RNA–Protein interactions for RNA: ENST00000484305.1

HDAC1-209, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-209ENST00000484305 TIMP2P16035 220 aa13.05□□□□□ -0.32
HDAC1-209ENST00000484305 IL4RP24394 825 aa13.05□□□□□ -0.32
HDAC1-209ENST00000484305 GRK6P43250 576 aa13.05□□□□□ -0.32
HDAC1-209ENST00000484305 ARRB1P49407 418 aaPredicted RBP13.05□□□□□ -0.32
HDAC1-209ENST00000484305 CDH6P55285 790 aa13.05□□□□□ -0.32
HDAC1-209ENST00000484305 IL10RBQ08334 325 aa13.05□□□□□ -0.32
HDAC1-209ENST00000484305 BNIP3Q12983 259 aa13.05□□□□□ -0.32
HDAC1-209ENST00000484305 MMRN1Q13201 1228 aa13.05□□□□□ -0.32
HDAC1-209ENST00000484305 KRT81Q14533 505 aa13.05□□□□□ -0.32
HDAC1-209ENST00000484305 HADHQ16836 314 aaKnown RBP13.05□□□□□ -0.32
HDAC1-209ENST00000484305 SARM1Q6SZW1 724 aa13.05□□□□□ -0.32
HDAC1-209ENST00000484305 TMCO3Q6UWJ1 677 aa13.05□□□□□ -0.32
HDAC1-209ENST00000484305 GCNT7Q6ZNI0 430 aa13.05□□□□□ -0.32
HDAC1-209ENST00000484305 ABI3BPQ7Z7G0 1075 aa13.05□□□□□ -0.32
HDAC1-209ENST00000484305 CAMK1DQ8IU85 385 aa13.05□□□□□ -0.32
HDAC1-209ENST00000484305 OR13H1Q8NG92 308 aa13.05□□□□□ -0.32
HDAC1-209ENST00000484305 FAM71BQ8TC56 605 aa13.05□□□□□ -0.32
HDAC1-209ENST00000484305 SAP25Q8TEE9 199 aa13.05□□□□□ -0.32
HDAC1-209ENST00000484305 BMFQ96LC9 184 aa13.05□□□□□ -0.32
HDAC1-209ENST00000484305 CCDC42Q96M95 316 aa13.05□□□□□ -0.32
HDAC1-209ENST00000484305 CDC6Q99741 560 aa13.05□□□□□ -0.32
HDAC1-209ENST00000484305 C1QTNF2Q9BXJ5 285 aa13.05□□□□□ -0.32
HDAC1-209ENST00000484305 TRIM5Q9C035 493 aa13.05□□□□□ -0.32
HDAC1-209ENST00000484305 NHEJ1Q9H9Q4 299 aaPredicted RBP13.05□□□□□ -0.32
HDAC1-209ENST00000484305 UVRAGQ9P2Y5 699 aa13.05□□□□□ -0.32
HDAC1-209ENST00000484305 DKK3Q9UBP4 350 aa13.05□□□□□ -0.32
HDAC1-209ENST00000484305 SPEGQ15772 3267 aa13.05□□□□□ -0.32
HDAC1-209ENST00000484305 PTPRBP23467 1997 aa13.05□□□□□ -0.32
HDAC1-209ENST00000484305 CEP295Q9C0D2 2601 aa13.05□□□□□ -0.32
HDAC1-209ENST00000484305 COL5A1P20908 1838 aaPredicted RBP13.04□□□□□ -0.32
HDAC1-209ENST00000484305 POM121BA6NF01 834 aa13.04□□□□□ -0.32
HDAC1-209ENST00000484305 AKR1B15C9JRZ8 316 aaPredicted RBP13.04□□□□□ -0.32
HDAC1-209ENST00000484305 MUSKO15146 869 aa13.04□□□□□ -0.32
HDAC1-209ENST00000484305 MMP20O60882 483 aa13.04□□□□□ -0.32
HDAC1-209ENST00000484305 ITGAVP06756 1048 aa13.04□□□□□ -0.32
HDAC1-209ENST00000484305 ATXN1LP0C7T5 689 aaKnown RBP13.04□□□□□ -0.32
HDAC1-209ENST00000484305 EPHA8P29322 1005 aaPredicted RBP13.04□□□□□ -0.32
HDAC1-209ENST00000484305 GJC1P36383 396 aa13.04□□□□□ -0.32
HDAC1-209ENST00000484305 RXRGP48443 463 aa13.04□□□□□ -0.32
HDAC1-209ENST00000484305 CSNK1DP48730 415 aa13.04□□□□□ -0.32
HDAC1-209ENST00000484305 ARSEP51690 589 aa13.04□□□□□ -0.32
HDAC1-209ENST00000484305 TAS2R40P59535 323 aa13.04□□□□□ -0.32
HDAC1-209ENST00000484305 SLC10A7Q0GE19 358 aa13.04□□□□□ -0.32
HDAC1-209ENST00000484305 SGCGQ13326 291 aa13.04□□□□□ -0.32
HDAC1-209ENST00000484305 SRLQ86TD4 932 aa13.04□□□□□ -0.32
HDAC1-209ENST00000484305 CNGA4Q8IV77 575 aa13.04□□□□□ -0.32
HDAC1-209ENST00000484305 SLC22A18ASQ8N1D0 253 aa13.04□□□□□ -0.32
HDAC1-209ENST00000484305 CHCHD4Q8N4Q1 142 aa13.04□□□□□ -0.32
HDAC1-209ENST00000484305 SLC35G2Q8TBE7 412 aa13.04□□□□□ -0.32
HDAC1-209ENST00000484305 NSMCE3Q96MG7 304 aa13.04□□□□□ -0.32
HDAC1-209ENST00000484305 KLF6Q99612 283 aaPredicted RBP13.04□□□□□ -0.32
HDAC1-209ENST00000484305 CINPQ9BW66 212 aaPredicted RBP13.04□□□□□ -0.32
HDAC1-209ENST00000484305 CALN1Q9BXU9 219 aa13.04□□□□□ -0.32
HDAC1-209ENST00000484305 SUV39H2Q9H5I1 410 aa13.04□□□□□ -0.32
HDAC1-209ENST00000484305 CAAP1Q9H8G2 361 aa13.04□□□□□ -0.32
HDAC1-209ENST00000484305 TOR4AQ9NXH8 423 aa13.04□□□□□ -0.32
HDAC1-209ENST00000484305 KLK13Q9UKR3 277 aa13.04□□□□□ -0.32
HDAC1-209ENST00000484305 HS3ST3A1Q9Y663 406 aa13.04□□□□□ -0.32
HDAC1-209ENST00000484305 MAP1BP46821 2468 aaKnown RBP13.04□□□□□ -0.32
HDAC1-209ENST00000484305 TSPAN11A1L157 253 aa13.03□□□□□ -0.32
HDAC1-209ENST00000484305 GOLGA8CPA6NN73 597 aa13.03□□□□□ -0.32
HDAC1-209ENST00000484305 A6NNZ2 444 aa13.03□□□□□ -0.32
HDAC1-209ENST00000484305 TMEM110-MUSTN1A8MSY1 372 aa13.03□□□□□ -0.32
HDAC1-209ENST00000484305 YKT6O15498 198 aa13.03□□□□□ -0.32
HDAC1-209ENST00000484305 MAFKO60675 156 aa13.03□□□□□ -0.32
HDAC1-209ENST00000484305 SDC3O75056 442 aa13.03□□□□□ -0.32
HDAC1-209ENST00000484305 TRIM16O95361 564 aa13.03□□□□□ -0.32
HDAC1-209ENST00000484305 PEX11BO96011 259 aa13.03□□□□□ -0.32
HDAC1-209ENST00000484305 NSUN2Q08J23 767 aaKnown RBP eCLIP13.03□□□□□ -0.32
HDAC1-209ENST00000484305 DPYSL3Q14195 570 aa13.03□□□□□ -0.32
HDAC1-209ENST00000484305 RFTN1Q14699 578 aaPredicted RBP13.03□□□□□ -0.32
HDAC1-209ENST00000484305 LBRQ14739 615 aaKnown RBP13.03□□□□□ -0.32
HDAC1-209ENST00000484305 GRM3Q14832 879 aa13.03□□□□□ -0.32
HDAC1-209ENST00000484305 UGP2Q16851 508 aa13.03□□□□□ -0.32
HDAC1-209ENST00000484305 TMCO4Q5TGY1 634 aa13.03□□□□□ -0.32
HDAC1-209ENST00000484305 KDM7AQ6ZMT4 941 aa13.03□□□□□ -0.32
HDAC1-209ENST00000484305 Q6ZSR6 202 aa13.03□□□□□ -0.32
HDAC1-209ENST00000484305 KANSL1Q7Z3B3 1105 aa13.03□□□□□ -0.32
HDAC1-209ENST00000484305 PTAR1Q7Z6K3 402 aaPredicted RBP13.03□□□□□ -0.32
HDAC1-209ENST00000484305 RAB44Q7Z6P3 723 aaPredicted RBP13.03□□□□□ -0.32
HDAC1-209ENST00000484305 ZSCAN30Q86W11 494 aa13.03□□□□□ -0.32
HDAC1-209ENST00000484305 ZSWIM9Q86XI8 627 aa13.03□□□□□ -0.32
HDAC1-209ENST00000484305 OXR1Q8N573 874 aa13.03□□□□□ -0.32
HDAC1-209ENST00000484305 KCTD6Q8NC69 237 aa13.03□□□□□ -0.32
HDAC1-209ENST00000484305 HCAR2Q8TDS4 363 aa13.03□□□□□ -0.32
HDAC1-209ENST00000484305 ZNF641Q96N77 438 aaPredicted RBP13.03□□□□□ -0.32
HDAC1-209ENST00000484305 LENG8Q96PV6 779 aaPredicted RBP13.03□□□□□ -0.32
HDAC1-209ENST00000484305 PSKH2Q96QS6 385 aa13.03□□□□□ -0.32
HDAC1-209ENST00000484305 TUBGCP5Q96RT8 1024 aa13.03□□□□□ -0.32
HDAC1-209ENST00000484305 WRAP53Q9BUR4 548 aaKnown RBP13.03□□□□□ -0.32
HDAC1-209ENST00000484305 KLHL11Q9NVR0 708 aa13.03□□□□□ -0.32
HDAC1-209ENST00000484305 RCOR3Q9P2K3 495 aaPredicted RBP13.03□□□□□ -0.32
HDAC1-209ENST00000484305 APOBEC2Q9Y235 224 aaKnown RBP13.03□□□□□ -0.32
HDAC1-209ENST00000484305 PLXNB3Q9ULL4 1909 aa13.03□□□□□ -0.32
HDAC1-209ENST00000484305 AKAP13Q12802 2813 aa13.02□□□□□ -0.33
HDAC1-209ENST00000484305 TTC24A2A3L6 582 aaPredicted RBP13.02□□□□□ -0.33
HDAC1-209ENST00000484305 TNFSF14O43557 240 aa13.02□□□□□ -0.33
HDAC1-209ENST00000484305 SERPINB6P35237 376 aa13.02□□□□□ -0.33
HDAC1-209ENST00000484305 SCNN1BP51168 640 aa13.02□□□□□ -0.33
HDAC1-209ENST00000484305 MESDQ14696 234 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms