RNA–Protein interactions for RNA: ENST00000483086.1

HDLBP-239, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 620 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-239ENST00000483086 TPX2Q9ULW0 747 aaKnown RBP12.23□□□□□ -0.45
HDLBP-239ENST00000483086 HPCAL4Q9UM19 191 aa12.23□□□□□ -0.45
HDLBP-239ENST00000483086 SCINQ9Y6U3 715 aa12.23□□□□□ -0.45
HDLBP-239ENST00000483086 LY6G6EA0A0G2JKS1 128 aa12.22□□□□□ -0.45
HDLBP-239ENST00000483086 TSPAN11A1L157 253 aa12.22□□□□□ -0.45
HDLBP-239ENST00000483086 ZSCAN5CA6NGD5 496 aaPredicted RBP12.22□□□□□ -0.45
HDLBP-239ENST00000483086 GOLGA6L19H0YKK7 550 aa12.22□□□□□ -0.45
HDLBP-239ENST00000483086 TNFSF14O43557 240 aa12.22□□□□□ -0.45
HDLBP-239ENST00000483086 PRPSAP2O60256 369 aa12.22□□□□□ -0.45
HDLBP-239ENST00000483086 MMP20O60882 483 aa12.22□□□□□ -0.45
HDLBP-239ENST00000483086 TRIM16O95361 564 aa12.22□□□□□ -0.45
HDLBP-239ENST00000483086 IGSF6O95976 241 aa12.22□□□□□ -0.45
HDLBP-239ENST00000483086 ITGAVP06756 1048 aa12.22□□□□□ -0.45
HDLBP-239ENST00000483086 MYBL1P10243 752 aa12.22□□□□□ -0.45
HDLBP-239ENST00000483086 HTR7P34969 479 aa12.22□□□□□ -0.45
HDLBP-239ENST00000483086 PCK1P35558 622 aa12.22□□□□□ -0.45
HDLBP-239ENST00000483086 IGFALSP35858 605 aa12.22□□□□□ -0.45
HDLBP-239ENST00000483086 NUDT1P36639 197 aa12.22□□□□□ -0.45
HDLBP-239ENST00000483086 EIF4A3P38919 411 aaKnown RBP12.22□□□□□ -0.45
HDLBP-239ENST00000483086 ARSEP51690 589 aa12.22□□□□□ -0.45
HDLBP-239ENST00000483086 GEMIN4P57678 1058 aaKnown RBP12.22□□□□□ -0.45
HDLBP-239ENST00000483086 RPS21P63220 83 aaKnown RBP12.22□□□□□ -0.45
HDLBP-239ENST00000483086 MMRN1Q13201 1228 aa12.22□□□□□ -0.45
HDLBP-239ENST00000483086 CAMK2BQ13554 666 aa12.22□□□□□ -0.45
HDLBP-239ENST00000483086 FZD2Q14332 565 aa12.22□□□□□ -0.45
HDLBP-239ENST00000483086 IHHQ14623 411 aa12.22□□□□□ -0.45
HDLBP-239ENST00000483086 SUZ12Q15022 739 aaKnown RBP12.22□□□□□ -0.45
HDLBP-239ENST00000483086 CCDC157Q569K6 752 aa12.22□□□□□ -0.45
HDLBP-239ENST00000483086 KCTD16Q68DU8 428 aa12.22□□□□□ -0.45
HDLBP-239ENST00000483086 KIAA1161Q6NSJ0 714 aa12.22□□□□□ -0.45
HDLBP-239ENST00000483086 ALKBH5Q6P6C2 394 aaKnown RBP12.22□□□□□ -0.45
HDLBP-239ENST00000483086 DHRS13Q6UX07 377 aa12.22□□□□□ -0.45
HDLBP-239ENST00000483086 CCNI2Q6ZMN8 369 aaPredicted RBP12.22□□□□□ -0.45
HDLBP-239ENST00000483086 Q6ZSR6 202 aa12.22□□□□□ -0.45
HDLBP-239ENST00000483086 TMPRSS7Q7RTY8 843 aa12.22□□□□□ -0.45
HDLBP-239ENST00000483086 CAMK1DQ8IU85 385 aa12.22□□□□□ -0.45
HDLBP-239ENST00000483086 PGBD5Q8N414 524 aa12.22□□□□□ -0.45
HDLBP-239ENST00000483086 NIPA2Q8N8Q9 360 aa12.22□□□□□ -0.45
HDLBP-239ENST00000483086 RNF214Q8ND24 703 aa12.22□□□□□ -0.45
HDLBP-239ENST00000483086 HSPH1Q92598 858 aa12.22□□□□□ -0.45
HDLBP-239ENST00000483086 CENPTQ96BT3 561 aa12.22□□□□□ -0.45
HDLBP-239ENST00000483086 LRIG1Q96JA1 1093 aa12.22□□□□□ -0.45
HDLBP-239ENST00000483086 CNDP2Q96KP4 475 aaKnown RBP12.22□□□□□ -0.45
HDLBP-239ENST00000483086 CSPG4P5Q96PW8 444 aa12.22□□□□□ -0.45
HDLBP-239ENST00000483086 CHP1Q99653 195 aa12.22□□□□□ -0.45
HDLBP-239ENST00000483086 CDC6Q99741 560 aa12.22□□□□□ -0.45
HDLBP-239ENST00000483086 CALN1Q9BXU9 219 aa12.22□□□□□ -0.45
HDLBP-239ENST00000483086 TCEAL2Q9H3H9 227 aaPredicted RBP12.22□□□□□ -0.45
HDLBP-239ENST00000483086 PCDH18Q9HCL0 1135 aa12.22□□□□□ -0.45
HDLBP-239ENST00000483086 MBNL1Q9NR56 388 aaKnown RBP12.22□□□□□ -0.45
HDLBP-239ENST00000483086 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.22□□□□□ -0.45
HDLBP-239ENST00000483086 ANAPC7Q9UJX3 599 aa12.22□□□□□ -0.45
HDLBP-239ENST00000483086 RALYQ9UKM9 306 aaKnown RBP12.22□□□□□ -0.45
HDLBP-239ENST00000483086 COQ6Q9Y2Z9 468 aa12.22□□□□□ -0.45
HDLBP-239ENST00000483086 LUC7L2Q9Y383 392 aaKnown RBP12.22□□□□□ -0.45
HDLBP-239ENST00000483086 U3KQA8 63 aa12.22□□□□□ -0.45
HDLBP-239ENST00000483086 KIF26BQ2KJY2 2108 aa12.22□□□□□ -0.45
HDLBP-239ENST00000483086 DFFAO00273 331 aa12.21□□□□□ -0.45
HDLBP-239ENST00000483086 ENC1O14682 589 aa12.21□□□□□ -0.45
HDLBP-239ENST00000483086 CASC3O15234 703 aaKnown RBP12.21□□□□□ -0.45
HDLBP-239ENST00000483086 DFNA5O60443 496 aa12.21□□□□□ -0.45
HDLBP-239ENST00000483086 PIAS2O75928 621 aa12.21□□□□□ -0.45
HDLBP-239ENST00000483086 RNF8O76064 485 aa12.21□□□□□ -0.45
HDLBP-239ENST00000483086 GM2AP17900 193 aa12.21□□□□□ -0.45
HDLBP-239ENST00000483086 DGKAP23743 735 aa12.21□□□□□ -0.45
HDLBP-239ENST00000483086 AKT2P31751 481 aa12.21□□□□□ -0.45
HDLBP-239ENST00000483086 HCAR3P49019 387 aa12.21□□□□□ -0.45
HDLBP-239ENST00000483086 ACADVLP49748 655 aa12.21□□□□□ -0.45
HDLBP-239ENST00000483086 TAS2R40P59535 323 aa12.21□□□□□ -0.45
HDLBP-239ENST00000483086 PFN3P60673 137 aa12.21□□□□□ -0.45
HDLBP-239ENST00000483086 SLC10A7Q0GE19 358 aa12.21□□□□□ -0.45
HDLBP-239ENST00000483086 OVGP1Q12889 678 aa12.21□□□□□ -0.45
HDLBP-239ENST00000483086 EIF2B5Q13144 721 aaKnown RBP12.21□□□□□ -0.45
HDLBP-239ENST00000483086 PTPRRQ15256 657 aa12.21□□□□□ -0.45
HDLBP-239ENST00000483086 PROX2Q3B8N5 592 aa12.21□□□□□ -0.45
HDLBP-239ENST00000483086 CCDC122Q5T0U0 273 aa12.21□□□□□ -0.45
HDLBP-239ENST00000483086 KYAT3Q6YP21 454 aaKnown RBP12.21□□□□□ -0.45
HDLBP-239ENST00000483086 PTAR1Q7Z6K3 402 aaPredicted RBP12.21□□□□□ -0.45
HDLBP-239ENST00000483086 PSTKQ8IV42 348 aaKnown RBP12.21□□□□□ -0.45
HDLBP-239ENST00000483086 TP53I13Q8NBR0 393 aaPredicted RBP12.21□□□□□ -0.45
HDLBP-239ENST00000483086 LRRN4Q8WUT4 740 aa12.21□□□□□ -0.45
HDLBP-239ENST00000483086 CASKIN2Q8WXE0 1202 aa12.21□□□□□ -0.45
HDLBP-239ENST00000483086 TRIM11Q96F44 468 aa12.21□□□□□ -0.45
HDLBP-239ENST00000483086 FEM1CQ96JP0 617 aa12.21□□□□□ -0.45
HDLBP-239ENST00000483086 LENG8Q96PV6 779 aaPredicted RBP12.21□□□□□ -0.45
HDLBP-239ENST00000483086 DNAJC7Q99615 494 aa12.21□□□□□ -0.45
HDLBP-239ENST00000483086 WRAP53Q9BUR4 548 aaKnown RBP12.21□□□□□ -0.45
HDLBP-239ENST00000483086 OSBPL1AQ9BXW6 950 aa12.21□□□□□ -0.45
HDLBP-239ENST00000483086 CPEB1Q9BZB8 566 aaKnown RBP12.21□□□□□ -0.45
HDLBP-239ENST00000483086 MRPL47Q9HD33 250 aaKnown RBP12.21□□□□□ -0.45
HDLBP-239ENST00000483086 KLHL11Q9NVR0 708 aa12.21□□□□□ -0.45
HDLBP-239ENST00000483086 DKK3Q9UBP4 350 aa12.21□□□□□ -0.45
HDLBP-239ENST00000483086 FTSJ1Q9UET6 329 aa12.21□□□□□ -0.45
HDLBP-239ENST00000483086 APOBEC2Q9Y235 224 aaKnown RBP12.21□□□□□ -0.45
HDLBP-239ENST00000483086 HS3ST3A1Q9Y663 406 aa12.21□□□□□ -0.45
HDLBP-239ENST00000483086 ARHGEF17Q96PE2 2063 aaPredicted RBP12.21□□□□□ -0.45
HDLBP-239ENST00000483086 ARHGAP42A6NI28 874 aa12.2□□□□□ -0.46
HDLBP-239ENST00000483086 EIF3CLB5ME19 914 aaKnown RBP12.2□□□□□ -0.46
HDLBP-239ENST00000483086 TRAFD1O14545 582 aaPredicted RBP12.2□□□□□ -0.46
HDLBP-239ENST00000483086 TSPAN6O43657 245 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms