RNA–Protein interactions for RNA: ENST00000487401.1

SREBF1-215, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 477 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-215ENST00000487401 PRPSAP2O60256 369 aa12.59□□□□□ -0.39
SREBF1-215ENST00000487401 OPA1O60313 960 aa12.59□□□□□ -0.39
SREBF1-215ENST00000487401 NEBLO76041 1014 aa12.59□□□□□ -0.39
SREBF1-215ENST00000487401 GIMD1P0DJR0 217 aa12.59□□□□□ -0.39
SREBF1-215ENST00000487401 MYF5P13349 255 aa12.59□□□□□ -0.39
SREBF1-215ENST00000487401 ITIH2P19823 946 aa12.59□□□□□ -0.39
SREBF1-215ENST00000487401 PAPOLAP51003 745 aaKnown RBP12.59□□□□□ -0.39
SREBF1-215ENST00000487401 PFN3P60673 137 aa12.59□□□□□ -0.39
SREBF1-215ENST00000487401 KLHL30Q0D2K2 578 aa12.59□□□□□ -0.39
SREBF1-215ENST00000487401 ELP6Q0PNE2 266 aa12.59□□□□□ -0.39
SREBF1-215ENST00000487401 GRM3Q14832 879 aa12.59□□□□□ -0.39
SREBF1-215ENST00000487401 RTP5Q14D33 572 aa12.59□□□□□ -0.39
SREBF1-215ENST00000487401 PLEKHA7Q6IQ23 1121 aa12.59□□□□□ -0.39
SREBF1-215ENST00000487401 ERAP2Q6P179 960 aa12.59□□□□□ -0.39
SREBF1-215ENST00000487401 KDM7AQ6ZMT4 941 aa12.59□□□□□ -0.39
SREBF1-215ENST00000487401 LRRC69Q6ZNQ3 347 aa12.59□□□□□ -0.39
SREBF1-215ENST00000487401 DNAAF5Q86Y56 855 aa12.59□□□□□ -0.39
SREBF1-215ENST00000487401 DCBLD1Q8N8Z6 715 aa12.59□□□□□ -0.39
SREBF1-215ENST00000487401 FAM181AQ8N9Y4 354 aa12.59□□□□□ -0.39
SREBF1-215ENST00000487401 ZNF548Q8NEK5 533 aaPredicted RBP12.59□□□□□ -0.39
SREBF1-215ENST00000487401 CENPTQ96BT3 561 aa12.59□□□□□ -0.39
SREBF1-215ENST00000487401 CELF6Q96J87 481 aaKnown RBP12.59□□□□□ -0.39
SREBF1-215ENST00000487401 EXOC2Q96KP1 924 aa12.59□□□□□ -0.39
SREBF1-215ENST00000487401 SYT11Q9BT88 431 aa12.59□□□□□ -0.39
SREBF1-215ENST00000487401 WRAP53Q9BUR4 548 aaKnown RBP12.59□□□□□ -0.39
SREBF1-215ENST00000487401 SUV39H2Q9H5I1 410 aa12.59□□□□□ -0.39
SREBF1-215ENST00000487401 HAUS4Q9H6D7 363 aa12.59□□□□□ -0.39
SREBF1-215ENST00000487401 LRRC19Q9H756 370 aa12.59□□□□□ -0.39
SREBF1-215ENST00000487401 CAAP1Q9H8G2 361 aa12.59□□□□□ -0.39
SREBF1-215ENST00000487401 AIPL1Q9NZN9 384 aa12.59□□□□□ -0.39
SREBF1-215ENST00000487401 SPASTQ9UBP0 616 aa12.59□□□□□ -0.39
SREBF1-215ENST00000487401 LHX3Q9UBR4 397 aa12.59□□□□□ -0.39
SREBF1-215ENST00000487401 DSPP15924 2871 aaKnown RBP12.59□□□□□ -0.39
SREBF1-215ENST00000487401 PKD1L2Q7Z442 2459 aa12.59□□□□□ -0.39
SREBF1-215ENST00000487401 LAMA5O15230 3695 aa12.58□□□□□ -0.4
SREBF1-215ENST00000487401 A0A087WV48 116 aa12.58□□□□□ -0.4
SREBF1-215ENST00000487401 A0A1W2PQC6 194 aa12.58□□□□□ -0.4
SREBF1-215ENST00000487401 TMEM191CA6NGB0 347 aa12.58□□□□□ -0.4
SREBF1-215ENST00000487401 J3KR12 359 aa12.58□□□□□ -0.4
SREBF1-215ENST00000487401 TOR1BO14657 336 aa12.58□□□□□ -0.4
SREBF1-215ENST00000487401 RRP8O43159 456 aaKnown RBP12.58□□□□□ -0.4
SREBF1-215ENST00000487401 PRAMEF11O60813 436 aa12.58□□□□□ -0.4
SREBF1-215ENST00000487401 PALMO75781 387 aa12.58□□□□□ -0.4
SREBF1-215ENST00000487401 PIGNO95427 931 aa12.58□□□□□ -0.4
SREBF1-215ENST00000487401 SERPINC1P01008 464 aa12.58□□□□□ -0.4
SREBF1-215ENST00000487401 GP1BAP07359 652 aa12.58□□□□□ -0.4
SREBF1-215ENST00000487401 GZMAP12544 262 aa12.58□□□□□ -0.4
SREBF1-215ENST00000487401 ZNF165P49910 485 aa12.58□□□□□ -0.4
SREBF1-215ENST00000487401 YPEL5P62699 121 aa12.58□□□□□ -0.4
SREBF1-215ENST00000487401 EIF2B5Q13144 721 aaKnown RBP12.58□□□□□ -0.4
SREBF1-215ENST00000487401 CA9Q16790 459 aa12.58□□□□□ -0.4
SREBF1-215ENST00000487401 KLHL40Q2TBA0 621 aa12.58□□□□□ -0.4
SREBF1-215ENST00000487401 TMEM52BQ4KMG9 183 aa12.58□□□□□ -0.4
SREBF1-215ENST00000487401 PPP6R3Q5H9R7 873 aaPredicted RBP12.58□□□□□ -0.4
SREBF1-215ENST00000487401 FAXCQ5TGI0 409 aa12.58□□□□□ -0.4
SREBF1-215ENST00000487401 CAVIN1Q6NZI2 390 aaKnown RBP12.58□□□□□ -0.4
SREBF1-215ENST00000487401 ZCCHC8Q6NZY4 707 aaKnown RBP12.58□□□□□ -0.4
SREBF1-215ENST00000487401 RFX8Q6ZV50 586 aa12.58□□□□□ -0.4
SREBF1-215ENST00000487401 ZNF571Q7Z3V5 609 aaPredicted RBP12.58□□□□□ -0.4
SREBF1-215ENST00000487401 PAF1Q8N7H5 531 aa12.58□□□□□ -0.4
SREBF1-215ENST00000487401 KNL1Q8NG31 2342 aa12.58□□□□□ -0.4
SREBF1-215ENST00000487401 IFI44Q8TCB0 444 aa12.58□□□□□ -0.4
SREBF1-215ENST00000487401 MAPK15Q8TD08 544 aa12.58□□□□□ -0.4
SREBF1-215ENST00000487401 GLMNQ92990 594 aa12.58□□□□□ -0.4
SREBF1-215ENST00000487401 VOPP1Q96AW1 172 aa12.58□□□□□ -0.4
SREBF1-215ENST00000487401 TRIM11Q96F44 468 aa12.58□□□□□ -0.4
SREBF1-215ENST00000487401 ZNF641Q96N77 438 aaPredicted RBP12.58□□□□□ -0.4
SREBF1-215ENST00000487401 NAP1L5Q96NT1 182 aaPredicted RBP12.58□□□□□ -0.4
SREBF1-215ENST00000487401 DEPDC7Q96QD5 511 aa12.58□□□□□ -0.4
SREBF1-215ENST00000487401 KCTD15Q96SI1 283 aaPredicted RBP12.58□□□□□ -0.4
SREBF1-215ENST00000487401 IL12RB2Q99665 862 aa12.58□□□□□ -0.4
SREBF1-215ENST00000487401 EDEM3Q9BZQ6 932 aa12.58□□□□□ -0.4
SREBF1-215ENST00000487401 SLC13A1Q9BZW2 595 aa12.58□□□□□ -0.4
SREBF1-215ENST00000487401 SLC39A8Q9C0K1 460 aa12.58□□□□□ -0.4
SREBF1-215ENST00000487401 CNOT8Q9UFF9 292 aaKnown RBP12.58□□□□□ -0.4
SREBF1-215ENST00000487401 KLF15Q9UIH9 416 aa12.58□□□□□ -0.4
SREBF1-215ENST00000487401 SCINQ9Y6U3 715 aa12.58□□□□□ -0.4
SREBF1-215ENST00000487401 CPED1A4D0V7 1026 aa12.57□□□□□ -0.4
SREBF1-215ENST00000487401 TMEM110-MUSTN1A8MSY1 372 aa12.57□□□□□ -0.4
SREBF1-215ENST00000487401 DFFAO00273 331 aa12.57□□□□□ -0.4
SREBF1-215ENST00000487401 DDX3XO00571 662 aaKnown RBP eCLIP12.57□□□□□ -0.4
SREBF1-215ENST00000487401 RIOK3O14730 519 aaKnown RBP12.57□□□□□ -0.4
SREBF1-215ENST00000487401 LZTS3O60299 673 aaPredicted RBP12.57□□□□□ -0.4
SREBF1-215ENST00000487401 MYBL1P10243 752 aa12.57□□□□□ -0.4
SREBF1-215ENST00000487401 SKILP12757 684 aa12.57□□□□□ -0.4
SREBF1-215ENST00000487401 MIPP30301 263 aa12.57□□□□□ -0.4
SREBF1-215ENST00000487401 ACTN2P35609 894 aa12.57□□□□□ -0.4
SREBF1-215ENST00000487401 IGFALSP35858 605 aa12.57□□□□□ -0.4
SREBF1-215ENST00000487401 EIF4A3P38919 411 aaKnown RBP12.57□□□□□ -0.4
SREBF1-215ENST00000487401 ABCG1P45844 678 aa12.57□□□□□ -0.4
SREBF1-215ENST00000487401 RPIAP49247 311 aa12.57□□□□□ -0.4
SREBF1-215ENST00000487401 ZNF135P52742 658 aaPredicted RBP12.57□□□□□ -0.4
SREBF1-215ENST00000487401 ADKP55263 362 aaKnown RBP12.57□□□□□ -0.4
SREBF1-215ENST00000487401 TPM4P67936 248 aa12.57□□□□□ -0.4
SREBF1-215ENST00000487401 LRRC14Q15048 493 aa12.57□□□□□ -0.4
SREBF1-215ENST00000487401 NR0B2Q15466 257 aa12.57□□□□□ -0.4
SREBF1-215ENST00000487401 CDKN3Q16667 212 aa12.57□□□□□ -0.4
SREBF1-215ENST00000487401 UGP2Q16851 508 aa12.57□□□□□ -0.4
SREBF1-215ENST00000487401 DEFB133Q30KQ1 61 aa12.57□□□□□ -0.4
SREBF1-215ENST00000487401 PRRT3Q5FWE3 981 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 139.3 ms