC93-209ENST00000488908 TNFSF4P23510 183 aa2.71□□□□□ -1.98
CCDC93-209ENST00000488908 DSCR10P59022 87 aa2.71□□□□□ -1.98
CCDC93-209ENST00000488908 BRWD1-AS2P59051 145 aa2.71□□□□□ -1.98
CCDC93-209ENST00000488908 PITX1P78337 314 aaPredicted RBP2.71□□□□□ -1.98
CCDC93-209ENST00000488908 IRX6P78412 446 aaPredicted RBP2.71□□□□□ -1.98
CCDC93-209ENST00000488908 GRIK2Q13002 908 aa2.71□□□□□ -1.98
CCDC93-209ENST00000488908 PLEKHG6Q3KR16 790 aa2.71□□□□□ -1.98
CCDC93-209ENST00000488908 DPP9Q86TI2 863 aa2.71□□□□□ -1.98
CCDC93-209ENST00000488908 ZC3HC1Q86WB0 502 aaKnown RBP2.71□□□□□ -1.98
CCDC93-209ENST00000488908 RASSF8Q8NHQ8 419 aa2.71□□□□□ -1.98
CCDC93-209ENST00000488908 TTC8Q8TAM2 541 aa2.71□□□□□ -1.98
CCDC93-209ENST00000488908 OTUD7AQ8TE49 926 aaPredicted RBP2.71□□□□□ -1.98
CCDC93-209ENST00000488908 CREB3L4Q8TEY5 395 aa2.71□□□□□ -1.98
CCDC93-209ENST00000488908 C17orf77Q96MU5 243 aa2.71□□□□□ -1.98
CCDC93-209ENST00000488908 ATOH8Q96SQ7 321 aa2.71□□□□□ -1.98
CCDC93-209ENST00000488908 NOX4Q9NPH5 578 aa2.71□□□□□ -1.98
CCDC93-209ENST00000488908 SLC9A2Q9UBY0 812 aa2.71□□□□□ -1.98
CCDC93-209ENST00000488908 BAG5Q9UL15 447 aa2.71□□□□□ -1.98
CCDC93-209ENST00000488908 SLC39A10Q9ULF5 831 aa2.71□□□□□ -1.98
CCDC93-209ENST00000488908 KCNS2Q9ULS6 477 aa2.71□□□□□ -1.98
CCDC93-209ENST00000488908 KCNK7Q9Y2U2 307 aa2.71□□□□□ -1.98
CCDC93-209ENST00000488908 OR6C68A6NDL8 312 aa2.7□□□□□ -1.98
CCDC93-209ENST00000488908 HSPA12AO43301 675 aa2.7□□□□□ -1.98
CCDC93-209ENST00000488908 ASNA1O43681 348 aa2.7□□□□□ -1.98
CCDC93-209ENST00000488908 RFPL2O75678 378 aa2.7□□□□□ -1.98
CCDC93-209ENST00000488908 IL1AP01583 271 aa2.7□□□□□ -1.98
CCDC93-209ENST00000488908 CTPS1P17812 591 aa2.7□□□□□ -1.98
CCDC93-209ENST00000488908 HSPA7P48741 367 aa2.7□□□□□ -1.98
CCDC93-209ENST00000488908 KRTAP12-2P59991 146 aa2.7□□□□□ -1.98
CCDC93-209ENST00000488908 MPEG1Q2M385 716 aa2.7□□□□□ -1.98
CCDC93-209ENST00000488908 AMZ1Q400G9 498 aa2.7□□□□□ -1.98
CCDC93-209ENST00000488908 SPINK14Q6IE38 97 aa2.7□□□□□ -1.98
CCDC93-209ENST00000488908 RINLQ6ZS11 566 aa2.7□□□□□ -1.98
CCDC93-209ENST00000488908 C14orf80Q86SX3 495 aa2.7□□□□□ -1.98
CCDC93-209ENST00000488908 SFTPA2Q8IWL1 248 aa2.7□□□□□ -1.98
CCDC93-209ENST00000488908 SLC24A4Q8NFF2 622 aa2.7□□□□□ -1.98
CCDC93-209ENST00000488908 PJA1Q8NG27 643 aa2.7□□□□□ -1.98
CCDC93-209ENST00000488908 OR10V1Q8NGI7 309 aa2.7□□□□□ -1.98
CCDC93-209ENST00000488908 SPATA22Q8NHS9 363 aa2.7□□□□□ -1.98
CCDC93-209ENST00000488908 ARRDC2Q8TBH0 407 aa2.7□□□□□ -1.98
CCDC93-209ENST00000488908 JDP2Q8WYK2 163 aa2.7□□□□□ -1.98
CCDC93-209ENST00000488908 RNF183Q96D59 192 aa2.7□□□□□ -1.98
CCDC93-209ENST00000488908 STK33Q9BYT3 514 aa2.7□□□□□ -1.98
CCDC93-209ENST00000488908 CLPBQ9H078 707 aa2.7□□□□□ -1.98
CCDC93-209ENST00000488908 CXorf56Q9H5V9 222 aa2.7□□□□□ -1.98
CCDC93-209ENST00000488908 OGFRQ9NZT2 677 aa2.7□□□□□ -1.98
CCDC93-209ENST00000488908 WNT9BO14905 357 aa2.69□□□□□ -1.98
CCDC93-209ENST00000488908 PLA2G6O60733 806 aa2.69□□□□□ -1.98
CCDC93-209ENST00000488908 CDH1P12830 882 aa2.69□□□□□ -1.98
CCDC93-209ENST00000488908 LUMP51884 338 aaPredicted RBP2.69□□□□□ -1.98
CCDC93-209ENST00000488908 ATPAF1Q5TC12 328 aaPredicted RBP2.69□□□□□ -1.98
CCDC93-209ENST00000488908 NFRKBQ6P4R8 1299 aa2.69□□□□□ -1.98
CCDC93-209ENST00000488908 LCTLQ6UWM7 567 aa2.69□□□□□ -1.98
CCDC93-209ENST00000488908 CCNI2Q6ZMN8 369 aaPredicted RBP2.69□□□□□ -1.98
CCDC93-209ENST00000488908 MON1AQ86VX9 555 aa2.69□□□□□ -1.98
CCDC93-209ENST00000488908 ZMIZ2Q8NF64 920 aa2.69□□□□□ -1.98
CCDC93-209ENST00000488908 OTULINQ96BN8 352 aa2.69□□□□□ -1.98
CCDC93-209ENST00000488908 C18orf8Q96DM3 657 aa2.69□□□□□ -1.98
CCDC93-209ENST00000488908 ALG14Q96F25 216 aa2.69□□□□□ -1.98
CCDC93-209ENST00000488908 BRD8Q9H0E9 1235 aa2.69□□□□□ -1.98
CCDC93-209ENST00000488908 SEPSECSQ9HD40 501 aaKnown RBP2.69□□□□□ -1.98
CCDC93-209ENST00000488908 KLHL1Q9NR64 748 aa2.69□□□□□ -1.98
CCDC93-209ENST00000488908 FAM118AQ9NWS6 357 aa2.69□□□□□ -1.98
CCDC93-209ENST00000488908 TMEM160Q9NX00 188 aa2.69□□□□□ -1.98
CCDC93-209ENST00000488908 ANKRD10Q9NXR5 420 aa2.69□□□□□ -1.98
CCDC93-209ENST00000488908 FNIP2Q9P278 1114 aa2.69□□□□□ -1.98
CCDC93-209ENST00000488908 RNF215Q9Y6U7 377 aa2.69□□□□□ -1.98
CCDC93-209ENST00000488908 ATXN2Q99700 1313 aaKnown RBP2.68□□□□□ -1.98
CCDC93-209ENST00000488908 DHX16O60231 1041 aaKnown RBP2.68□□□□□ -1.98
CCDC93-209ENST00000488908 PCDH7O60245 1069 aa2.68□□□□□ -1.98
CCDC93-209ENST00000488908 TFPIP10646 304 aa2.68□□□□□ -1.98
CCDC93-209ENST00000488908 ATF3P18847 181 aa2.68□□□□□ -1.98
CCDC93-209ENST00000488908 NR1D1P20393 614 aa2.68□□□□□ -1.98
CCDC93-209ENST00000488908 SP100P23497 879 aaPredicted RBP2.68□□□□□ -1.98
CCDC93-209ENST00000488908 AVPR2P30518 371 aa2.68□□□□□ -1.98
CCDC93-209ENST00000488908 RELQ04864 619 aaPredicted RBP2.68□□□□□ -1.98
CCDC93-209ENST00000488908 DCTN1Q14203 1278 aa2.68□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms