RNA–Protein interactions for RNA: ENST00000488860.1

TRAIP-209, Transcript of TRAF interacting protein, humanhuman

TSL 3

Gene TRAIP, Length 326 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-209ENST00000488860 BCCIPQ9P287 314 aaKnown RBP eCLIP12.45□□□□□ -0.42
TRAIP-209ENST00000488860 FAM153AQ9UHL3 310 aa12.45□□□□□ -0.42
TRAIP-209ENST00000488860 UTP11Q9Y3A2 253 aaKnown RBP12.45□□□□□ -0.42
TRAIP-209ENST00000488860 NEU2Q9Y3R4 380 aa12.45□□□□□ -0.42
TRAIP-209ENST00000488860 PCDHGC4Q9Y5F7 938 aa12.45□□□□□ -0.42
TRAIP-209ENST00000488860 RAI2Q9Y5P3 530 aa12.45□□□□□ -0.42
TRAIP-209ENST00000488860 LRRK1Q38SD2 2015 aa12.45□□□□□ -0.42
TRAIP-209ENST00000488860 SCN8AQ9UQD0 1980 aa12.44□□□□□ -0.42
TRAIP-209ENST00000488860 TNFRSF10AO00220 468 aa12.44□□□□□ -0.42
TRAIP-209ENST00000488860 PI15O43692 258 aa12.44□□□□□ -0.42
TRAIP-209ENST00000488860 CPP00450 1065 aa12.44□□□□□ -0.42
TRAIP-209ENST00000488860 APRTP07741 180 aa12.44□□□□□ -0.42
TRAIP-209ENST00000488860 RHOXF2BP0C7M4 288 aa12.44□□□□□ -0.42
TRAIP-209ENST00000488860 AOC1P19801 751 aa12.44□□□□□ -0.42
TRAIP-209ENST00000488860 CES1P23141 567 aa12.44□□□□□ -0.42
TRAIP-209ENST00000488860 RPS9P46781 194 aaKnown RBP12.44□□□□□ -0.42
TRAIP-209ENST00000488860 METAP1P53582 386 aa12.44□□□□□ -0.42
TRAIP-209ENST00000488860 COPAP53621 1224 aa12.44□□□□□ -0.42
TRAIP-209ENST00000488860 WNT3AP56704 352 aa12.44□□□□□ -0.42
TRAIP-209ENST00000488860 MTAPQ13126 283 aa12.44□□□□□ -0.42
TRAIP-209ENST00000488860 MPP3Q13368 585 aa12.44□□□□□ -0.42
TRAIP-209ENST00000488860 OLIG2Q13516 323 aa12.44□□□□□ -0.42
TRAIP-209ENST00000488860 GALNT3Q14435 633 aa12.44□□□□□ -0.42
TRAIP-209ENST00000488860 SPARCL1Q14515 664 aa12.44□□□□□ -0.42
TRAIP-209ENST00000488860 GRM3Q14832 879 aa12.44□□□□□ -0.42
TRAIP-209ENST00000488860 SYT13Q7L8C5 426 aa12.44□□□□□ -0.42
TRAIP-209ENST00000488860 PLPP6Q8IY26 295 aa12.44□□□□□ -0.42
TRAIP-209ENST00000488860 PGBD3Q8N328 593 aa12.44□□□□□ -0.42
TRAIP-209ENST00000488860 PDCD7Q8N8D1 485 aaKnown RBP12.44□□□□□ -0.42
TRAIP-209ENST00000488860 LPCAT1Q8NF37 534 aa12.44□□□□□ -0.42
TRAIP-209ENST00000488860 TSTD1Q8NFU3 115 aa12.44□□□□□ -0.42
TRAIP-209ENST00000488860 HMGB4Q8WW32 186 aa12.44□□□□□ -0.42
TRAIP-209ENST00000488860 PBXIP1Q96AQ6 731 aa12.44□□□□□ -0.42
TRAIP-209ENST00000488860 SNF8Q96H20 258 aa12.44□□□□□ -0.42
TRAIP-209ENST00000488860 PPP1R16AQ96I34 528 aa12.44□□□□□ -0.42
TRAIP-209ENST00000488860 FAM129BQ96TA1 746 aa12.44□□□□□ -0.42
TRAIP-209ENST00000488860 TBL1YQ9BQ87 522 aa12.44□□□□□ -0.42
TRAIP-209ENST00000488860 APOL2Q9BQE5 337 aa12.44□□□□□ -0.42
TRAIP-209ENST00000488860 RHOXF2Q9BQY4 288 aa12.44□□□□□ -0.42
TRAIP-209ENST00000488860 TDRD1Q9BXT4 1180 aaKnown RBP12.44□□□□□ -0.42
TRAIP-209ENST00000488860 OSBPL1AQ9BXW6 950 aa12.44□□□□□ -0.42
TRAIP-209ENST00000488860 RSPH9Q9H1X1 276 aaPredicted RBP12.44□□□□□ -0.42
TRAIP-209ENST00000488860 FBRSQ9HAH7 460 aa12.44□□□□□ -0.42
TRAIP-209ENST00000488860 SPATA6Q9NWH7 488 aaPredicted RBP12.44□□□□□ -0.42
TRAIP-209ENST00000488860 CHKBQ9Y259 395 aa12.44□□□□□ -0.42
TRAIP-209ENST00000488860 AAR2Q9Y312 384 aaKnown RBP12.44□□□□□ -0.42
TRAIP-209ENST00000488860 SNX24Q9Y343 169 aa12.44□□□□□ -0.42
TRAIP-209ENST00000488860 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.43□□□□□ -0.42
TRAIP-209ENST00000488860 FAM86C2PA6NEL3 165 aa12.43□□□□□ -0.42
TRAIP-209ENST00000488860 PLK4O00444 970 aa12.43□□□□□ -0.42
TRAIP-209ENST00000488860 DNALI1O14645 258 aaPredicted RBP12.43□□□□□ -0.42
TRAIP-209ENST00000488860 MID1O15344 667 aa12.43□□□□□ -0.42
TRAIP-209ENST00000488860 SOCS5O75159 536 aa12.43□□□□□ -0.42
TRAIP-209ENST00000488860 USP12O75317 370 aa12.43□□□□□ -0.42
TRAIP-209ENST00000488860 ADH1BP00325 375 aa12.43□□□□□ -0.42
TRAIP-209ENST00000488860 DNTTP04053 509 aa12.43□□□□□ -0.42
TRAIP-209ENST00000488860 NDUFV2P19404 249 aa12.43□□□□□ -0.42
TRAIP-209ENST00000488860 MAGEA9P43362 315 aa12.43□□□□□ -0.42
TRAIP-209ENST00000488860 RPL21P46778 160 aaKnown RBP12.43□□□□□ -0.42
TRAIP-209ENST00000488860 DGKEP52429 567 aa12.43□□□□□ -0.42
TRAIP-209ENST00000488860 EPHB1P54762 984 aa12.43□□□□□ -0.42
TRAIP-209ENST00000488860 RPS14P62263 151 aaKnown RBP12.43□□□□□ -0.42
TRAIP-209ENST00000488860 SATB1Q01826 763 aa12.43□□□□□ -0.42
TRAIP-209ENST00000488860 GUCY2DQ02846 1103 aa12.43□□□□□ -0.42
TRAIP-209ENST00000488860 SEMA5AQ13591 1074 aa12.43□□□□□ -0.42
TRAIP-209ENST00000488860 IHHQ14623 411 aa12.43□□□□□ -0.42
TRAIP-209ENST00000488860 CST6Q15828 149 aa12.43□□□□□ -0.42
TRAIP-209ENST00000488860 LRRC73Q5JTD7 316 aa12.43□□□□□ -0.42
TRAIP-209ENST00000488860 ARMC12Q5T9G4 340 aa12.43□□□□□ -0.42
TRAIP-209ENST00000488860 FAM46CQ5VWP2 391 aa12.43□□□□□ -0.42
TRAIP-209ENST00000488860 ANO7Q6IWH7 933 aa12.43□□□□□ -0.42
TRAIP-209ENST00000488860 KDELC1Q6UW63 502 aa12.43□□□□□ -0.42
TRAIP-209ENST00000488860 PPP1R21Q6ZMI0 780 aa12.43□□□□□ -0.42
TRAIP-209ENST00000488860 TMPRSS6Q8IU80 811 aa12.43□□□□□ -0.42
TRAIP-209ENST00000488860 SPEM1Q8N4L4 309 aa12.43□□□□□ -0.42
TRAIP-209ENST00000488860 SLC25A41Q8N5S1 370 aa12.43□□□□□ -0.42
TRAIP-209ENST00000488860 GANCQ8TET4 914 aa12.43□□□□□ -0.42
TRAIP-209ENST00000488860 PRCCQ92733 491 aaPredicted RBP12.43□□□□□ -0.42
TRAIP-209ENST00000488860 ARRDC3Q96B67 414 aa12.43□□□□□ -0.42
TRAIP-209ENST00000488860 MRGPRX2Q96LB1 330 aa12.43□□□□□ -0.42
TRAIP-209ENST00000488860 ERP44Q9BS26 406 aa12.43□□□□□ -0.42
TRAIP-209ENST00000488860 CPEB1Q9BZB8 566 aaKnown RBP12.43□□□□□ -0.42
TRAIP-209ENST00000488860 MKRN2Q9H000 416 aaKnown RBP12.43□□□□□ -0.42
TRAIP-209ENST00000488860 SUV39H2Q9H5I1 410 aa12.43□□□□□ -0.42
TRAIP-209ENST00000488860 EPHX3Q9H6B9 360 aa12.43□□□□□ -0.42
TRAIP-209ENST00000488860 LRRC40Q9H9A6 602 aa12.43□□□□□ -0.42
TRAIP-209ENST00000488860 VPS45Q9NRW7 570 aa12.43□□□□□ -0.42
TRAIP-209ENST00000488860 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.43□□□□□ -0.42
TRAIP-209ENST00000488860 SARDHQ9UL12 918 aa12.43□□□□□ -0.42
TRAIP-209ENST00000488860 PCDHB9Q9Y5E1 797 aa12.43□□□□□ -0.42
TRAIP-209ENST00000488860 V9GYY5 206 aaPredicted RBP12.43□□□□□ -0.42
TRAIP-209ENST00000488860 BDP1A6H8Y1 2624 aa12.43□□□□□ -0.42
TRAIP-209ENST00000488860 CEP192Q8TEP8 1941 aa12.43□□□□□ -0.42
TRAIP-209ENST00000488860 A0A1W2PP55 124 aa12.42□□□□□ -0.42
TRAIP-209ENST00000488860 TCRBV7S3A2A0A539 114 aa12.42□□□□□ -0.42
TRAIP-209ENST00000488860 ESYT3A0FGR9 886 aa12.42□□□□□ -0.42
TRAIP-209ENST00000488860 GOLGA8MH3BSY2 632 aa12.42□□□□□ -0.42
TRAIP-209ENST00000488860 PSMD3O43242 534 aa12.42□□□□□ -0.42
TRAIP-209ENST00000488860 ALDH1A2O94788 518 aa12.42□□□□□ -0.42
TRAIP-209ENST00000488860 AP2A1O95782 977 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms