RNA–Protein interactions for RNA: ENST00000487667.5

PHF1-209, Transcript of PHD finger protein 1, humanhuman

TSL 5

Gene PHF1, Length 1,930 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-209ENST00000487667 PCMTD2Q9NV79 361 aa20.56■□□□□ 0.88
PHF1-209ENST00000487667 BIRC5O15392 142 aa20.55■□□□□ 0.88
PHF1-209ENST00000487667 CLASP2O75122 1294 aaKnown RBP20.55■□□□□ 0.88
PHF1-209ENST00000487667 VAPBO95292 243 aa20.55■□□□□ 0.88
PHF1-209ENST00000487667 ALDOAP04075 364 aaKnown RBP20.55■□□□□ 0.88
PHF1-209ENST00000487667 ATXN1LP0C7T5 689 aaKnown RBP20.55■□□□□ 0.88
PHF1-209ENST00000487667 MAGEA12P43365 314 aa20.55■□□□□ 0.88
PHF1-209ENST00000487667 CHRNA4P43681 627 aa20.55■□□□□ 0.88
PHF1-209ENST00000487667 ARCN1P48444 511 aaKnown RBP20.55■□□□□ 0.88
PHF1-209ENST00000487667 ZXDBP98169 803 aa20.55■□□□□ 0.88
PHF1-209ENST00000487667 QPCTQ16769 361 aa20.55■□□□□ 0.88
PHF1-209ENST00000487667 KDELC2Q7Z4H8 507 aa20.55■□□□□ 0.88
PHF1-209ENST00000487667 FGFR1OP2Q9NVK5 253 aa20.55■□□□□ 0.88
PHF1-209ENST00000487667 SLC17A7Q9P2U7 560 aa20.55■□□□□ 0.88
PHF1-209ENST00000487667 STARD13Q9Y3M8 1113 aa20.55■□□□□ 0.88
PHF1-209ENST00000487667 OR51B4Q9Y5P0 310 aa20.55■□□□□ 0.88
PHF1-209ENST00000487667 MROH6A6NGR9 719 aa20.55■□□□□ 0.88
PHF1-209ENST00000487667 TPP1O14773 563 aa20.55■□□□□ 0.88
PHF1-209ENST00000487667 MUSKO15146 869 aa20.55■□□□□ 0.88
PHF1-209ENST00000487667 SLC7A4O43246 635 aa20.55■□□□□ 0.88
PHF1-209ENST00000487667 SNX3O60493 162 aa20.55■□□□□ 0.88
PHF1-209ENST00000487667 ZMPSTE24O75844 475 aa20.55■□□□□ 0.88
PHF1-209ENST00000487667 MYOGP15173 224 aa20.55■□□□□ 0.88
PHF1-209ENST00000487667 TCF3P15923 654 aa20.55■□□□□ 0.88
PHF1-209ENST00000487667 FOXN2P32314 431 aa20.55■□□□□ 0.88
PHF1-209ENST00000487667 MAPK8P45983 427 aa20.55■□□□□ 0.88
PHF1-209ENST00000487667 ARF5P84085 180 aa20.55■□□□□ 0.88
PHF1-209ENST00000487667 MSLNQ13421 630 aaPredicted RBP20.55■□□□□ 0.88
PHF1-209ENST00000487667 CYTH1Q15438 398 aa20.55■□□□□ 0.88
PHF1-209ENST00000487667 CNGA3Q16281 694 aa20.55■□□□□ 0.88
PHF1-209ENST00000487667 FSTL4Q6MZW2 842 aa20.55■□□□□ 0.88
PHF1-209ENST00000487667 ESRP1Q6NXG1 681 aaKnown RBP20.55■□□□□ 0.88
PHF1-209ENST00000487667 BBS7Q8IWZ6 715 aa20.55■□□□□ 0.88
PHF1-209ENST00000487667 KIAA1958Q8N8K9 716 aa20.55■□□□□ 0.88
PHF1-209ENST00000487667 FIBINQ8TAL6 211 aa20.55■□□□□ 0.88
PHF1-209ENST00000487667 BRSK1Q8TDC3 778 aa20.55■□□□□ 0.88
PHF1-209ENST00000487667 ZNF75CPQ92670 426 aaPredicted RBP20.55■□□□□ 0.88
PHF1-209ENST00000487667 AGAP2Q99490 1192 aa20.55■□□□□ 0.88
PHF1-209ENST00000487667 MCMBPQ9BTE3 642 aa20.55■□□□□ 0.88
PHF1-209ENST00000487667 ADGRE3Q9BY15 652 aa20.55■□□□□ 0.88
PHF1-209ENST00000487667 SLC13A1Q9BZW2 595 aa20.55■□□□□ 0.88
PHF1-209ENST00000487667 TBC1D14Q9P2M4 693 aa20.55■□□□□ 0.88
PHF1-209ENST00000487667 KLF11O14901 512 aa20.54■□□□□ 0.88
PHF1-209ENST00000487667 GRM6O15303 877 aa20.54■□□□□ 0.88
PHF1-209ENST00000487667 RHOP08100 348 aa20.54■□□□□ 0.88
PHF1-209ENST00000487667 NEFHP12036 1026 aa20.54■□□□□ 0.88
PHF1-209ENST00000487667 SERPINB4P48594 390 aa20.54■□□□□ 0.88
PHF1-209ENST00000487667 ERVK-21P61565 698 aa20.54■□□□□ 0.88
PHF1-209ENST00000487667 FAM109BQ6ICB4 259 aaPredicted RBP20.54■□□□□ 0.88
PHF1-209ENST00000487667 C6orf89Q6UWU4 347 aa20.54■□□□□ 0.88
PHF1-209ENST00000487667 DCLK2Q8N568 766 aa20.54■□□□□ 0.88
PHF1-209ENST00000487667 ZNF778Q96MU6 729 aa20.54■□□□□ 0.88
PHF1-209ENST00000487667 GPR22Q99680 433 aa20.54■□□□□ 0.88
PHF1-209ENST00000487667 ELAC2Q9BQ52 826 aaKnown RBP20.54■□□□□ 0.88
PHF1-209ENST00000487667 MANSC1Q9H8J5 431 aa20.54■□□□□ 0.88
PHF1-209ENST00000487667 NOD2Q9HC29 1040 aa20.54■□□□□ 0.88
PHF1-209ENST00000487667 USP15Q9Y4E8 981 aaPredicted RBP20.54■□□□□ 0.88
PHF1-209ENST00000487667 TMCC1O94876 653 aa20.53■□□□□ 0.88
PHF1-209ENST00000487667 CRTAMO95727 393 aa20.53■□□□□ 0.88
PHF1-209ENST00000487667 SCNN1BP51168 640 aa20.53■□□□□ 0.88
PHF1-209ENST00000487667 NEPROQ6NW34 567 aa20.53■□□□□ 0.88
PHF1-209ENST00000487667 OTUD6BQ8N6M0 293 aa20.53■□□□□ 0.88
PHF1-209ENST00000487667 SH3RF2Q8TEC5 729 aa20.53■□□□□ 0.88
PHF1-209ENST00000487667 SCG3Q8WXD2 468 aaKnown RBP20.53■□□□□ 0.88
PHF1-209ENST00000487667 OTUB2Q96DC9 234 aa20.53■□□□□ 0.88
PHF1-209ENST00000487667 ALG14Q96F25 216 aa20.53■□□□□ 0.88
PHF1-209ENST00000487667 VPS39Q96JC1 886 aa20.53■□□□□ 0.88
PHF1-209ENST00000487667 TRIB3Q96RU7 358 aa20.53■□□□□ 0.88
PHF1-209ENST00000487667 IL1RAPL1Q9NZN1 696 aa20.53■□□□□ 0.88
PHF1-209ENST00000487667 DNMT3BQ9UBC3 853 aaKnown RBP20.53■□□□□ 0.88
PHF1-209ENST00000487667 ANKRD6Q9Y2G4 727 aa20.53■□□□□ 0.88
PHF1-209ENST00000487667 IL1BP01584 269 aa20.53■□□□□ 0.88
PHF1-209ENST00000487667 GLDCP23378 1020 aa20.53■□□□□ 0.88
PHF1-209ENST00000487667 CSKP41240 450 aa20.53■□□□□ 0.88
PHF1-209ENST00000487667 PLK1P53350 603 aa20.53■□□□□ 0.88
PHF1-209ENST00000487667 ACVR1Q04771 509 aa20.53■□□□□ 0.88
PHF1-209ENST00000487667 GPM6BQ13491 265 aa20.53■□□□□ 0.88
PHF1-209ENST00000487667 CCDC153Q494R4 210 aa20.53■□□□□ 0.88
PHF1-209ENST00000487667 ATG16L1Q676U5 607 aa20.53■□□□□ 0.88
PHF1-209ENST00000487667 SPATA21Q7Z572 469 aa20.53■□□□□ 0.88
PHF1-209ENST00000487667 C2CD4AQ8NCU7 369 aaPredicted RBP20.53■□□□□ 0.88
PHF1-209ENST00000487667 LMAN2LQ9H0V9 348 aa20.53■□□□□ 0.88
PHF1-209ENST00000487667 MFSD1Q9H3U5 465 aa20.53■□□□□ 0.88
PHF1-209ENST00000487667 SNX15Q9NRS6 342 aa20.53■□□□□ 0.88
PHF1-209ENST00000487667 TDP1Q9NUW8 608 aa20.53■□□□□ 0.88
PHF1-209ENST00000487667 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP20.53■□□□□ 0.883e-9■■■□□ 19.2
PHF1-209ENST00000487667 SLC17A6Q9P2U8 582 aa20.53■□□□□ 0.88
PHF1-209ENST00000487667 VPS51Q9UID3 782 aa20.53■□□□□ 0.88
PHF1-209ENST00000487667 HELZP42694 1942 aaKnown RBP20.52■□□□□ 0.88
PHF1-209ENST00000487667 EDF1O60869 148 aaKnown RBP20.52■□□□□ 0.88
PHF1-209ENST00000487667 MZF1P28698 734 aaPredicted RBP20.52■□□□□ 0.88
PHF1-209ENST00000487667 AP1S1P61966 158 aa20.52■□□□□ 0.88
PHF1-209ENST00000487667 CAMK1Q14012 370 aa20.52■□□□□ 0.88
PHF1-209ENST00000487667 PDE1CQ14123 709 aaPredicted RBP20.52■□□□□ 0.88
PHF1-209ENST00000487667 FSCBQ5H9T9 825 aa20.52■□□□□ 0.88
PHF1-209ENST00000487667 ZC3HC1Q86WB0 502 aaKnown RBP20.52■□□□□ 0.88
PHF1-209ENST00000487667 STYXQ8WUJ0 223 aa20.52■□□□□ 0.88
PHF1-209ENST00000487667 TSNARE1Q96NA8 513 aa20.52■□□□□ 0.88
PHF1-209ENST00000487667 TDRD1Q9BXT4 1180 aaKnown RBP20.52■□□□□ 0.88
PHF1-209ENST00000487667 MID2Q9UJV3 735 aa20.52■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms