RNA–Protein interactions for RNA: ENST00000483778.5

ATG4B-221, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 3

Gene ATG4B, Length 1,103 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-221ENST00000483778 PIGNO95427 931 aa18.24■□□□□ 0.51
ATG4B-221ENST00000483778 CDK11BP21127 795 aaKnown RBP18.24■□□□□ 0.51
ATG4B-221ENST00000483778 GEMIN4P57678 1058 aaKnown RBP18.24■□□□□ 0.51
ATG4B-221ENST00000483778 CDKN3Q16667 212 aa18.24■□□□□ 0.51
ATG4B-221ENST00000483778 EFHC2Q5JST6 749 aa18.24■□□□□ 0.51
ATG4B-221ENST00000483778 GUSBP11Q6P575 273 aa18.24■□□□□ 0.51
ATG4B-221ENST00000483778 PARGQ86W56 976 aa18.24■□□□□ 0.51
ATG4B-221ENST00000483778 AOPEPQ8N6M6 819 aa18.24■□□□□ 0.51
ATG4B-221ENST00000483778 FAM174AQ8TBP5 190 aa18.24■□□□□ 0.51
ATG4B-221ENST00000483778 LMX1AQ8TE12 382 aa18.24■□□□□ 0.51
ATG4B-221ENST00000483778 TRIM7Q9C029 511 aa18.24■□□□□ 0.51
ATG4B-221ENST00000483778 MFHAS1Q9Y4C4 1052 aa18.24■□□□□ 0.51
ATG4B-221ENST00000483778 UNC13CQ8NB66 2214 aa18.23■□□□□ 0.51
ATG4B-221ENST00000483778 ARHGEF17Q96PE2 2063 aaPredicted RBP18.23■□□□□ 0.51
ATG4B-221ENST00000483778 A0A1W2PNU3 283 aaPredicted RBP18.23■□□□□ 0.51
ATG4B-221ENST00000483778 CPED1A4D0V7 1026 aa18.23■□□□□ 0.51
ATG4B-221ENST00000483778 NEMP2A6NFY4 417 aa18.23■□□□□ 0.51
ATG4B-221ENST00000483778 WASH4PA8MWX3 477 aa18.23■□□□□ 0.51
ATG4B-221ENST00000483778 TMCO5BA8MYB1 307 aa18.23■□□□□ 0.51
ATG4B-221ENST00000483778 ATMINO43313 823 aaPredicted RBP18.23■□□□□ 0.51
ATG4B-221ENST00000483778 AQP9O43315 295 aa18.23■□□□□ 0.51
ATG4B-221ENST00000483778 MPOP05164 745 aa18.23■□□□□ 0.51
ATG4B-221ENST00000483778 TGM2P21980 687 aa18.23■□□□□ 0.51
ATG4B-221ENST00000483778 ABCG1P45844 678 aa18.23■□□□□ 0.51
ATG4B-221ENST00000483778 RGRP47804 291 aa18.23■□□□□ 0.51
ATG4B-221ENST00000483778 RHOAP61586 193 aa18.23■□□□□ 0.51
ATG4B-221ENST00000483778 STX1AQ16623 288 aa18.23■□□□□ 0.51
ATG4B-221ENST00000483778 INO80DQ53TQ3 878 aaPredicted RBP18.23■□□□□ 0.51
ATG4B-221ENST00000483778 UMODL1-AS1Q8N2C9 162 aa18.23■□□□□ 0.51
ATG4B-221ENST00000483778 TP53I13Q8NBR0 393 aaPredicted RBP18.23■□□□□ 0.51
ATG4B-221ENST00000483778 IFI44Q8TCB0 444 aa18.23■□□□□ 0.51
ATG4B-221ENST00000483778 CELF6Q96J87 481 aaKnown RBP18.23■□□□□ 0.51
ATG4B-221ENST00000483778 NSMCE3Q96MG7 304 aa18.23■□□□□ 0.51
ATG4B-221ENST00000483778 GDAP1L1Q96MZ0 367 aa18.23■□□□□ 0.51
ATG4B-221ENST00000483778 PEBP4Q96S96 227 aa18.23■□□□□ 0.51
ATG4B-221ENST00000483778 OSBPL1AQ9BXW6 950 aa18.23■□□□□ 0.51
ATG4B-221ENST00000483778 CLPBQ9H078 707 aa18.23■□□□□ 0.51
ATG4B-221ENST00000483778 LRRC19Q9H756 370 aa18.23■□□□□ 0.51
ATG4B-221ENST00000483778 SMG1Q96Q15 3661 aaKnown RBP18.22■□□□□ 0.51
ATG4B-221ENST00000483778 ZSCAN5CA6NGD5 496 aaPredicted RBP18.22■□□□□ 0.51
ATG4B-221ENST00000483778 PRKCGP05129 697 aa18.22■□□□□ 0.51
ATG4B-221ENST00000483778 CELA2BP08218 269 aaPredicted RBP18.22■□□□□ 0.51
ATG4B-221ENST00000483778 YBEYP58557 167 aaPredicted RBP18.22■□□□□ 0.51
ATG4B-221ENST00000483778 CCDC173Q0VFZ6 552 aa18.22■□□□□ 0.51
ATG4B-221ENST00000483778 MAMLD1Q13495 774 aa18.22■□□□□ 0.51
ATG4B-221ENST00000483778 KLHL40Q2TBA0 621 aa18.22■□□□□ 0.51
ATG4B-221ENST00000483778 HS1BP3Q53T59 392 aa18.22■□□□□ 0.51
ATG4B-221ENST00000483778 PERM1Q5SV97 790 aa18.22■□□□□ 0.51
ATG4B-221ENST00000483778 E4F1Q66K89 784 aaPredicted RBP18.22■□□□□ 0.51
ATG4B-221ENST00000483778 KCTD16Q68DU8 428 aa18.22■□□□□ 0.51
ATG4B-221ENST00000483778 CRTC1Q6UUV9 634 aa18.22■□□□□ 0.51
ATG4B-221ENST00000483778 ZSWIM9Q86XI8 627 aa18.22■□□□□ 0.51
ATG4B-221ENST00000483778 SNIP1Q8TAD8 396 aaKnown RBP18.22■□□□□ 0.51
ATG4B-221ENST00000483778 FGF11Q92914 225 aa18.22■□□□□ 0.51
ATG4B-221ENST00000483778 FUBP1Q96AE4 644 aaKnown RBP18.22■□□□□ 0.51
ATG4B-221ENST00000483778 SLC39A8Q9C0K1 460 aa18.22■□□□□ 0.51
ATG4B-221ENST00000483778 PRORYQ9H606 182 aa18.22■□□□□ 0.51
ATG4B-221ENST00000483778 PDFQ9HBH1 243 aa18.22■□□□□ 0.51
ATG4B-221ENST00000483778 CSNK1G3Q9Y6M4 447 aa18.22■□□□□ 0.51
ATG4B-221ENST00000483778 GCN1Q92616 2671 aaKnown RBP18.22■□□□□ 0.51
ATG4B-221ENST00000483778 PMS2P1A4D2B8 440 aa18.21■□□□□ 0.51
ATG4B-221ENST00000483778 CSO75390 466 aaKnown RBP18.21■□□□□ 0.51
ATG4B-221ENST00000483778 TM7SF2O76062 418 aa18.21■□□□□ 0.51
ATG4B-221ENST00000483778 IGSF6O95976 241 aa18.21■□□□□ 0.51
ATG4B-221ENST00000483778 PRB1P04280 392 aa18.21■□□□□ 0.51
ATG4B-221ENST00000483778 ALPPL2P10696 532 aa18.21■□□□□ 0.51
ATG4B-221ENST00000483778 FERP16591 822 aa18.21■□□□□ 0.51
ATG4B-221ENST00000483778 TNFAIP3P21580 790 aa18.21■□□□□ 0.51
ATG4B-221ENST00000483778 EIF4A3P38919 411 aaKnown RBP18.21■□□□□ 0.51
ATG4B-221ENST00000483778 ADKP55263 362 aaKnown RBP18.21■□□□□ 0.51
ATG4B-221ENST00000483778 TCEA2Q15560 299 aa18.21■□□□□ 0.51
ATG4B-221ENST00000483778 WSCD2Q2TBF2 565 aa18.21■□□□□ 0.51
ATG4B-221ENST00000483778 TBC1D25Q3MII6 688 aa18.21■□□□□ 0.51
ATG4B-221ENST00000483778 TMEM52BQ4KMG9 183 aa18.21■□□□□ 0.51
ATG4B-221ENST00000483778 PRRT3Q5FWE3 981 aa18.21■□□□□ 0.51
ATG4B-221ENST00000483778 DCUN1D2Q6PH85 259 aa18.21■□□□□ 0.51
ATG4B-221ENST00000483778 CYP4V2Q6ZWL3 525 aaPredicted RBP18.21■□□□□ 0.51
ATG4B-221ENST00000483778 TP53INP2Q8IXH6 220 aa18.21■□□□□ 0.51
ATG4B-221ENST00000483778 DENND6BQ8NEG7 585 aa18.21■□□□□ 0.51
ATG4B-221ENST00000483778 EPAS1Q99814 870 aa18.21■□□□□ 0.51
ATG4B-221ENST00000483778 CPEB1Q9BZB8 566 aaKnown RBP18.21■□□□□ 0.51
ATG4B-221ENST00000483778 DKK3Q9UBP4 350 aa18.21■□□□□ 0.51
ATG4B-221ENST00000483778 PCSK1NQ9UHG2 260 aa18.21■□□□□ 0.51
ATG4B-221ENST00000483778 USP12O75317 370 aa18.2■□□□□ 0.5
ATG4B-221ENST00000483778 PAPOLAP51003 745 aaKnown RBP18.2■□□□□ 0.5
ATG4B-221ENST00000483778 TYRO3Q06418 890 aa18.2■□□□□ 0.5
ATG4B-221ENST00000483778 IRF4Q15306 451 aa18.2■□□□□ 0.5
ATG4B-221ENST00000483778 PARP15Q460N3 678 aa18.2■□□□□ 0.5
ATG4B-221ENST00000483778 ZCCHC8Q6NZY4 707 aaKnown RBP18.2■□□□□ 0.5
ATG4B-221ENST00000483778 ARHGAP36Q6ZRI8 547 aa18.2■□□□□ 0.5
ATG4B-221ENST00000483778 EFL1Q7Z2Z2 1120 aaKnown RBP18.2■□□□□ 0.5
ATG4B-221ENST00000483778 CAMK1DQ8IU85 385 aa18.2■□□□□ 0.5
ATG4B-221ENST00000483778 SLC35F3Q8IY50 421 aa18.2■□□□□ 0.5
ATG4B-221ENST00000483778 PHACTR4Q8IZ21 702 aa18.2■□□□□ 0.5
ATG4B-221ENST00000483778 ANKRD20A12PQ8NF67 263 aa18.2■□□□□ 0.5
ATG4B-221ENST00000483778 MAPK15Q8TD08 544 aa18.2■□□□□ 0.5
ATG4B-221ENST00000483778 CXorf40AQ8TE69 158 aa18.2■□□□□ 0.5
ATG4B-221ENST00000483778 CASKIN2Q8WXE0 1202 aa18.2■□□□□ 0.5
ATG4B-221ENST00000483778 TSACCQ96A04 125 aaPredicted RBP18.2■□□□□ 0.5
ATG4B-221ENST00000483778 NAF1Q96HR8 494 aaKnown RBP18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms