RNA–Protein interactions for RNA: ENST00000483122.1

VTI1A-205, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 4

Gene VTI1A, Length 2,423 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-205ENST00000483122 DHRS12A0PJE2 317 aa11.91□□□□□ -0.5
VTI1A-205ENST00000483122 EIF3FO00303 357 aaPredicted RBP11.91□□□□□ -0.5
VTI1A-205ENST00000483122 PHGDHO43175 533 aaKnown RBP11.91□□□□□ -0.5
VTI1A-205ENST00000483122 RASAL1O95294 804 aa11.91□□□□□ -0.5
VTI1A-205ENST00000483122 SNAP29O95721 258 aa11.91□□□□□ -0.5
VTI1A-205ENST00000483122 ICAM1P05362 532 aa11.91□□□□□ -0.5
VTI1A-205ENST00000483122 OXTRP30559 389 aa11.91□□□□□ -0.5
VTI1A-205ENST00000483122 CCT8P50990 548 aa11.91□□□□□ -0.5
VTI1A-205ENST00000483122 CARTPTQ16568 116 aa11.91□□□□□ -0.5
VTI1A-205ENST00000483122 PPP1R3AQ16821 1122 aa11.91□□□□□ -0.5
VTI1A-205ENST00000483122 IRAK1BP1Q5VVH5 260 aa11.91□□□□□ -0.5
VTI1A-205ENST00000483122 GTF2IRD2BQ6EKJ0 949 aa11.91□□□□□ -0.5
VTI1A-205ENST00000483122 ZNF773Q6PK81 442 aa11.91□□□□□ -0.5
VTI1A-205ENST00000483122 GADL1Q6ZQY3 521 aa11.91□□□□□ -0.5
VTI1A-205ENST00000483122 GTF2IRD2Q86UP8 949 aa11.91□□□□□ -0.5
VTI1A-205ENST00000483122 ANKRD13AQ8IZ07 590 aa11.91□□□□□ -0.5
VTI1A-205ENST00000483122 OR9I1Q8NGQ6 314 aa11.91□□□□□ -0.5
VTI1A-205ENST00000483122 GABPB2Q8TAK5 448 aaPredicted RBP11.91□□□□□ -0.5
VTI1A-205ENST00000483122 ZFP90Q8TF47 636 aa11.91□□□□□ -0.5
VTI1A-205ENST00000483122 CLIP3Q96DZ5 547 aa11.91□□□□□ -0.5
VTI1A-205ENST00000483122 SPATA13Q96N96 652 aa11.91□□□□□ -0.5
VTI1A-205ENST00000483122 LGMNQ99538 433 aa11.91□□□□□ -0.5
VTI1A-205ENST00000483122 BEGAINQ9BUH8 593 aa11.91□□□□□ -0.5
VTI1A-205ENST00000483122 C1QTNF1Q9BXJ1 281 aa11.91□□□□□ -0.5
VTI1A-205ENST00000483122 FTHL17Q9BXU8 183 aa11.91□□□□□ -0.5
VTI1A-205ENST00000483122 ELOVL4Q9GZR5 314 aa11.91□□□□□ -0.5
VTI1A-205ENST00000483122 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.91□□□□□ -0.5
VTI1A-205ENST00000483122 AKIP1Q9NQ31 210 aa11.91□□□□□ -0.5
VTI1A-205ENST00000483122 POLE4Q9NR33 117 aa11.91□□□□□ -0.5
VTI1A-205ENST00000483122 RNF181Q9P0P0 153 aa11.91□□□□□ -0.5
VTI1A-205ENST00000483122 SLC39A10Q9ULF5 831 aa11.91□□□□□ -0.5
VTI1A-205ENST00000483122 RAD54BQ9Y620 910 aa11.91□□□□□ -0.5
VTI1A-205ENST00000483122 YDJCA8MPS7 323 aa11.91□□□□□ -0.5
VTI1A-205ENST00000483122 FZD9O00144 591 aa11.91□□□□□ -0.5
VTI1A-205ENST00000483122 AXIN1O15169 862 aa11.91□□□□□ -0.5
VTI1A-205ENST00000483122 DLX3O60479 287 aa11.91□□□□□ -0.5
VTI1A-205ENST00000483122 CABYRO75952 493 aa11.91□□□□□ -0.5
VTI1A-205ENST00000483122 ALOX5P09917 674 aa11.91□□□□□ -0.5
VTI1A-205ENST00000483122 JUNBP17275 347 aaPredicted RBP11.91□□□□□ -0.5
VTI1A-205ENST00000483122 CYP3A5P20815 502 aa11.91□□□□□ -0.5
VTI1A-205ENST00000483122 FASP25445 335 aa11.91□□□□□ -0.5
VTI1A-205ENST00000483122 PSMB4P28070 264 aa11.91□□□□□ -0.5
VTI1A-205ENST00000483122 AVPR1AP37288 418 aa11.91□□□□□ -0.5
VTI1A-205ENST00000483122 PRKAA2P54646 552 aa11.91□□□□□ -0.5
VTI1A-205ENST00000483122 ARPC4P59998 168 aa11.91□□□□□ -0.5
VTI1A-205ENST00000483122 ADAM17P78536 824 aa11.91□□□□□ -0.5
VTI1A-205ENST00000483122 PTPN11Q06124 597 aaPredicted RBP11.91□□□□□ -0.5
VTI1A-205ENST00000483122 NDUFA5Q16718 116 aa11.91□□□□□ -0.5
VTI1A-205ENST00000483122 DUOXA2Q1HG44 320 aa11.91□□□□□ -0.5
VTI1A-205ENST00000483122 SPANXN3Q5MJ09 141 aa11.91□□□□□ -0.5
VTI1A-205ENST00000483122 CCNYL2Q5T2Q4 361 aa11.91□□□□□ -0.5
VTI1A-205ENST00000483122 STRIP1Q5VSL9 837 aa11.91□□□□□ -0.5
VTI1A-205ENST00000483122 CYP2U1Q7Z449 544 aa11.91□□□□□ -0.5
VTI1A-205ENST00000483122 FAM160B2Q86V87 743 aa11.91□□□□□ -0.5
VTI1A-205ENST00000483122 NAT16Q8N8M0 369 aa11.91□□□□□ -0.5
VTI1A-205ENST00000483122 ANKRD52Q8NB46 1076 aa11.91□□□□□ -0.5
VTI1A-205ENST00000483122 SPPL2BQ8TCT7 592 aa11.91□□□□□ -0.5
VTI1A-205ENST00000483122 KCTD4Q8WVF5 259 aa11.91□□□□□ -0.5
VTI1A-205ENST00000483122 CAPSLQ8WWF8 208 aa11.91□□□□□ -0.5
VTI1A-205ENST00000483122 HTR3CQ8WXA8 447 aa11.91□□□□□ -0.5
VTI1A-205ENST00000483122 ZNF670Q9BS34 389 aa11.91□□□□□ -0.5
VTI1A-205ENST00000483122 ATP13A3Q9H7F0 1226 aa11.91□□□□□ -0.5
VTI1A-205ENST00000483122 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.91□□□□□ -0.5
VTI1A-205ENST00000483122 RUVBL2Q9Y230 463 aaKnown RBP11.91□□□□□ -0.5
VTI1A-205ENST00000483122 ATP11BQ9Y2G3 1177 aa11.91□□□□□ -0.5
VTI1A-205ENST00000483122 IFT52Q9Y366 437 aa11.91□□□□□ -0.5
VTI1A-205ENST00000483122 USP12O75317 370 aa11.9□□□□□ -0.5
VTI1A-205ENST00000483122 BCAS1O75363 584 aaPredicted RBP11.9□□□□□ -0.5
VTI1A-205ENST00000483122 CAPN15O75808 1086 aa11.9□□□□□ -0.5
VTI1A-205ENST00000483122 HSPA8P11142 646 aaKnown RBP11.9□□□□□ -0.5
VTI1A-205ENST00000483122 PLA2G16P53816 162 aa11.9□□□□□ -0.5
VTI1A-205ENST00000483122 ATXN1P54253 815 aaKnown RBP11.9□□□□□ -0.5
VTI1A-205ENST00000483122 FKBP1AP62942 108 aaKnown RBP11.9□□□□□ -0.5
VTI1A-205ENST00000483122 OCA2Q04671 838 aa11.9□□□□□ -0.5
VTI1A-205ENST00000483122 C9orf131Q5VYM1 1079 aa11.9□□□□□ -0.5
VTI1A-205ENST00000483122 IQSEC1Q6DN90 963 aa11.9□□□□□ -0.5
VTI1A-205ENST00000483122 C8orf82Q6P1X6 216 aaPredicted RBP11.9□□□□□ -0.5
VTI1A-205ENST00000483122 CNSTQ6PJW8 725 aa11.9□□□□□ -0.5
VTI1A-205ENST00000483122 USP51Q70EK9 711 aa11.9□□□□□ -0.5
VTI1A-205ENST00000483122 DDIASQ8IXT1 998 aa11.9□□□□□ -0.5
VTI1A-205ENST00000483122 PARP8Q8N3A8 854 aa11.9□□□□□ -0.5
VTI1A-205ENST00000483122 OR52K1Q8NGK4 314 aa11.9□□□□□ -0.5
VTI1A-205ENST00000483122 MAGEE2Q8TD90 523 aaPredicted RBP11.9□□□□□ -0.5
VTI1A-205ENST00000483122 STON2Q8WXE9 905 aa11.9□□□□□ -0.5
VTI1A-205ENST00000483122 HDAC10Q969S8 669 aa11.9□□□□□ -0.5
VTI1A-205ENST00000483122 IL12RB2Q99665 862 aa11.9□□□□□ -0.5
VTI1A-205ENST00000483122 OMDQ99983 421 aa11.9□□□□□ -0.5
VTI1A-205ENST00000483122 CEP44Q9C0F1 390 aa11.9□□□□□ -0.5
VTI1A-205ENST00000483122 IL1RL2Q9HB29 575 aa11.9□□□□□ -0.5
VTI1A-205ENST00000483122 HMG20AQ9NP66 347 aa11.9□□□□□ -0.5
VTI1A-205ENST00000483122 SMPD3Q9NY59 655 aaPredicted RBP11.9□□□□□ -0.5
VTI1A-205ENST00000483122 GTSE1Q9NYZ3 720 aa11.9□□□□□ -0.5
VTI1A-205ENST00000483122 DTLQ9NZJ0 730 aa11.9□□□□□ -0.5
VTI1A-205ENST00000483122 MID2Q9UJV3 735 aa11.9□□□□□ -0.5
VTI1A-205ENST00000483122 TMA7Q9Y2S6 64 aaKnown RBP11.9□□□□□ -0.5
VTI1A-205ENST00000483122 NME4O00746 187 aa11.9□□□□□ -0.5
VTI1A-205ENST00000483122 NRP2O60462 931 aa11.9□□□□□ -0.5
VTI1A-205ENST00000483122 S100BP04271 92 aaPredicted RBP11.9□□□□□ -0.5
VTI1A-205ENST00000483122 EIF2S1P05198 315 aaKnown RBP11.9□□□□□ -0.5
VTI1A-205ENST00000483122 SNRPB2P08579 225 aaKnown RBP11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms