RNA–Protein interactions for RNA: ENST00000488155.1

NIPAL3-207, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best)

Gene NIPAL3, Length 931 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-207ENST00000488155 HNF1BP35680 557 aa11.44□□□□□ -0.58
NIPAL3-207ENST00000488155 PAPOLAP51003 745 aaKnown RBP11.44□□□□□ -0.58
NIPAL3-207ENST00000488155 AIF1P55008 147 aa11.44□□□□□ -0.58
NIPAL3-207ENST00000488155 ZNF211Q13398 564 aaPredicted RBP11.44□□□□□ -0.58
NIPAL3-207ENST00000488155 FZD2Q14332 565 aa11.44□□□□□ -0.58
NIPAL3-207ENST00000488155 NR1I3Q14994 352 aa11.44□□□□□ -0.58
NIPAL3-207ENST00000488155 TCEA2Q15560 299 aa11.44□□□□□ -0.58
NIPAL3-207ENST00000488155 PROX2Q3B8N5 592 aa11.44□□□□□ -0.58
NIPAL3-207ENST00000488155 PARP15Q460N3 678 aa11.44□□□□□ -0.58
NIPAL3-207ENST00000488155 INO80DQ53TQ3 878 aaPredicted RBP11.44□□□□□ -0.58
NIPAL3-207ENST00000488155 ERMARDQ5T6L9 678 aa11.44□□□□□ -0.58
NIPAL3-207ENST00000488155 KYAT3Q6YP21 454 aaKnown RBP11.44□□□□□ -0.58
NIPAL3-207ENST00000488155 ARHGAP36Q6ZRI8 547 aa11.44□□□□□ -0.58
NIPAL3-207ENST00000488155 LUZP1Q86V48 1076 aa11.44□□□□□ -0.58
NIPAL3-207ENST00000488155 TP53INP2Q8IXH6 220 aa11.44□□□□□ -0.58
NIPAL3-207ENST00000488155 UMODL1-AS1Q8N2C9 162 aa11.44□□□□□ -0.58
NIPAL3-207ENST00000488155 OR4C6Q8NH72 309 aa11.44□□□□□ -0.58
NIPAL3-207ENST00000488155 CXorf40AQ8TE69 158 aa11.44□□□□□ -0.58
NIPAL3-207ENST00000488155 CPLX3Q8WVH0 158 aa11.44□□□□□ -0.58
NIPAL3-207ENST00000488155 DCBLD2Q96PD2 775 aa11.44□□□□□ -0.58
NIPAL3-207ENST00000488155 FUCA2Q9BTY2 467 aa11.44□□□□□ -0.58
NIPAL3-207ENST00000488155 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.44□□□□□ -0.58
NIPAL3-207ENST00000488155 OSBPL1AQ9BXW6 950 aa11.44□□□□□ -0.58
NIPAL3-207ENST00000488155 TCEAL2Q9H3H9 227 aaPredicted RBP11.44□□□□□ -0.58
NIPAL3-207ENST00000488155 LRRC19Q9H756 370 aa11.44□□□□□ -0.58
NIPAL3-207ENST00000488155 AIPL1Q9NZN9 384 aa11.44□□□□□ -0.58
NIPAL3-207ENST00000488155 KLF15Q9UIH9 416 aa11.44□□□□□ -0.58
NIPAL3-207ENST00000488155 AK5Q9Y6K8 562 aa11.44□□□□□ -0.58
NIPAL3-207ENST00000488155 SPTY2D1-AS1A0A0U1RR47 76 aa11.43□□□□□ -0.58
NIPAL3-207ENST00000488155 CXorf51AA0A1B0GTR3 108 aa11.43□□□□□ -0.58
NIPAL3-207ENST00000488155 A0A1W2PQC6 194 aa11.43□□□□□ -0.58
NIPAL3-207ENST00000488155 ARHGAP42A6NI28 874 aa11.43□□□□□ -0.58
NIPAL3-207ENST00000488155 DFFAO00273 331 aa11.43□□□□□ -0.58
NIPAL3-207ENST00000488155 AREL1O15033 823 aa11.43□□□□□ -0.58
NIPAL3-207ENST00000488155 PRPSAP2O60256 369 aa11.43□□□□□ -0.58
NIPAL3-207ENST00000488155 TM7SF2O76062 418 aa11.43□□□□□ -0.58
NIPAL3-207ENST00000488155 GZMAP12544 262 aa11.43□□□□□ -0.58
NIPAL3-207ENST00000488155 JUNDP17535 347 aa11.43□□□□□ -0.58
NIPAL3-207ENST00000488155 ERCC2P18074 760 aa11.43□□□□□ -0.58
NIPAL3-207ENST00000488155 IGFALSP35858 605 aa11.43□□□□□ -0.58
NIPAL3-207ENST00000488155 RABIFP47224 123 aa11.43□□□□□ -0.58
NIPAL3-207ENST00000488155 RGRP47804 291 aa11.43□□□□□ -0.58
NIPAL3-207ENST00000488155 FANCCQ00597 558 aa11.43□□□□□ -0.58
NIPAL3-207ENST00000488155 INSM1Q01101 510 aaPredicted RBP11.43□□□□□ -0.58
NIPAL3-207ENST00000488155 C1orf61Q13536 156 aa11.43□□□□□ -0.58
NIPAL3-207ENST00000488155 SMTNL2Q2TAL5 461 aa11.43□□□□□ -0.58
NIPAL3-207ENST00000488155 KLHL40Q2TBA0 621 aa11.43□□□□□ -0.58
NIPAL3-207ENST00000488155 COL28A1Q2UY09 1125 aa11.43□□□□□ -0.58
NIPAL3-207ENST00000488155 TDRD12Q587J7 1177 aaKnown RBP11.43□□□□□ -0.58
NIPAL3-207ENST00000488155 PPP1R2P3Q6NXS1 205 aa11.43□□□□□ -0.58
NIPAL3-207ENST00000488155 DCP2Q8IU60 420 aaKnown RBP11.43□□□□□ -0.58
NIPAL3-207ENST00000488155 CAMK1DQ8IU85 385 aa11.43□□□□□ -0.58
NIPAL3-207ENST00000488155 RBFAQ8N0V3 343 aa11.43□□□□□ -0.58
NIPAL3-207ENST00000488155 PAF1Q8N7H5 531 aa11.43□□□□□ -0.58
NIPAL3-207ENST00000488155 TSEN2Q8NCE0 465 aaKnown RBP11.43□□□□□ -0.58
NIPAL3-207ENST00000488155 LMX1AQ8TE12 382 aa11.43□□□□□ -0.58
NIPAL3-207ENST00000488155 CASKIN2Q8WXE0 1202 aa11.43□□□□□ -0.58
NIPAL3-207ENST00000488155 ARHGEF26Q96DR7 871 aa11.43□□□□□ -0.58
NIPAL3-207ENST00000488155 APOLD1Q96LR9 279 aa11.43□□□□□ -0.58
NIPAL3-207ENST00000488155 SP110Q9HB58 689 aa11.43□□□□□ -0.58
NIPAL3-207ENST00000488155 PDFQ9HBH1 243 aa11.43□□□□□ -0.58
NIPAL3-207ENST00000488155 CBX8Q9HC52 389 aa11.43□□□□□ -0.58
NIPAL3-207ENST00000488155 MBNL1Q9NR56 388 aaKnown RBP11.43□□□□□ -0.58
NIPAL3-207ENST00000488155 MFHAS1Q9Y4C4 1052 aa11.43□□□□□ -0.58
NIPAL3-207ENST00000488155 GPSM3Q9Y4H4 160 aa11.43□□□□□ -0.58
NIPAL3-207ENST00000488155 COL27A1Q8IZC6 1860 aaPredicted RBP11.42□□□□□ -0.58
NIPAL3-207ENST00000488155 NEMP2A6NFY4 417 aa11.42□□□□□ -0.58
NIPAL3-207ENST00000488155 K7ESM1 405 aa11.42□□□□□ -0.58
NIPAL3-207ENST00000488155 SCAMP1O15126 338 aa11.42□□□□□ -0.58
NIPAL3-207ENST00000488155 BUB1BO60566 1050 aaPredicted RBP11.42□□□□□ -0.58
NIPAL3-207ENST00000488155 PRAMEF11O60813 436 aa11.42□□□□□ -0.58
NIPAL3-207ENST00000488155 LRCH4O75427 683 aa11.42□□□□□ -0.58
NIPAL3-207ENST00000488155 PALMO75781 387 aa11.42□□□□□ -0.58
NIPAL3-207ENST00000488155 CSF2P04141 144 aa11.42□□□□□ -0.58
NIPAL3-207ENST00000488155 ALPPL2P10696 532 aa11.42□□□□□ -0.58
NIPAL3-207ENST00000488155 HOXB3P14651 431 aaPredicted RBP11.42□□□□□ -0.58
NIPAL3-207ENST00000488155 TCF4P15884 667 aa11.42□□□□□ -0.58
NIPAL3-207ENST00000488155 ACP1P24666 158 aa11.42□□□□□ -0.58
NIPAL3-207ENST00000488155 PRKCIP41743 596 aa11.42□□□□□ -0.58
NIPAL3-207ENST00000488155 NDST2P52849 883 aa11.42□□□□□ -0.58
NIPAL3-207ENST00000488155 THOP1P52888 689 aa11.42□□□□□ -0.58
NIPAL3-207ENST00000488155 HNRNPKP61978 463 aaKnown RBP eCLIP11.42□□□□□ -0.58
NIPAL3-207ENST00000488155 EIF2B5Q13144 721 aaKnown RBP11.42□□□□□ -0.58
NIPAL3-207ENST00000488155 DEFB133Q30KQ1 61 aa11.42□□□□□ -0.58
NIPAL3-207ENST00000488155 CFAP58Q5T655 872 aa11.42□□□□□ -0.58
NIPAL3-207ENST00000488155 RFX8Q6ZV50 586 aa11.42□□□□□ -0.58
NIPAL3-207ENST00000488155 CYP4V2Q6ZWL3 525 aaPredicted RBP11.42□□□□□ -0.58
NIPAL3-207ENST00000488155 SRLQ86TD4 932 aa11.42□□□□□ -0.58
NIPAL3-207ENST00000488155 PARGQ86W56 976 aa11.42□□□□□ -0.58
NIPAL3-207ENST00000488155 ZSWIM9Q86XI8 627 aa11.42□□□□□ -0.58
NIPAL3-207ENST00000488155 ARHGAP12Q8IWW6 846 aa11.42□□□□□ -0.58
NIPAL3-207ENST00000488155 NPWQ8N729 165 aa11.42□□□□□ -0.58
NIPAL3-207ENST00000488155 ZNF548Q8NEK5 533 aaPredicted RBP11.42□□□□□ -0.58
NIPAL3-207ENST00000488155 FAM174AQ8TBP5 190 aa11.42□□□□□ -0.58
NIPAL3-207ENST00000488155 CENPTQ96BT3 561 aa11.42□□□□□ -0.58
NIPAL3-207ENST00000488155 BTBD6Q96KE9 485 aa11.42□□□□□ -0.58
NIPAL3-207ENST00000488155 LENG8Q96PV6 779 aaPredicted RBP11.42□□□□□ -0.58
NIPAL3-207ENST00000488155 CPEB1Q9BZB8 566 aaKnown RBP11.42□□□□□ -0.58
NIPAL3-207ENST00000488155 SUV39H2Q9H5I1 410 aa11.42□□□□□ -0.58
NIPAL3-207ENST00000488155 ZWILCHQ9H900 591 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 83 ms