RNA–Protein interactions for RNA: ENST00000485810.1

PRPF38B-205, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 2

Gene PRPF38B, Length 1,352 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-205ENST00000485810 SMAD2Q15796 467 aaKnown RBP4.13□□□□□ -1.75
PRPF38B-205ENST00000485810 DPYSL2Q16555 572 aa4.13□□□□□ -1.75
PRPF38B-205ENST00000485810 SLC35G1Q2M3R5 365 aa4.13□□□□□ -1.75
PRPF38B-205ENST00000485810 LETM2Q2VYF4 491 aa4.13□□□□□ -1.75
PRPF38B-205ENST00000485810 SLC39A12Q504Y0 691 aa4.13□□□□□ -1.75
PRPF38B-205ENST00000485810 HSP90AA4PQ58FG1 418 aa4.13□□□□□ -1.75
PRPF38B-205ENST00000485810 FAM47CQ5HY64 1035 aa4.13□□□□□ -1.75
PRPF38B-205ENST00000485810 EMC10Q5UCC4 262 aa4.13□□□□□ -1.75
PRPF38B-205ENST00000485810 CENPPQ6IPU0 288 aa4.13□□□□□ -1.75
PRPF38B-205ENST00000485810 NEK5Q6P3R8 708 aa4.13□□□□□ -1.75
PRPF38B-205ENST00000485810 PIK3AP1Q6ZUJ8 805 aa4.13□□□□□ -1.75
PRPF38B-205ENST00000485810 CPLX4Q7Z7G2 160 aa4.13□□□□□ -1.75
PRPF38B-205ENST00000485810 TTC7BQ86TV6 843 aa4.13□□□□□ -1.75
PRPF38B-205ENST00000485810 COMTD1Q86VU5 262 aa4.13□□□□□ -1.75
PRPF38B-205ENST00000485810 RFX6Q8HWS3 928 aa4.13□□□□□ -1.75
PRPF38B-205ENST00000485810 LIX1LQ8IVB5 337 aa4.13□□□□□ -1.75
PRPF38B-205ENST00000485810 DENND6AQ8IWF6 608 aa4.13□□□□□ -1.75
PRPF38B-205ENST00000485810 CDH26Q8IXH8 852 aa4.13□□□□□ -1.75
PRPF38B-205ENST00000485810 MMGT1Q8N4V1 131 aa4.13□□□□□ -1.75
PRPF38B-205ENST00000485810 NOA1Q8NC60 698 aaKnown RBP4.13□□□□□ -1.75
PRPF38B-205ENST00000485810 CLRN3Q8NCR9 226 aa4.13□□□□□ -1.75
PRPF38B-205ENST00000485810 LILRB4Q8NHJ6 448 aa4.13□□□□□ -1.75
PRPF38B-205ENST00000485810 SLC26A7Q8TE54 656 aa4.13□□□□□ -1.75
PRPF38B-205ENST00000485810 CREB3L4Q8TEY5 395 aa4.13□□□□□ -1.75
PRPF38B-205ENST00000485810 AUTS2Q8WXX7 1259 aa4.13□□□□□ -1.75
PRPF38B-205ENST00000485810 HERVK_113Q902F9 699 aa4.13□□□□□ -1.75
PRPF38B-205ENST00000485810 P2RX5Q93086 422 aa4.13□□□□□ -1.75
PRPF38B-205ENST00000485810 FBXW5Q969U6 566 aa4.13□□□□□ -1.75
PRPF38B-205ENST00000485810 MUL1Q969V5 352 aa4.13□□□□□ -1.75
PRPF38B-205ENST00000485810 ZNF566Q969W8 418 aa4.13□□□□□ -1.75
PRPF38B-205ENST00000485810 EFHD2Q96C19 240 aaPredicted RBP4.13□□□□□ -1.75
PRPF38B-205ENST00000485810 C19orf60Q96EN9 201 aa4.13□□□□□ -1.75
PRPF38B-205ENST00000485810 TTC25Q96NG3 672 aa4.13□□□□□ -1.75
PRPF38B-205ENST00000485810 CHP1Q99653 195 aa4.13□□□□□ -1.75
PRPF38B-205ENST00000485810 COQ7Q99807 217 aa4.13□□□□□ -1.75
PRPF38B-205ENST00000485810 SH3GL2Q99962 352 aa4.13□□□□□ -1.75
PRPF38B-205ENST00000485810 FAM118BQ9BPY3 351 aa4.13□□□□□ -1.75
PRPF38B-205ENST00000485810 TRIM9Q9C026 710 aa4.13□□□□□ -1.75
PRPF38B-205ENST00000485810 MTMR12Q9C0I1 747 aa4.13□□□□□ -1.75
PRPF38B-205ENST00000485810 REXO4Q9GZR2 422 aaKnown RBP4.13□□□□□ -1.75
PRPF38B-205ENST00000485810 XRN2Q9H0D6 950 aaKnown RBP eCLIP4.13□□□□□ -1.75
PRPF38B-205ENST00000485810 CARD9Q9H257 536 aa4.13□□□□□ -1.75
PRPF38B-205ENST00000485810 VPS16Q9H269 839 aa4.13□□□□□ -1.75
PRPF38B-205ENST00000485810 EPC1Q9H2F5 836 aa4.13□□□□□ -1.75
PRPF38B-205ENST00000485810 BLZF1Q9H2G9 400 aa4.13□□□□□ -1.75
PRPF38B-205ENST00000485810 SERHL2Q9H4I8 314 aa4.13□□□□□ -1.75
PRPF38B-205ENST00000485810 STN1Q9H668 368 aaKnown RBP4.13□□□□□ -1.75
PRPF38B-205ENST00000485810 MMRN2Q9H8L6 949 aa4.13□□□□□ -1.75
PRPF38B-205ENST00000485810 PSTPIP2Q9H939 334 aa4.13□□□□□ -1.75
PRPF38B-205ENST00000485810 ZNF287Q9HBT7 754 aa4.13□□□□□ -1.75
PRPF38B-205ENST00000485810 BARX1Q9HBU1 254 aaPredicted RBP4.13□□□□□ -1.75
PRPF38B-205ENST00000485810 ERVK-5Q9HDB9 667 aa4.13□□□□□ -1.75
PRPF38B-205ENST00000485810 PNPLA8Q9NP80 782 aa4.13□□□□□ -1.75
PRPF38B-205ENST00000485810 OBP2BQ9NPH6 170 aa4.13□□□□□ -1.75
PRPF38B-205ENST00000485810 LZTFL1Q9NQ48 299 aa4.13□□□□□ -1.75
PRPF38B-205ENST00000485810 RPRD1BQ9NQG5 326 aaKnown RBP4.13□□□□□ -1.75
PRPF38B-205ENST00000485810 THG1LQ9NWX6 298 aaKnown RBP4.13□□□□□ -1.75
PRPF38B-205ENST00000485810 TAB2Q9NYJ8 693 aa4.13□□□□□ -1.75
PRPF38B-205ENST00000485810 SAMD15Q9P1V8 674 aa4.13□□□□□ -1.75
PRPF38B-205ENST00000485810 MAD2L2Q9UI95 211 aa4.13□□□□□ -1.75
PRPF38B-205ENST00000485810 PSME2Q9UL46 239 aa4.13□□□□□ -1.75
PRPF38B-205ENST00000485810 ZMYND8Q9ULU4 1186 aaPredicted RBP4.13□□□□□ -1.75
PRPF38B-205ENST00000485810 PCDHA6Q9UN73 950 aa4.13□□□□□ -1.75
PRPF38B-205ENST00000485810 PIN4Q9Y237 131 aaKnown RBP4.13□□□□□ -1.75
PRPF38B-205ENST00000485810 STK38LQ9Y2H1 464 aa4.13□□□□□ -1.75
PRPF38B-205ENST00000485810 GMEB1Q9Y692 573 aa4.13□□□□□ -1.75
PRPF38B-205ENST00000485810 SAR1BQ9Y6B6 198 aa4.13□□□□□ -1.75
PRPF38B-205ENST00000485810 NRAPQ86VF7 1730 aa4.13□□□□□ -1.75
PRPF38B-205ENST00000485810 PLIN4Q96Q06 1357 aa4.12□□□□□ -1.75
PRPF38B-205ENST00000485810 A0A0U1RQJ8 604 aa4.12□□□□□ -1.75
PRPF38B-205ENST00000485810 TCRBV16S1A1N1A0A5B0 115 aa4.12□□□□□ -1.75
PRPF38B-205ENST00000485810 ZSCAN5CA6NGD5 496 aaPredicted RBP4.12□□□□□ -1.75
PRPF38B-205ENST00000485810 OR6C65A6NJZ3 312 aa4.12□□□□□ -1.75
PRPF38B-205ENST00000485810 CAPN14A8MX76 684 aa4.12□□□□□ -1.75
PRPF38B-205ENST00000485810 E7EVH7 732 aa4.12□□□□□ -1.75
PRPF38B-205ENST00000485810 STX16-NPEPL1H3BU86 382 aa4.12□□□□□ -1.75
PRPF38B-205ENST00000485810 NDUFS8O00217 210 aa4.12□□□□□ -1.75
PRPF38B-205ENST00000485810 O00370 1275 aa4.12□□□□□ -1.75
PRPF38B-205ENST00000485810 SYT5O00445 386 aa4.12□□□□□ -1.75
PRPF38B-205ENST00000485810 E2F3O00716 465 aa4.12□□□□□ -1.75
PRPF38B-205ENST00000485810 AQP7O14520 342 aa4.12□□□□□ -1.75
PRPF38B-205ENST00000485810 APOL1O14791 398 aa4.12□□□□□ -1.75
PRPF38B-205ENST00000485810 TTI1O43156 1089 aa4.12□□□□□ -1.75
PRPF38B-205ENST00000485810 CYTH3O43739 400 aa4.12□□□□□ -1.75
PRPF38B-205ENST00000485810 SLC25A17O43808 307 aa4.12□□□□□ -1.75
PRPF38B-205ENST00000485810 SHOX2O60902 331 aaPredicted RBP4.12□□□□□ -1.75
PRPF38B-205ENST00000485810 KCNJ13O60928 360 aa4.12□□□□□ -1.75
PRPF38B-205ENST00000485810 POP4O95707 220 aaKnown RBP4.12□□□□□ -1.75
PRPF38B-205ENST00000485810 GGPS1O95749 300 aa4.12□□□□□ -1.75
PRPF38B-205ENST00000485810 KNG1P01042 644 aa4.12□□□□□ -1.75
PRPF38B-205ENST00000485810 ZNF888P0CJ79 500 aaPredicted RBP4.12□□□□□ -1.75
PRPF38B-205ENST00000485810 ZBTB48P10074 688 aaPredicted RBP4.12□□□□□ -1.75
PRPF38B-205ENST00000485810 MYF5P13349 255 aa4.12□□□□□ -1.75
PRPF38B-205ENST00000485810 PTPN1P18031 435 aaKnown RBP4.12□□□□□ -1.75
PRPF38B-205ENST00000485810 ACAT1P24752 427 aaKnown RBP4.12□□□□□ -1.75
PRPF38B-205ENST00000485810 NFKBIAP25963 317 aa4.12□□□□□ -1.75
PRPF38B-205ENST00000485810 HTR1BP28222 390 aa4.12□□□□□ -1.75
PRPF38B-205ENST00000485810 CASP1P29466 404 aa4.12□□□□□ -1.75
PRPF38B-205ENST00000485810 ADSLP30566 484 aaPredicted RBP4.12□□□□□ -1.75
PRPF38B-205ENST00000485810 MCM7P33993 719 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms