RNA–Protein interactions for RNA: ENST00000484112.5

CPSF4-213, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-213ENST00000484112 TP53BP1Q12888 1972 aaPredicted RBP10.17□□□□□ -0.78
CPSF4-213ENST00000484112 MYLKQ15746 1914 aa10.16□□□□□ -0.78
CPSF4-213ENST00000484112 A0A0A6YYK5 440 aaPredicted RBP10.16□□□□□ -0.78
CPSF4-213ENST00000484112 C10orf142B7Z368 130 aa10.16□□□□□ -0.78
CPSF4-213ENST00000484112 PRAMEF26H0Y7S4 382 aa10.16□□□□□ -0.78
CPSF4-213ENST00000484112 H3BRJ5 948 aa10.16□□□□□ -0.78
CPSF4-213ENST00000484112 J3QKU1 62 aa10.16□□□□□ -0.78
CPSF4-213ENST00000484112 EEF2KO00418 725 aaKnown RBP10.16□□□□□ -0.78
CPSF4-213ENST00000484112 MCF2LO15068 1137 aa10.16□□□□□ -0.78
CPSF4-213ENST00000484112 SLC31A1O15431 190 aa10.16□□□□□ -0.78
CPSF4-213ENST00000484112 PLRG1O43660 514 aaKnown RBP10.16□□□□□ -0.78
CPSF4-213ENST00000484112 CREB3O43889 395 aa10.16□□□□□ -0.78
CPSF4-213ENST00000484112 KRT7P08729 469 aa10.16□□□□□ -0.78
CPSF4-213ENST00000484112 THEGLP0DJG4 465 aa10.16□□□□□ -0.78
CPSF4-213ENST00000484112 MYF5P13349 255 aa10.16□□□□□ -0.78
CPSF4-213ENST00000484112 ARL4AP40617 200 aa10.16□□□□□ -0.78
CPSF4-213ENST00000484112 SLC1A1P43005 524 aa10.16□□□□□ -0.78
CPSF4-213ENST00000484112 PCBP4P57723 403 aaKnown RBP10.16□□□□□ -0.78
CPSF4-213ENST00000484112 GABREP78334 506 aa10.16□□□□□ -0.78
CPSF4-213ENST00000484112 CCDC15Q0P6D6 951 aa10.16□□□□□ -0.78
CPSF4-213ENST00000484112 CNTN1Q12860 1018 aa10.16□□□□□ -0.78
CPSF4-213ENST00000484112 OVGP1Q12889 678 aa10.16□□□□□ -0.78
CPSF4-213ENST00000484112 ZNF211Q13398 564 aaPredicted RBP10.16□□□□□ -0.78
CPSF4-213ENST00000484112 POLD3Q15054 466 aaPredicted RBP10.16□□□□□ -0.78
CPSF4-213ENST00000484112 SETMARQ53H47 684 aaPredicted RBP10.16□□□□□ -0.78
CPSF4-213ENST00000484112 INO80DQ53TQ3 878 aaPredicted RBP10.16□□□□□ -0.78
CPSF4-213ENST00000484112 FAM46CQ5VWP2 391 aa10.16□□□□□ -0.78
CPSF4-213ENST00000484112 RFX8Q6ZV50 586 aa10.16□□□□□ -0.78
CPSF4-213ENST00000484112 CYP4V2Q6ZWL3 525 aaPredicted RBP10.16□□□□□ -0.78
CPSF4-213ENST00000484112 POLNQ7Z5Q5 900 aa10.16□□□□□ -0.78
CPSF4-213ENST00000484112 IQCHQ86VS3 1027 aa10.16□□□□□ -0.78
CPSF4-213ENST00000484112 VSIG1Q86XK7 387 aa10.16□□□□□ -0.78
CPSF4-213ENST00000484112 DNAAF5Q86Y56 855 aa10.16□□□□□ -0.78
CPSF4-213ENST00000484112 CACTIN-AS1Q8N1I8 211 aa10.16□□□□□ -0.78
CPSF4-213ENST00000484112 PCDH20Q8N6Y1 951 aaKnown RBP10.16□□□□□ -0.78
CPSF4-213ENST00000484112 OR52K2Q8NGK3 314 aa10.16□□□□□ -0.78
CPSF4-213ENST00000484112 FAM71BQ8TC56 605 aa10.16□□□□□ -0.78
CPSF4-213ENST00000484112 FRS2Q8WU20 508 aa10.16□□□□□ -0.78
CPSF4-213ENST00000484112 ARHGEF2Q92974 986 aaKnown RBP10.16□□□□□ -0.78
CPSF4-213ENST00000484112 ISG20Q96AZ6 181 aaKnown RBP10.16□□□□□ -0.78
CPSF4-213ENST00000484112 ARHGEF26Q96DR7 871 aa10.16□□□□□ -0.78
CPSF4-213ENST00000484112 PSMB7Q99436 277 aa10.16□□□□□ -0.78
CPSF4-213ENST00000484112 TRIM7Q9C029 511 aa10.16□□□□□ -0.78
CPSF4-213ENST00000484112 KDM4CQ9H3R0 1056 aa10.16□□□□□ -0.78
CPSF4-213ENST00000484112 DHX35Q9H5Z1 703 aaKnown RBP10.16□□□□□ -0.78
CPSF4-213ENST00000484112 CAAP1Q9H8G2 361 aa10.16□□□□□ -0.78
CPSF4-213ENST00000484112 UCKL1Q9NWZ5 548 aa10.16□□□□□ -0.78
CPSF4-213ENST00000484112 PCSK1NQ9UHG2 260 aa10.16□□□□□ -0.78
CPSF4-213ENST00000484112 DMTF1Q9Y222 760 aa10.16□□□□□ -0.78
CPSF4-213ENST00000484112 LOC400499M0QZD8 3231 aa10.16□□□□□ -0.78
CPSF4-213ENST00000484112 A0A0D9SEW6 157 aa10.15□□□□□ -0.78
CPSF4-213ENST00000484112 CAPN8A6NHC0 703 aa10.15□□□□□ -0.78
CPSF4-213ENST00000484112 ZNF487B1APH4 448 aa10.15□□□□□ -0.78
CPSF4-213ENST00000484112 C1QTNF3-AMACRE9PGA6 284 aa10.15□□□□□ -0.78
CPSF4-213ENST00000484112 PYCARD-AS1I3L0S3 204 aa10.15□□□□□ -0.78
CPSF4-213ENST00000484112 ERVH48-1M5A8F1 160 aa10.15□□□□□ -0.78
CPSF4-213ENST00000484112 KLK10O43240 276 aa10.15□□□□□ -0.78
CPSF4-213ENST00000484112 SLC7A4O43246 635 aa10.15□□□□□ -0.78
CPSF4-213ENST00000484112 DAPK3O43293 454 aa10.15□□□□□ -0.78
CPSF4-213ENST00000484112 KDELR3O43731 214 aa10.15□□□□□ -0.78
CPSF4-213ENST00000484112 RNGTTO60942 597 aaKnown RBP10.15□□□□□ -0.78
CPSF4-213ENST00000484112 USP12O75317 370 aa10.15□□□□□ -0.78
CPSF4-213ENST00000484112 ZMPSTE24O75844 475 aa10.15□□□□□ -0.78
CPSF4-213ENST00000484112 SRCP12931 536 aa10.15□□□□□ -0.78
CPSF4-213ENST00000484112 PRLRP16471 622 aa10.15□□□□□ -0.78
CPSF4-213ENST00000484112 DGKAP23743 735 aa10.15□□□□□ -0.78
CPSF4-213ENST00000484112 NUDT1P36639 197 aa10.15□□□□□ -0.78
CPSF4-213ENST00000484112 MAGEA1P43355 309 aa10.15□□□□□ -0.78
CPSF4-213ENST00000484112 SERPINH1P50454 418 aaKnown RBP10.15□□□□□ -0.78
CPSF4-213ENST00000484112 TMPRSS3P57727 454 aa10.15□□□□□ -0.78
CPSF4-213ENST00000484112 GSDMDP57764 484 aa10.15□□□□□ -0.78
CPSF4-213ENST00000484112 SLC25A11Q02978 314 aaKnown RBP10.15□□□□□ -0.78
CPSF4-213ENST00000484112 PDK2Q15119 407 aa10.15□□□□□ -0.78
CPSF4-213ENST00000484112 DLG2Q15700 870 aa10.15□□□□□ -0.78
CPSF4-213ENST00000484112 TMCO4Q5TGY1 634 aa10.15□□□□□ -0.78
CPSF4-213ENST00000484112 LRRC38Q5VT99 294 aa10.15□□□□□ -0.78
CPSF4-213ENST00000484112 AGBL4Q5VU57 503 aa10.15□□□□□ -0.78
CPSF4-213ENST00000484112 TRIM69Q86WT6 500 aa10.15□□□□□ -0.78
CPSF4-213ENST00000484112 LRRC49Q8IUZ0 686 aa10.15□□□□□ -0.78
CPSF4-213ENST00000484112 MAP7D3Q8IWC1 876 aa10.15□□□□□ -0.78
CPSF4-213ENST00000484112 PYROXD2Q8N2H3 581 aa10.15□□□□□ -0.78
CPSF4-213ENST00000484112 ATP11CQ8NB49 1132 aa10.15□□□□□ -0.78
CPSF4-213ENST00000484112 SLC35G2Q8TBE7 412 aa10.15□□□□□ -0.78
CPSF4-213ENST00000484112 ZNF578Q96N58 590 aaPredicted RBP10.15□□□□□ -0.78
CPSF4-213ENST00000484112 DEPDC7Q96QD5 511 aa10.15□□□□□ -0.78
CPSF4-213ENST00000484112 PEBP4Q96S96 227 aa10.15□□□□□ -0.78
CPSF4-213ENST00000484112 CALN1Q9BXU9 219 aa10.15□□□□□ -0.78
CPSF4-213ENST00000484112 ABCG4Q9H172 646 aa10.15□□□□□ -0.78
CPSF4-213ENST00000484112 FZD3Q9NPG1 666 aa10.15□□□□□ -0.78
CPSF4-213ENST00000484112 SPTLC3Q9NUV7 552 aa10.15□□□□□ -0.78
CPSF4-213ENST00000484112 DNAI1Q9UI46 699 aa10.15□□□□□ -0.78
CPSF4-213ENST00000484112 PPM1HQ9ULR3 514 aa10.15□□□□□ -0.78
CPSF4-213ENST00000484112 CHD5Q8TDI0 1954 aa10.15□□□□□ -0.78
CPSF4-213ENST00000484112 A0A1W2PQU0 124 aa10.14□□□□□ -0.79
CPSF4-213ENST00000484112 ARHGAP42A6NI28 874 aa10.14□□□□□ -0.79
CPSF4-213ENST00000484112 BTNL10A8MVZ5 291 aa10.14□□□□□ -0.79
CPSF4-213ENST00000484112 OPA1O60313 960 aa10.14□□□□□ -0.79
CPSF4-213ENST00000484112 CSO75390 466 aaKnown RBP10.14□□□□□ -0.79
CPSF4-213ENST00000484112 NDUFA10O95299 355 aa10.14□□□□□ -0.79
CPSF4-213ENST00000484112 PRNPP04156 253 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms