RNA–Protein interactions for RNA: ENST00000482310.5

HDAC1-208, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-208ENST00000482310 SEMG2Q02383 582 aa13.37□□□□□ -0.27
HDAC1-208ENST00000482310 TRAF2Q12933 501 aa13.37□□□□□ -0.27
HDAC1-208ENST00000482310 OLIG2Q13516 323 aa13.37□□□□□ -0.27
HDAC1-208ENST00000482310 IHHQ14623 411 aa13.37□□□□□ -0.27
HDAC1-208ENST00000482310 PPP1R7Q15435 360 aa13.37□□□□□ -0.27
HDAC1-208ENST00000482310 CYP1B1Q16678 543 aa13.37□□□□□ -0.27
HDAC1-208ENST00000482310 WHAMMP3Q1A5X7 153 aa13.37□□□□□ -0.27
HDAC1-208ENST00000482310 ITPRIPL1Q6GPH6 555 aa13.37□□□□□ -0.27
HDAC1-208ENST00000482310 GDPD4Q6W3E5 623 aa13.37□□□□□ -0.27
HDAC1-208ENST00000482310 HDDC3Q8N4P3 179 aa13.37□□□□□ -0.27
HDAC1-208ENST00000482310 AADATQ8N5Z0 425 aa13.37□□□□□ -0.27
HDAC1-208ENST00000482310 FAM160A2Q8N612 972 aaPredicted RBP13.37□□□□□ -0.27
HDAC1-208ENST00000482310 IPMKQ8NFU5 416 aa13.37□□□□□ -0.27
HDAC1-208ENST00000482310 ARRDC2Q8TBH0 407 aa13.37□□□□□ -0.27
HDAC1-208ENST00000482310 VAT1Q99536 393 aa13.37□□□□□ -0.27
HDAC1-208ENST00000482310 OMDQ99983 421 aa13.37□□□□□ -0.27
HDAC1-208ENST00000482310 SLC25A51Q9H1U9 297 aa13.37□□□□□ -0.27
HDAC1-208ENST00000482310 PABPC3Q9H361 631 aaKnown RBP13.37□□□□□ -0.27
HDAC1-208ENST00000482310 PRMT8Q9NR22 394 aaPredicted RBP13.37□□□□□ -0.27
HDAC1-208ENST00000482310 RNF14Q9UBS8 474 aa13.37□□□□□ -0.27
HDAC1-208ENST00000482310 SERGEFQ9UGK8 458 aa13.37□□□□□ -0.27
HDAC1-208ENST00000482310 TRHDEQ9UKU6 1024 aa13.37□□□□□ -0.27
HDAC1-208ENST00000482310 RAI2Q9Y5P3 530 aa13.37□□□□□ -0.27
HDAC1-208ENST00000482310 SCN8AQ9UQD0 1980 aa13.37□□□□□ -0.27
HDAC1-208ENST00000482310 C5orf60A6NFR6 353 aa13.36□□□□□ -0.27
HDAC1-208ENST00000482310 FAM47DPA6NHR8 397 aa13.36□□□□□ -0.27
HDAC1-208ENST00000482310 ALOX15BO15296 676 aa13.36□□□□□ -0.27
HDAC1-208ENST00000482310 OPHN1O60890 802 aa13.36□□□□□ -0.27
HDAC1-208ENST00000482310 METTL18O95568 372 aa13.36□□□□□ -0.27
HDAC1-208ENST00000482310 ECEL1O95672 775 aa13.36□□□□□ -0.27
HDAC1-208ENST00000482310 ADH1BP00325 375 aa13.36□□□□□ -0.27
HDAC1-208ENST00000482310 KRT14P02533 472 aa13.36□□□□□ -0.27
HDAC1-208ENST00000482310 SERPINF2P08697 491 aa13.36□□□□□ -0.27
HDAC1-208ENST00000482310 FNTAP49354 379 aa13.36□□□□□ -0.27
HDAC1-208ENST00000482310 SKOR1P84550 965 aa13.36□□□□□ -0.27
HDAC1-208ENST00000482310 NSUN2Q08J23 767 aaKnown RBP eCLIP13.36□□□□□ -0.27
HDAC1-208ENST00000482310 CNTN1Q12860 1018 aa13.36□□□□□ -0.27
HDAC1-208ENST00000482310 GALNT3Q14435 633 aa13.36□□□□□ -0.27
HDAC1-208ENST00000482310 SPARCL1Q14515 664 aa13.36□□□□□ -0.27
HDAC1-208ENST00000482310 ANGPT1Q15389 498 aa13.36□□□□□ -0.27
HDAC1-208ENST00000482310 TTC31Q49AM3 519 aaPredicted RBP13.36□□□□□ -0.27
HDAC1-208ENST00000482310 DRICH1Q6PGQ1 229 aaPredicted RBP13.36□□□□□ -0.27
HDAC1-208ENST00000482310 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.36□□□□□ -0.27
HDAC1-208ENST00000482310 PARS2Q7L3T8 475 aaKnown RBP13.36□□□□□ -0.27
HDAC1-208ENST00000482310 PRPF39Q86UA1 669 aaKnown RBP13.36□□□□□ -0.27
HDAC1-208ENST00000482310 ZSWIM9Q86XI8 627 aa13.36□□□□□ -0.27
HDAC1-208ENST00000482310 MAML2Q8IZL2 1156 aaPredicted RBP13.36□□□□□ -0.27
HDAC1-208ENST00000482310 FRMD1Q8N878 549 aa13.36□□□□□ -0.27
HDAC1-208ENST00000482310 SPATA4Q8NEY3 305 aa13.36□□□□□ -0.27
HDAC1-208ENST00000482310 ATL2Q8NHH9 583 aa13.36□□□□□ -0.27
HDAC1-208ENST00000482310 GRK7Q8WTQ7 553 aa13.36□□□□□ -0.27
HDAC1-208ENST00000482310 OXNAD1Q96HP4 312 aaPredicted RBP13.36□□□□□ -0.27
HDAC1-208ENST00000482310 PPP1R16AQ96I34 528 aa13.36□□□□□ -0.27
HDAC1-208ENST00000482310 GORASP1Q9BQQ3 440 aa13.36□□□□□ -0.27
HDAC1-208ENST00000482310 TRIM51Q9BSJ1 452 aa13.36□□□□□ -0.27
HDAC1-208ENST00000482310 SUV39H2Q9H5I1 410 aa13.36□□□□□ -0.27
HDAC1-208ENST00000482310 FBRSQ9HAH7 460 aa13.36□□□□□ -0.27
HDAC1-208ENST00000482310 FAM86C1Q9NVL1 165 aa13.36□□□□□ -0.27
HDAC1-208ENST00000482310 FBXL12Q9NXK8 326 aa13.36□□□□□ -0.27
HDAC1-208ENST00000482310 AMACRQ9UHK6 382 aa13.36□□□□□ -0.27
HDAC1-208ENST00000482310 PPM1HQ9ULR3 514 aa13.36□□□□□ -0.27
HDAC1-208ENST00000482310 CHKBQ9Y259 395 aa13.36□□□□□ -0.27
HDAC1-208ENST00000482310 DRG1Q9Y295 367 aaKnown RBP13.36□□□□□ -0.27
HDAC1-208ENST00000482310 CFAP54Q96N23 3096 aa13.36□□□□□ -0.27
HDAC1-208ENST00000482310 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.35□□□□□ -0.27
HDAC1-208ENST00000482310 A8MX80 341 aa13.35□□□□□ -0.27
HDAC1-208ENST00000482310 CCDC188H7C350 402 aa13.35□□□□□ -0.27
HDAC1-208ENST00000482310 AXIN1O15169 862 aa13.35□□□□□ -0.27
HDAC1-208ENST00000482310 TTI1O43156 1089 aa13.35□□□□□ -0.27
HDAC1-208ENST00000482310 GCATO75600 419 aa13.35□□□□□ -0.27
HDAC1-208ENST00000482310 CPP00450 1065 aa13.35□□□□□ -0.27
HDAC1-208ENST00000482310 SLC4A1P02730 911 aa13.35□□□□□ -0.27
HDAC1-208ENST00000482310 CTPS1P17812 591 aa13.35□□□□□ -0.27
HDAC1-208ENST00000482310 ITIH2P19823 946 aa13.35□□□□□ -0.27
HDAC1-208ENST00000482310 C5AR1P21730 350 aa13.35□□□□□ -0.27
HDAC1-208ENST00000482310 XPAP23025 273 aaPredicted RBP13.35□□□□□ -0.27
HDAC1-208ENST00000482310 STIP1P31948 543 aaKnown RBP13.35□□□□□ -0.27
HDAC1-208ENST00000482310 RPL22P35268 128 aaKnown RBP13.35□□□□□ -0.27
HDAC1-208ENST00000482310 CSNK1DP48730 415 aa13.35□□□□□ -0.27
HDAC1-208ENST00000482310 LMAN1P49257 510 aa13.35□□□□□ -0.27
HDAC1-208ENST00000482310 TPMTP51580 245 aa13.35□□□□□ -0.27
HDAC1-208ENST00000482310 BASP1P80723 227 aaKnown RBP13.35□□□□□ -0.27
HDAC1-208ENST00000482310 DR1Q01658 176 aa13.35□□□□□ -0.27
HDAC1-208ENST00000482310 GPS1Q13098 491 aa13.35□□□□□ -0.27
HDAC1-208ENST00000482310 SRSF5Q13243 272 aaKnown RBP13.35□□□□□ -0.27
HDAC1-208ENST00000482310 PRPSAP1Q14558 356 aa13.35□□□□□ -0.27
HDAC1-208ENST00000482310 PTPRRQ15256 657 aa13.35□□□□□ -0.27
HDAC1-208ENST00000482310 P3H1Q32P28 736 aa13.35□□□□□ -0.27
HDAC1-208ENST00000482310 ZNF805Q5CZA5 627 aa13.35□□□□□ -0.27
HDAC1-208ENST00000482310 FAM46CQ5VWP2 391 aa13.35□□□□□ -0.27
HDAC1-208ENST00000482310 PLPP6Q8IY26 295 aa13.35□□□□□ -0.27
HDAC1-208ENST00000482310 SLC25A41Q8N5S1 370 aa13.35□□□□□ -0.27
HDAC1-208ENST00000482310 TMIEQ8NEW7 156 aa13.35□□□□□ -0.27
HDAC1-208ENST00000482310 LPCAT1Q8NF37 534 aa13.35□□□□□ -0.27
HDAC1-208ENST00000482310 VOPP1Q96AW1 172 aa13.35□□□□□ -0.27
HDAC1-208ENST00000482310 RTP4Q96DX8 246 aa13.35□□□□□ -0.27
HDAC1-208ENST00000482310 IFT43Q96FT9 208 aa13.35□□□□□ -0.27
HDAC1-208ENST00000482310 IMP4Q96G21 291 aaKnown RBP13.35□□□□□ -0.27
HDAC1-208ENST00000482310 SMIM14Q96QK8 99 aa13.35□□□□□ -0.27
HDAC1-208ENST00000482310 TUBGCP5Q96RT8 1024 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms