RNA–Protein interactions for RNA: ENST00000481999.1

CHD3-211, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 2,515 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-211ENST00000481999 RCN1Q15293 331 aa14.6□□□□□ -0.07
CHD3-211ENST00000481999 TAF12Q16514 161 aa14.6□□□□□ -0.07
CHD3-211ENST00000481999 ACSBG2Q5FVE4 666 aa14.6□□□□□ -0.07
CHD3-211ENST00000481999 TXNDC8Q6A555 127 aa14.6□□□□□ -0.07
CHD3-211ENST00000481999 TIGD7Q6NT04 549 aaPredicted RBP14.6□□□□□ -0.07
CHD3-211ENST00000481999 RANBP10Q6VN20 620 aa14.6□□□□□ -0.07
CHD3-211ENST00000481999 LDB1Q86U70 411 aaPredicted RBP14.6□□□□□ -0.07
CHD3-211ENST00000481999 DNAJC9Q8WXX5 260 aa14.6□□□□□ -0.07
CHD3-211ENST00000481999 RBBP8Q99708 897 aa14.6□□□□□ -0.07
CHD3-211ENST00000481999 SPON2Q9BUD6 331 aa14.6□□□□□ -0.07
CHD3-211ENST00000481999 UXTQ9UBK9 157 aaPredicted RBP14.6□□□□□ -0.07
CHD3-211ENST00000481999 MTF2Q9Y483 593 aaPredicted RBP14.6□□□□□ -0.07
CHD3-211ENST00000481999 BACE2Q9Y5Z0 518 aa14.6□□□□□ -0.07
CHD3-211ENST00000481999 PTPRSQ13332 1948 aa14.6□□□□□ -0.07
CHD3-211ENST00000481999 A0A0U1RQS6 177 aa14.6□□□□□ -0.07
CHD3-211ENST00000481999 DRGXA6NNA5 263 aa14.6□□□□□ -0.07
CHD3-211ENST00000481999 ZBBXA8MT70 800 aa14.6□□□□□ -0.07
CHD3-211ENST00000481999 B2RBV5 119 aa14.6□□□□□ -0.07
CHD3-211ENST00000481999 F5H5T6 163 aa14.6□□□□□ -0.07
CHD3-211ENST00000481999 GLRA3O75311 464 aa14.6□□□□□ -0.07
CHD3-211ENST00000481999 RAG1P15918 1043 aa14.6□□□□□ -0.07
CHD3-211ENST00000481999 ACADSP16219 412 aa14.6□□□□□ -0.07
CHD3-211ENST00000481999 VHLP40337 213 aa14.6□□□□□ -0.07
CHD3-211ENST00000481999 RAP1GDS1P52306 607 aa14.6□□□□□ -0.07
CHD3-211ENST00000481999 NDST2P52849 883 aa14.6□□□□□ -0.07
CHD3-211ENST00000481999 ZNF33AQ06730 810 aa14.6□□□□□ -0.07
CHD3-211ENST00000481999 SERINC3Q13530 473 aa14.6□□□□□ -0.07
CHD3-211ENST00000481999 PTPRRQ15256 657 aa14.6□□□□□ -0.07
CHD3-211ENST00000481999 HECTD3Q5T447 861 aa14.6□□□□□ -0.07
CHD3-211ENST00000481999 TRIM68Q6AZZ1 485 aa14.6□□□□□ -0.07
CHD3-211ENST00000481999 KDELC1Q6UW63 502 aa14.6□□□□□ -0.07
CHD3-211ENST00000481999 DNAJB7Q7Z6W7 309 aaPredicted RBP14.6□□□□□ -0.07
CHD3-211ENST00000481999 MFSD6LQ8IWD5 586 aa14.6□□□□□ -0.07
CHD3-211ENST00000481999 LMNTD2Q8IXW0 634 aa14.6□□□□□ -0.07
CHD3-211ENST00000481999 CXXC1Q9P0U4 656 aaPredicted RBP14.6□□□□□ -0.07
CHD3-211ENST00000481999 TAGLN3Q9UI15 199 aa14.6□□□□□ -0.07
CHD3-211ENST00000481999 SUFUQ9UMX1 484 aa14.6□□□□□ -0.07
CHD3-211ENST00000481999 DNAH14Q0VDD8 3507 aa14.59□□□□□ -0.07
CHD3-211ENST00000481999 PHGDHO43175 533 aaKnown RBP14.59□□□□□ -0.07
CHD3-211ENST00000481999 ACSL4O60488 711 aa14.59□□□□□ -0.07
CHD3-211ENST00000481999 LYPLA1O75608 230 aaPredicted RBP14.59□□□□□ -0.07
CHD3-211ENST00000481999 ANXA9O76027 345 aa14.59□□□□□ -0.07
CHD3-211ENST00000481999 PSMG1O95456 288 aa14.59□□□□□ -0.07
CHD3-211ENST00000481999 ENO1P06733 434 aaKnown RBP14.59□□□□□ -0.07
CHD3-211ENST00000481999 RGRP47804 291 aa14.59□□□□□ -0.07
CHD3-211ENST00000481999 ALDH1A3P47895 512 aa14.59□□□□□ -0.07
CHD3-211ENST00000481999 RING1Q06587 406 aa14.59□□□□□ -0.07
CHD3-211ENST00000481999 SMARCB1Q12824 385 aa14.59□□□□□ -0.07
CHD3-211ENST00000481999 MPP3Q13368 585 aa14.59□□□□□ -0.07
CHD3-211ENST00000481999 HNRNPDQ14103 355 aaKnown RBP14.59□□□□□ -0.07
CHD3-211ENST00000481999 GRM3Q14832 879 aa14.59□□□□□ -0.07
CHD3-211ENST00000481999 MUM1Q2TAK8 710 aa14.59□□□□□ -0.07
CHD3-211ENST00000481999 ZNF789Q5FWF6 425 aa14.59□□□□□ -0.07
CHD3-211ENST00000481999 TREML1Q86YW5 311 aa14.59□□□□□ -0.07
CHD3-211ENST00000481999 IMP4Q96G21 291 aaKnown RBP14.59□□□□□ -0.07
CHD3-211ENST00000481999 KIFC1Q9BW19 673 aa14.59□□□□□ -0.07
CHD3-211ENST00000481999 SORCS3Q9UPU3 1222 aa14.59□□□□□ -0.07
CHD3-211ENST00000481999 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.59□□□□□ -0.07
CHD3-211ENST00000481999 OR51F1A6NGY5 319 aa14.59□□□□□ -0.07
CHD3-211ENST00000481999 SPECC1L-ADORA2AF8WAN1 911 aa14.59□□□□□ -0.07
CHD3-211ENST00000481999 NVLO15381 856 aaKnown RBP14.59□□□□□ -0.07
CHD3-211ENST00000481999 SERPINA6P08185 405 aa14.59□□□□□ -0.07
CHD3-211ENST00000481999 HTR7P34969 479 aa14.59□□□□□ -0.07
CHD3-211ENST00000481999 ABL2P42684 1182 aa14.59□□□□□ -0.07
CHD3-211ENST00000481999 NPY2RP49146 381 aa14.59□□□□□ -0.07
CHD3-211ENST00000481999 HARS2P49590 506 aaKnown RBP14.59□□□□□ -0.07
CHD3-211ENST00000481999 RENBPP51606 427 aa14.59□□□□□ -0.07
CHD3-211ENST00000481999 SLC34A1Q06495 639 aa14.59□□□□□ -0.07
CHD3-211ENST00000481999 GALNT3Q14435 633 aa14.59□□□□□ -0.07
CHD3-211ENST00000481999 FASTKD1Q53R41 847 aaKnown RBP14.59□□□□□ -0.07
CHD3-211ENST00000481999 IL31Q6EBC2 164 aa14.59□□□□□ -0.07
CHD3-211ENST00000481999 PKN3Q6P5Z2 889 aa14.59□□□□□ -0.07
CHD3-211ENST00000481999 LINGO4Q6UY18 593 aa14.59□□□□□ -0.07
CHD3-211ENST00000481999 WDR75Q8IWA0 830 aaKnown RBP14.59□□□□□ -0.07
CHD3-211ENST00000481999 ARRDC2Q8TBH0 407 aa14.59□□□□□ -0.07
CHD3-211ENST00000481999 C2orf15Q8WU43 125 aaKnown RBP14.59□□□□□ -0.07
CHD3-211ENST00000481999 VPS39Q96JC1 886 aa14.59□□□□□ -0.07
CHD3-211ENST00000481999 RILPQ96NA2 401 aa14.59□□□□□ -0.07
CHD3-211ENST00000481999 CPNE1Q99829 537 aa14.59□□□□□ -0.07
CHD3-211ENST00000481999 SEMA3CQ99985 751 aa14.59□□□□□ -0.07
CHD3-211ENST00000481999 AGO1Q9UL18 857 aaKnown RBP14.59□□□□□ -0.07
CHD3-211ENST00000481999 SLC39A10Q9ULF5 831 aa14.59□□□□□ -0.07
CHD3-211ENST00000481999 CCDC85CA6NKD9 419 aa14.58□□□□□ -0.07
CHD3-211ENST00000481999 H3BNC9 293 aa14.58□□□□□ -0.07
CHD3-211ENST00000481999 SMNDC1O75940 238 aaKnown RBP eCLIP14.58□□□□□ -0.07
CHD3-211ENST00000481999 KRT36O76013 467 aa14.58□□□□□ -0.07
CHD3-211ENST00000481999 TIMP1P01033 207 aa14.58□□□□□ -0.07
CHD3-211ENST00000481999 AHSGP02765 367 aa14.58□□□□□ -0.07
CHD3-211ENST00000481999 URODP06132 367 aa14.58□□□□□ -0.07
CHD3-211ENST00000481999 EN2P19622 333 aaPredicted RBP14.58□□□□□ -0.07
CHD3-211ENST00000481999 HOXD9P28356 352 aaPredicted RBP14.58□□□□□ -0.07
CHD3-211ENST00000481999 ARRB2P32121 409 aa14.58□□□□□ -0.07
CHD3-211ENST00000481999 CPA2P48052 419 aa14.58□□□□□ -0.07
CHD3-211ENST00000481999 LIMK2P53671 638 aa14.58□□□□□ -0.07
CHD3-211ENST00000481999 CYP4F8P98187 520 aa14.58□□□□□ -0.07
CHD3-211ENST00000481999 DNAL1Q4LDG9 190 aa14.58□□□□□ -0.07
CHD3-211ENST00000481999 FSCBQ5H9T9 825 aa14.58□□□□□ -0.07
CHD3-211ENST00000481999 SNX30Q5VWJ9 437 aa14.58□□□□□ -0.07
CHD3-211ENST00000481999 MBLAC2Q68D91 279 aa14.58□□□□□ -0.07
CHD3-211ENST00000481999 KLHDC8BQ8IXV7 354 aa14.58□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms