RNA–Protein interactions for RNA: ENST00000485479.5

APTX-227, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,986 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-227ENST00000485479 PDHA1P08559 390 aa12□□□□□ -0.49
APTX-227ENST00000485479 ADRB3P13945 408 aa12□□□□□ -0.49
APTX-227ENST00000485479 ITPKAP23677 461 aa12□□□□□ -0.49
APTX-227ENST00000485479 CD68P34810 354 aaPredicted RBP12□□□□□ -0.49
APTX-227ENST00000485479 CD86P42081 329 aa12□□□□□ -0.49
APTX-227ENST00000485479 OLIG2Q13516 323 aa12□□□□□ -0.49
APTX-227ENST00000485479 PCSK7Q16549 785 aa12□□□□□ -0.49
APTX-227ENST00000485479 LONRF2Q1L5Z9 754 aa12□□□□□ -0.49
APTX-227ENST00000485479 ZNF805Q5CZA5 627 aa12□□□□□ -0.49
APTX-227ENST00000485479 FAM46CQ5VWP2 391 aa12□□□□□ -0.49
APTX-227ENST00000485479 FBXL19Q6PCT2 694 aa12□□□□□ -0.49
APTX-227ENST00000485479 ZC3H14Q6PJT7 736 aaKnown RBP12□□□□□ -0.49
APTX-227ENST00000485479 LAYNQ6UX15 382 aa12□□□□□ -0.49
APTX-227ENST00000485479 ZNF567Q8N184 647 aa12□□□□□ -0.49
APTX-227ENST00000485479 FAM71DQ8N9W8 422 aa12□□□□□ -0.49
APTX-227ENST00000485479 TMIEQ8NEW7 156 aa12□□□□□ -0.49
APTX-227ENST00000485479 ARRDC2Q8TBH0 407 aa12□□□□□ -0.49
APTX-227ENST00000485479 CCDC110Q8TBZ0 833 aa12□□□□□ -0.49
APTX-227ENST00000485479 TRIM44Q96DX7 344 aaPredicted RBP12□□□□□ -0.49
APTX-227ENST00000485479 IL12RB2Q99665 862 aa12□□□□□ -0.49
APTX-227ENST00000485479 POLR1EQ9GZS1 481 aaKnown RBP12□□□□□ -0.49
APTX-227ENST00000485479 FBRSQ9HAH7 460 aa12□□□□□ -0.49
APTX-227ENST00000485479 KLHL8Q9P2G9 620 aaPredicted RBP12□□□□□ -0.49
APTX-227ENST00000485479 EFR3BQ9Y2G0 817 aa12□□□□□ -0.49
APTX-227ENST00000485479 TBC1D3DA0A087WVF3 549 aa11.99□□□□□ -0.49
APTX-227ENST00000485479 TBC1D3IA0A087WXS9 549 aa11.99□□□□□ -0.49
APTX-227ENST00000485479 TBC1D3EA0A087X179 549 aa11.99□□□□□ -0.49
APTX-227ENST00000485479 TBC1D3KA0A087X1G2 549 aa11.99□□□□□ -0.49
APTX-227ENST00000485479 TBC1D3FA6NER0 549 aaPredicted RBP11.99□□□□□ -0.49
APTX-227ENST00000485479 TBC1D3LB9A6J9 549 aa11.99□□□□□ -0.49
APTX-227ENST00000485479 SPINT1O43278 529 aa11.99□□□□□ -0.49
APTX-227ENST00000485479 MMP2P08253 660 aa11.99□□□□□ -0.49
APTX-227ENST00000485479 TBC1D3HP0C7X1 549 aa11.99□□□□□ -0.49
APTX-227ENST00000485479 ETS1P14921 441 aa11.99□□□□□ -0.49
APTX-227ENST00000485479 NFKB1P19838 968 aa11.99□□□□□ -0.49
APTX-227ENST00000485479 ITGB7P26010 798 aa11.99□□□□□ -0.49
APTX-227ENST00000485479 KCNJ1P48048 391 aa11.99□□□□□ -0.49
APTX-227ENST00000485479 IFI35P80217 286 aaPredicted RBP11.99□□□□□ -0.49
APTX-227ENST00000485479 CREB5Q02930 508 aa11.99□□□□□ -0.49
APTX-227ENST00000485479 BCL2L1Q07817 233 aa11.99□□□□□ -0.49
APTX-227ENST00000485479 FAXCQ5TGI0 409 aa11.99□□□□□ -0.49
APTX-227ENST00000485479 SEL1L3Q68CR1 1132 aa11.99□□□□□ -0.49
APTX-227ENST00000485479 PMS2CLQ68D20 193 aa11.99□□□□□ -0.49
APTX-227ENST00000485479 TBC1D3GQ6DHY5 549 aa11.99□□□□□ -0.49
APTX-227ENST00000485479 TBC1D3CQ6IPX1 549 aa11.99□□□□□ -0.49
APTX-227ENST00000485479 ERN2Q76MJ5 926 aaKnown RBP11.99□□□□□ -0.49
APTX-227ENST00000485479 TTC7BQ86TV6 843 aa11.99□□□□□ -0.49
APTX-227ENST00000485479 METTL3Q86U44 580 aaKnown RBP11.99□□□□□ -0.49
APTX-227ENST00000485479 LRRC49Q8IUZ0 686 aa11.99□□□□□ -0.49
APTX-227ENST00000485479 TBC1D3Q8IZP1 549 aaPredicted RBP11.99□□□□□ -0.49
APTX-227ENST00000485479 BBS5Q8N3I7 341 aa11.99□□□□□ -0.49
APTX-227ENST00000485479 DCLK2Q8N568 766 aa11.99□□□□□ -0.49
APTX-227ENST00000485479 GLIS1Q8NBF1 620 aa11.99□□□□□ -0.49
APTX-227ENST00000485479 NUDCD1Q96RS6 583 aa11.99□□□□□ -0.49
APTX-227ENST00000485479 SUV39H2Q9H5I1 410 aa11.99□□□□□ -0.49
APTX-227ENST00000485479 EBF2Q9HAK2 575 aa11.99□□□□□ -0.49
APTX-227ENST00000485479 FSCN3Q9NQT6 498 aa11.99□□□□□ -0.49
APTX-227ENST00000485479 TMEM74BQ9NUR3 256 aa11.99□□□□□ -0.49
APTX-227ENST00000485479 SNX12Q9UMY4 172 aa11.99□□□□□ -0.49
APTX-227ENST00000485479 CHKBQ9Y259 395 aa11.99□□□□□ -0.49
APTX-227ENST00000485479 NCKAP1Q9Y2A7 1128 aa11.99□□□□□ -0.49
APTX-227ENST00000485479 PCDHB9Q9Y5E1 797 aa11.99□□□□□ -0.49
APTX-227ENST00000485479 ZFHX2Q9C0A1 2572 aaPredicted RBP11.99□□□□□ -0.49
APTX-227ENST00000485479 PLXNA2O75051 1894 aa11.99□□□□□ -0.49
APTX-227ENST00000485479 CXorf51AA0A1B0GTR3 108 aa11.99□□□□□ -0.49
APTX-227ENST00000485479 TRAFD1O14545 582 aaPredicted RBP11.99□□□□□ -0.49
APTX-227ENST00000485479 CTPS1P17812 591 aa11.99□□□□□ -0.49
APTX-227ENST00000485479 NBL1P41271 181 aa11.99□□□□□ -0.49
APTX-227ENST00000485479 NEK3P51956 506 aa11.99□□□□□ -0.49
APTX-227ENST00000485479 TERF1P54274 439 aa11.99□□□□□ -0.49
APTX-227ENST00000485479 ZBTB16Q05516 673 aa11.99□□□□□ -0.49
APTX-227ENST00000485479 RAD51Q06609 339 aa11.99□□□□□ -0.49
APTX-227ENST00000485479 ZNF33AQ06730 810 aa11.99□□□□□ -0.49
APTX-227ENST00000485479 TEX44Q53QW1 395 aa11.99□□□□□ -0.49
APTX-227ENST00000485479 CFAP58Q5T655 872 aa11.99□□□□□ -0.49
APTX-227ENST00000485479 SYT10Q6XYQ8 523 aa11.99□□□□□ -0.49
APTX-227ENST00000485479 PID1Q7Z2X4 250 aa11.99□□□□□ -0.49
APTX-227ENST00000485479 SUMF1Q8NBK3 374 aa11.99□□□□□ -0.49
APTX-227ENST00000485479 PPP1R16AQ96I34 528 aa11.99□□□□□ -0.49
APTX-227ENST00000485479 WRAP53Q9BUR4 548 aaKnown RBP11.99□□□□□ -0.49
APTX-227ENST00000485479 MIR1-1HGQ9H1L0 117 aa11.99□□□□□ -0.49
APTX-227ENST00000485479 EPC1Q9H2F5 836 aa11.99□□□□□ -0.49
APTX-227ENST00000485479 ATP13A3Q9H7F0 1226 aa11.99□□□□□ -0.49
APTX-227ENST00000485479 FZD3Q9NPG1 666 aa11.99□□□□□ -0.49
APTX-227ENST00000485479 CA5BQ9Y2D0 317 aa11.99□□□□□ -0.49
APTX-227ENST00000485479 ATP8A1Q9Y2Q0 1164 aa11.99□□□□□ -0.49
APTX-227ENST00000485479 PATE3B3GLJ2 98 aa11.98□□□□□ -0.49
APTX-227ENST00000485479 PLRG1O43660 514 aaKnown RBP11.98□□□□□ -0.49
APTX-227ENST00000485479 LIASO43766 372 aa11.98□□□□□ -0.49
APTX-227ENST00000485479 PCDH8O95206 1070 aa11.98□□□□□ -0.49
APTX-227ENST00000485479 IGLV3-19P01714 112 aa11.98□□□□□ -0.49
APTX-227ENST00000485479 ALPIP09923 528 aa11.98□□□□□ -0.49
APTX-227ENST00000485479 PRLRP16471 622 aa11.98□□□□□ -0.49
APTX-227ENST00000485479 SERPINA4P29622 427 aa11.98□□□□□ -0.49
APTX-227ENST00000485479 NSUN2Q08J23 767 aaKnown RBP eCLIP11.98□□□□□ -0.49
APTX-227ENST00000485479 GALNT3Q14435 633 aa11.98□□□□□ -0.49
APTX-227ENST00000485479 TCEAL6Q6IPX3 200 aa11.98□□□□□ -0.49
APTX-227ENST00000485479 USP30Q70CQ3 517 aa11.98□□□□□ -0.49
APTX-227ENST00000485479 BZW1Q7L1Q6 419 aaKnown RBP11.98□□□□□ -0.49
APTX-227ENST00000485479 ASCL5Q7RTU5 278 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms