RNA–Protein interactions for RNA: ENST00000480104.5

USP11-208, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 697 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-208ENST00000480104 SRP54P61011 504 aaKnown RBP12.05□□□□□ -0.48
USP11-208ENST00000480104 ZNF394Q53GI3 561 aa12.05□□□□□ -0.48
USP11-208ENST00000480104 NKAIN2Q5VXU1 208 aa12.05□□□□□ -0.48
USP11-208ENST00000480104 SPECC1LQ69YQ0 1117 aa12.05□□□□□ -0.48
USP11-208ENST00000480104 CEACAM20Q6UY09 585 aa12.05□□□□□ -0.48
USP11-208ENST00000480104 TAF8Q7Z7C8 310 aa12.05□□□□□ -0.48
USP11-208ENST00000480104 ZNF295-AS1Q8N0V1 137 aa12.05□□□□□ -0.48
USP11-208ENST00000480104 CISD2Q8N5K1 135 aaKnown RBP12.05□□□□□ -0.48
USP11-208ENST00000480104 RBMXL3Q8N7X1 1067 aaKnown RBP12.05□□□□□ -0.48
USP11-208ENST00000480104 XXYLT1Q8NBI6 393 aa12.05□□□□□ -0.48
USP11-208ENST00000480104 OR52K2Q8NGK3 314 aa12.05□□□□□ -0.48
USP11-208ENST00000480104 TATDN2Q93075 761 aa12.05□□□□□ -0.48
USP11-208ENST00000480104 PDXPQ96GD0 296 aa12.05□□□□□ -0.48
USP11-208ENST00000480104 LRRC4Q9HBW1 653 aa12.05□□□□□ -0.48
USP11-208ENST00000480104 APMAPQ9HDC9 416 aa12.05□□□□□ -0.48
USP11-208ENST00000480104 VPS28Q9UK41 221 aa12.05□□□□□ -0.48
USP11-208ENST00000480104 WASF2Q9Y6W5 498 aa12.05□□□□□ -0.48
USP11-208ENST00000480104 PIPSLA2A3N6 862 aa12.04□□□□□ -0.48
USP11-208ENST00000480104 TMEM200CA6NKL6 621 aa12.04□□□□□ -0.48
USP11-208ENST00000480104 RHPN2P1A8MT19 583 aa12.04□□□□□ -0.48
USP11-208ENST00000480104 NEMP1O14524 444 aa12.04□□□□□ -0.48
USP11-208ENST00000480104 EPB41L2O43491 1005 aaKnown RBP12.04□□□□□ -0.48
USP11-208ENST00000480104 TSPAN6O43657 245 aa12.04□□□□□ -0.48
USP11-208ENST00000480104 TACR2P21452 398 aa12.04□□□□□ -0.48
USP11-208ENST00000480104 RRM1P23921 792 aa12.04□□□□□ -0.48
USP11-208ENST00000480104 MAN1A1P33908 653 aa12.04□□□□□ -0.48
USP11-208ENST00000480104 ABL2P42684 1182 aa12.04□□□□□ -0.48
USP11-208ENST00000480104 NOP2P46087 812 aaKnown RBP12.04□□□□□ -0.48
USP11-208ENST00000480104 CCL11P51671 97 aa12.04□□□□□ -0.48
USP11-208ENST00000480104 MC2RQ01718 297 aa12.04□□□□□ -0.48
USP11-208ENST00000480104 RILPL1Q5EBL4 403 aa12.04□□□□□ -0.48
USP11-208ENST00000480104 MIIPQ5JXC2 388 aa12.04□□□□□ -0.48
USP11-208ENST00000480104 IQCKQ8N0W5 287 aa12.04□□□□□ -0.48
USP11-208ENST00000480104 SIX6OS1Q8N1H7 587 aa12.04□□□□□ -0.48
USP11-208ENST00000480104 ATP11CQ8NB49 1132 aa12.04□□□□□ -0.48
USP11-208ENST00000480104 ZPBPQ9BS86 351 aa12.04□□□□□ -0.48
USP11-208ENST00000480104 FEM1AQ9BSK4 669 aa12.04□□□□□ -0.48
USP11-208ENST00000480104 TNKS2Q9H2K2 1166 aa12.04□□□□□ -0.48
USP11-208ENST00000480104 DPEP2Q9H4A9 486 aa12.04□□□□□ -0.48
USP11-208ENST00000480104 PANK4Q9NVE7 773 aa12.04□□□□□ -0.48
USP11-208ENST00000480104 KLQ9UEF7 1012 aa12.04□□□□□ -0.48
USP11-208ENST00000480104 HS3ST2Q9Y278 367 aa12.04□□□□□ -0.48
USP11-208ENST00000480104 TOR1BO14657 336 aa12.03□□□□□ -0.48
USP11-208ENST00000480104 TGFB1I1O43294 461 aa12.03□□□□□ -0.48
USP11-208ENST00000480104 SMAD6O43541 496 aaKnown RBP12.03□□□□□ -0.48
USP11-208ENST00000480104 EIF5BO60841 1220 aaKnown RBP12.03□□□□□ -0.48
USP11-208ENST00000480104 CREG1O75629 220 aa12.03□□□□□ -0.48
USP11-208ENST00000480104 BPIP17213 487 aa12.03□□□□□ -0.48
USP11-208ENST00000480104 L1CAMP32004 1257 aa12.03□□□□□ -0.48
USP11-208ENST00000480104 AP3M2P53677 418 aa12.03□□□□□ -0.48
USP11-208ENST00000480104 SLC8A3P57103 927 aa12.03□□□□□ -0.48
USP11-208ENST00000480104 DAOAP59103 153 aa12.03□□□□□ -0.48
USP11-208ENST00000480104 NUCB2P80303 420 aa12.03□□□□□ -0.48
USP11-208ENST00000480104 ART3Q13508 389 aa12.03□□□□□ -0.48
USP11-208ENST00000480104 MAP7Q14244 749 aa12.03□□□□□ -0.48
USP11-208ENST00000480104 NFATC4Q14934 902 aa12.03□□□□□ -0.48
USP11-208ENST00000480104 NR1D2Q14995 579 aa12.03□□□□□ -0.48
USP11-208ENST00000480104 IRF4Q15306 451 aa12.03□□□□□ -0.48
USP11-208ENST00000480104 CHRNA6Q15825 494 aa12.03□□□□□ -0.48
USP11-208ENST00000480104 ENPP7Q6UWV6 458 aa12.03□□□□□ -0.48
USP11-208ENST00000480104 ZNF517Q6ZMY9 492 aaPredicted RBP12.03□□□□□ -0.48
USP11-208ENST00000480104 DPY19L3Q6ZPD9 716 aa12.03□□□□□ -0.48
USP11-208ENST00000480104 ANKRD52Q8NB46 1076 aa12.03□□□□□ -0.48
USP11-208ENST00000480104 TP53I13Q8NBR0 393 aaPredicted RBP12.03□□□□□ -0.48
USP11-208ENST00000480104 TAF4BQ92750 862 aa12.03□□□□□ -0.48
USP11-208ENST00000480104 APOBEC3GQ9HC16 384 aaKnown RBP12.03□□□□□ -0.48
USP11-208ENST00000480104 STK17AQ9UEE5 414 aa12.03□□□□□ -0.48
USP11-208ENST00000480104 OSGIN2Q9Y236 505 aa12.03□□□□□ -0.48
USP11-208ENST00000480104 OR51B4Q9Y5P0 310 aa12.03□□□□□ -0.48
USP11-208ENST00000480104 KLF2Q9Y5W3 355 aaPredicted RBP12.03□□□□□ -0.48
USP11-208ENST00000480104 RTTNQ86VV8 2226 aa12.02□□□□□ -0.48
USP11-208ENST00000480104 TCAF2A6NFQ2 919 aa12.02□□□□□ -0.49
USP11-208ENST00000480104 F5H5T6 163 aa12.02□□□□□ -0.49
USP11-208ENST00000480104 XPO1O14980 1071 aaKnown RBP12.02□□□□□ -0.49
USP11-208ENST00000480104 SNAP91O60641 907 aa12.02□□□□□ -0.49
USP11-208ENST00000480104 ENDOD1O94919 500 aa12.02□□□□□ -0.49
USP11-208ENST00000480104 RPN1P04843 607 aaKnown RBP12.02□□□□□ -0.49
USP11-208ENST00000480104 CAPN3P20807 821 aa12.02□□□□□ -0.49
USP11-208ENST00000480104 SSTR2P30874 369 aa12.02□□□□□ -0.49
USP11-208ENST00000480104 PIK3CAP42336 1068 aa12.02□□□□□ -0.49
USP11-208ENST00000480104 NNTQ13423 1086 aa12.02□□□□□ -0.49
USP11-208ENST00000480104 GOLGA7BQ2TAP0 167 aa12.02□□□□□ -0.49
USP11-208ENST00000480104 ZACNQ401N2 412 aa12.02□□□□□ -0.49
USP11-208ENST00000480104 C22orf39Q6P5X5 142 aa12.02□□□□□ -0.49
USP11-208ENST00000480104 STXBP4Q6ZWJ1 553 aa12.02□□□□□ -0.49
USP11-208ENST00000480104 TAOK1Q7L7X3 1001 aa12.02□□□□□ -0.49
USP11-208ENST00000480104 PARD3BQ8TEW8 1205 aa12.02□□□□□ -0.49
USP11-208ENST00000480104 SLC39A13Q96H72 371 aa12.02□□□□□ -0.49
USP11-208ENST00000480104 GSX1Q9H4S2 264 aaPredicted RBP12.02□□□□□ -0.49
USP11-208ENST00000480104 CYP3A43Q9HB55 503 aa12.02□□□□□ -0.49
USP11-208ENST00000480104 ACSS2Q9NR19 701 aa12.02□□□□□ -0.49
USP11-208ENST00000480104 TLR6Q9Y2C9 796 aa12.02□□□□□ -0.49
USP11-208ENST00000480104 LRP4O75096 1905 aa12.01□□□□□ -0.49
USP11-208ENST00000480104 HLA-DRAP01903 254 aa12.01□□□□□ -0.49
USP11-208ENST00000480104 HNRNPH3P31942 346 aaKnown RBP12.01□□□□□ -0.49
USP11-208ENST00000480104 CASP14P31944 242 aa12.01□□□□□ -0.49
USP11-208ENST00000480104 LONP1P36776 959 aaKnown RBP12.01□□□□□ -0.49
USP11-208ENST00000480104 PEX5P50542 639 aa12.01□□□□□ -0.49
USP11-208ENST00000480104 CLDN10P78369 228 aa12.01□□□□□ -0.49
USP11-208ENST00000480104 PLEKHN1Q494U1 663 aaPredicted RBP12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms