RNA–Protein interactions for RNA: ENST00000486665.5

HDAC6-229, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-229ENST00000486665 KRT37O76014 449 aa12.93□□□□□ -0.34
HDAC6-229ENST00000486665 SLU7O95391 586 aaKnown RBP12.93□□□□□ -0.34
HDAC6-229ENST00000486665 IGSF6O95976 241 aa12.93□□□□□ -0.34
HDAC6-229ENST00000486665 GAS8O95995 478 aa12.93□□□□□ -0.34
HDAC6-229ENST00000486665 EPHX1P07099 455 aa12.93□□□□□ -0.34
HDAC6-229ENST00000486665 HSPA9P38646 679 aaKnown RBP12.93□□□□□ -0.34
HDAC6-229ENST00000486665 CD86P42081 329 aa12.93□□□□□ -0.34
HDAC6-229ENST00000486665 CSNK1DP48730 415 aa12.93□□□□□ -0.34
HDAC6-229ENST00000486665 CCNHP51946 323 aaPredicted RBP12.93□□□□□ -0.34
HDAC6-229ENST00000486665 TERF1P54274 439 aa12.93□□□□□ -0.34
HDAC6-229ENST00000486665 SNRPD1P62314 119 aaKnown RBP12.93□□□□□ -0.34
HDAC6-229ENST00000486665 SKOR1P84550 965 aa12.93□□□□□ -0.34
HDAC6-229ENST00000486665 SLC7A5Q01650 507 aa12.93□□□□□ -0.34
HDAC6-229ENST00000486665 SPEM2Q0P670 501 aa12.93□□□□□ -0.34
HDAC6-229ENST00000486665 GPS1Q13098 491 aa12.93□□□□□ -0.34
HDAC6-229ENST00000486665 LRRC32Q14392 662 aa12.93□□□□□ -0.34
HDAC6-229ENST00000486665 PARP6Q2NL67 630 aa12.93□□□□□ -0.34
HDAC6-229ENST00000486665 ALG1LQ6GMV1 187 aa12.93□□□□□ -0.34
HDAC6-229ENST00000486665 KIAA1211LQ6NV74 962 aa12.93□□□□□ -0.34
HDAC6-229ENST00000486665 SYDE1Q6ZW31 735 aaPredicted RBP12.93□□□□□ -0.34
HDAC6-229ENST00000486665 MAATS1Q7Z4T9 603 aa12.93□□□□□ -0.34
HDAC6-229ENST00000486665 PLPP6Q8IY26 295 aa12.93□□□□□ -0.34
HDAC6-229ENST00000486665 STK40Q8N2I9 435 aa12.93□□□□□ -0.34
HDAC6-229ENST00000486665 SYNPOQ8N3V7 929 aa12.93□□□□□ -0.34
HDAC6-229ENST00000486665 RYBPQ8N488 228 aaPredicted RBP12.93□□□□□ -0.34
HDAC6-229ENST00000486665 TADA1Q96BN2 335 aa12.93□□□□□ -0.34
HDAC6-229ENST00000486665 IMP4Q96G21 291 aaKnown RBP12.93□□□□□ -0.34
HDAC6-229ENST00000486665 OXNAD1Q96HP4 312 aaPredicted RBP12.93□□□□□ -0.34
HDAC6-229ENST00000486665 RBM15Q96T37 977 aaKnown RBP eCLIP12.93□□□□□ -0.34
HDAC6-229ENST00000486665 FAM129BQ96TA1 746 aa12.93□□□□□ -0.34
HDAC6-229ENST00000486665 MLPHQ9BV36 600 aaPredicted RBP12.93□□□□□ -0.34
HDAC6-229ENST00000486665 POLR1EQ9GZS1 481 aaKnown RBP12.93□□□□□ -0.34
HDAC6-229ENST00000486665 GBA3Q9H227 469 aa12.93□□□□□ -0.34
HDAC6-229ENST00000486665 SCUBE2Q9NQ36 999 aa12.93□□□□□ -0.34
HDAC6-229ENST00000486665 UBP1Q9NZI7 540 aa12.93□□□□□ -0.34
HDAC6-229ENST00000486665 SLC8A2Q9UPR5 921 aa12.93□□□□□ -0.34
HDAC6-229ENST00000486665 MUC22E2RYF6 1773 aaPredicted RBP12.93□□□□□ -0.34
HDAC6-229ENST00000486665 CHURC1-FNTBB4DL54 471 aa12.92□□□□□ -0.34
HDAC6-229ENST00000486665 HRO43593 1189 aa12.92□□□□□ -0.34
HDAC6-229ENST00000486665 POP4O95707 220 aaKnown RBP12.92□□□□□ -0.34
HDAC6-229ENST00000486665 MT-CYBP00156 380 aaPredicted RBP12.92□□□□□ -0.34
HDAC6-229ENST00000486665 CTSLP07711 333 aa12.92□□□□□ -0.34
HDAC6-229ENST00000486665 IVDP26440 423 aa12.92□□□□□ -0.34
HDAC6-229ENST00000486665 FNTBP49356 437 aa12.92□□□□□ -0.34
HDAC6-229ENST00000486665 E2F5Q15329 346 aa12.92□□□□□ -0.34
HDAC6-229ENST00000486665 TRADDQ15628 312 aa12.92□□□□□ -0.34
HDAC6-229ENST00000486665 ARSIQ5FYB1 569 aa12.92□□□□□ -0.34
HDAC6-229ENST00000486665 SYCP2LQ5T4T6 812 aa12.92□□□□□ -0.34
HDAC6-229ENST00000486665 ITPRIPL1Q6GPH6 555 aa12.92□□□□□ -0.34
HDAC6-229ENST00000486665 SDE2Q6IQ49 451 aa12.92□□□□□ -0.34
HDAC6-229ENST00000486665 TMEM92Q6UXU6 159 aa12.92□□□□□ -0.34
HDAC6-229ENST00000486665 MAMSTRQ6ZN01 415 aa12.92□□□□□ -0.34
HDAC6-229ENST00000486665 TRMT11Q7Z4G4 463 aaKnown RBP12.92□□□□□ -0.34
HDAC6-229ENST00000486665 GDAP1L1Q96MZ0 367 aa12.92□□□□□ -0.34
HDAC6-229ENST00000486665 FAM126AQ9BYI3 521 aaPredicted RBP12.92□□□□□ -0.34
HDAC6-229ENST00000486665 TRIM31Q9BZY9 425 aa12.92□□□□□ -0.34
HDAC6-229ENST00000486665 CD248Q9HCU0 757 aa12.92□□□□□ -0.34
HDAC6-229ENST00000486665 RAB6BQ9NRW1 208 aa12.92□□□□□ -0.34
HDAC6-229ENST00000486665 SNX24Q9Y343 169 aa12.92□□□□□ -0.34
HDAC6-229ENST00000486665 WASF2Q9Y6W5 498 aa12.92□□□□□ -0.34
HDAC6-229ENST00000486665 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.91□□□□□ -0.34
HDAC6-229ENST00000486665 TCRBV7S3A2A0A539 114 aa12.91□□□□□ -0.34
HDAC6-229ENST00000486665 BHMG1C9JSJ3 638 aaPredicted RBP12.91□□□□□ -0.34
HDAC6-229ENST00000486665 K7ESF4 209 aa12.91□□□□□ -0.34
HDAC6-229ENST00000486665 SYNCRIPO60506 623 aaKnown RBP12.91□□□□□ -0.34
HDAC6-229ENST00000486665 PMPCBO75439 489 aa12.91□□□□□ -0.34
HDAC6-229ENST00000486665 PIGNO95427 931 aa12.91□□□□□ -0.34
HDAC6-229ENST00000486665 HOXB2P14652 356 aa12.91□□□□□ -0.34
HDAC6-229ENST00000486665 CES1P23141 567 aa12.91□□□□□ -0.34
HDAC6-229ENST00000486665 ACTN2P35609 894 aa12.91□□□□□ -0.34
HDAC6-229ENST00000486665 FDFT1P37268 417 aa12.91□□□□□ -0.34
HDAC6-229ENST00000486665 ADCY8P40145 1251 aa12.91□□□□□ -0.34
HDAC6-229ENST00000486665 RECQLP46063 649 aaPredicted RBP12.91□□□□□ -0.34
HDAC6-229ENST00000486665 CAMK2GQ13555 558 aaPredicted RBP12.91□□□□□ -0.34
HDAC6-229ENST00000486665 SPARCL1Q14515 664 aa12.91□□□□□ -0.34
HDAC6-229ENST00000486665 HSF5Q4G112 596 aaPredicted RBP12.91□□□□□ -0.34
HDAC6-229ENST00000486665 C8orf74Q6P047 294 aa12.91□□□□□ -0.34
HDAC6-229ENST00000486665 KDELC1Q6UW63 502 aa12.91□□□□□ -0.34
HDAC6-229ENST00000486665 C4orf22Q6V702 233 aa12.91□□□□□ -0.34
HDAC6-229ENST00000486665 PRR23BQ6ZRT6 265 aa12.91□□□□□ -0.34
HDAC6-229ENST00000486665 CAMK1DQ8IU85 385 aa12.91□□□□□ -0.34
HDAC6-229ENST00000486665 KLHDC8BQ8IXV7 354 aa12.91□□□□□ -0.34
HDAC6-229ENST00000486665 HEPHQ9BQS7 1158 aa12.91□□□□□ -0.34
HDAC6-229ENST00000486665 ERP44Q9BS26 406 aa12.91□□□□□ -0.34
HDAC6-229ENST00000486665 ZDHHC6Q9H6R6 413 aa12.91□□□□□ -0.34
HDAC6-229ENST00000486665 ASIC3Q9UHC3 531 aa12.91□□□□□ -0.34
HDAC6-229ENST00000486665 DMGDHQ9UI17 866 aaKnown RBP12.91□□□□□ -0.34
HDAC6-229ENST00000486665 CDV3Q9UKY7 258 aaKnown RBP12.91□□□□□ -0.34
HDAC6-229ENST00000486665 SARDHQ9UL12 918 aa12.91□□□□□ -0.34
HDAC6-229ENST00000486665 MMP17Q9ULZ9 603 aa12.91□□□□□ -0.34
HDAC6-229ENST00000486665 PCDHGC4Q9Y5F7 938 aa12.91□□□□□ -0.34
HDAC6-229ENST00000486665 RAI2Q9Y5P3 530 aa12.91□□□□□ -0.34
HDAC6-229ENST00000486665 USP24Q9UPU5 2620 aa12.91□□□□□ -0.34
HDAC6-229ENST00000486665 EML5Q05BV3 1969 aa12.9□□□□□ -0.34
HDAC6-229ENST00000486665 SDK1Q7Z5N4 2213 aa12.9□□□□□ -0.34
HDAC6-229ENST00000486665 ATG2BQ96BY7 2078 aa12.9□□□□□ -0.34
HDAC6-229ENST00000486665 PRR5-ARHGAP8B1AHC4 643 aa12.9□□□□□ -0.34
HDAC6-229ENST00000486665 GDF9O60383 454 aa12.9□□□□□ -0.34
HDAC6-229ENST00000486665 LEFTY1O75610 366 aa12.9□□□□□ -0.34
HDAC6-229ENST00000486665 SERPINF2P08697 491 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms