RNA–Protein interactions for RNA: ENST00000479307.5

RFC4-212, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 1,043 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-212ENST00000479307 MTNR1AP48039 350 aa5.35□□□□□ -1.55
RFC4-212ENST00000479307 CFHR1Q03591 330 aa5.35□□□□□ -1.55
RFC4-212ENST00000479307 ZBTB16Q05516 673 aa5.35□□□□□ -1.55
RFC4-212ENST00000479307 GALNT3Q14435 633 aa5.35□□□□□ -1.55
RFC4-212ENST00000479307 IL13RA2Q14627 380 aa5.35□□□□□ -1.55
RFC4-212ENST00000479307 KRTAP15-1Q3LI76 137 aa5.35□□□□□ -1.55
RFC4-212ENST00000479307 PLK5Q496M5 336 aa5.35□□□□□ -1.55
RFC4-212ENST00000479307 C5orf22Q49AR2 442 aa5.35□□□□□ -1.55
RFC4-212ENST00000479307 SLC9C1Q4G0N8 1177 aa5.35□□□□□ -1.55
RFC4-212ENST00000479307 ARL13AQ5H913 290 aaPredicted RBP5.35□□□□□ -1.55
RFC4-212ENST00000479307 EARS2Q5JPH6 523 aaKnown RBP5.35□□□□□ -1.55
RFC4-212ENST00000479307 SH2D4BQ5SQS7 431 aa5.35□□□□□ -1.55
RFC4-212ENST00000479307 FAM171A1Q5VUB5 890 aa5.35□□□□□ -1.55
RFC4-212ENST00000479307 MIS18BP1Q6P0N0 1132 aa5.35□□□□□ -1.55
RFC4-212ENST00000479307 CYB5R4Q7L1T6 521 aa5.35□□□□□ -1.55
RFC4-212ENST00000479307 RNF144BQ7Z419 303 aa5.35□□□□□ -1.55
RFC4-212ENST00000479307 NEK8Q86SG6 692 aa5.35□□□□□ -1.55
RFC4-212ENST00000479307 RAB40AQ8WXH6 277 aa5.35□□□□□ -1.55
RFC4-212ENST00000479307 PIGBQ92521 554 aa5.35□□□□□ -1.55
RFC4-212ENST00000479307 HDAC2Q92769 488 aaKnown RBP5.35□□□□□ -1.55
RFC4-212ENST00000479307 ZUFSPQ96AP4 578 aa5.35□□□□□ -1.55
RFC4-212ENST00000479307 ZBTB10Q96DT7 871 aa5.35□□□□□ -1.55
RFC4-212ENST00000479307 IFT27Q9BW83 186 aa5.35□□□□□ -1.55
RFC4-212ENST00000479307 XRN2Q9H0D6 950 aaKnown RBP eCLIP5.35□□□□□ -1.55
RFC4-212ENST00000479307 FBXO40Q9UH90 709 aa5.35□□□□□ -1.55
RFC4-212ENST00000479307 DHDHQ9UQ10 334 aa5.35□□□□□ -1.55
RFC4-212ENST00000479307 EYSQ5T1H1 3165 aa5.34□□□□□ -1.55
RFC4-212ENST00000479307 USP42Q9H9J4 1324 aaKnown RBP5.34□□□□□ -1.55
RFC4-212ENST00000479307 C2CD4BA6NLJ0 364 aa5.34□□□□□ -1.55
RFC4-212ENST00000479307 TMEM63AO94886 807 aa5.34□□□□□ -1.55
RFC4-212ENST00000479307 CD4P01730 458 aa5.34□□□□□ -1.55
RFC4-212ENST00000479307 ATP1A3P13637 1013 aa5.34□□□□□ -1.55
RFC4-212ENST00000479307 EPHX2P34913 555 aa5.34□□□□□ -1.55
RFC4-212ENST00000479307 RFC4P35249 363 aa5.34□□□□□ -1.55
RFC4-212ENST00000479307 SKIV2L2P42285 1042 aaKnown RBP5.34□□□□□ -1.55
RFC4-212ENST00000479307 PAFAH1B1P43034 410 aa5.34□□□□□ -1.55
RFC4-212ENST00000479307 HMGA2P52926 109 aa5.34□□□□□ -1.55
RFC4-212ENST00000479307 CASP6P55212 293 aa5.34□□□□□ -1.55
RFC4-212ENST00000479307 GEMIN4P57678 1058 aaKnown RBP5.34□□□□□ -1.55
RFC4-212ENST00000479307 RPS13P62277 151 aaKnown RBP5.34□□□□□ -1.55
RFC4-212ENST00000479307 STIM1Q13586 685 aa5.34□□□□□ -1.55
RFC4-212ENST00000479307 NAA25Q14CX7 972 aa5.34□□□□□ -1.55
RFC4-212ENST00000479307 AP5B1Q2VPB7 878 aa5.34□□□□□ -1.55
RFC4-212ENST00000479307 KIAA1614Q5VZ46 1190 aa5.34□□□□□ -1.55
RFC4-212ENST00000479307 CST9Q5W186 159 aa5.34□□□□□ -1.55
RFC4-212ENST00000479307 ISM2Q6H9L7 571 aa5.34□□□□□ -1.55
RFC4-212ENST00000479307 ZNF66Q6ZN08 573 aa5.34□□□□□ -1.55
RFC4-212ENST00000479307 FAM57BQ71RH2 274 aa5.34□□□□□ -1.55
RFC4-212ENST00000479307 CTU1Q7Z7A3 348 aaKnown RBP5.34□□□□□ -1.55
RFC4-212ENST00000479307 SCAIQ8N9R8 606 aa5.34□□□□□ -1.55
RFC4-212ENST00000479307 IP6K1Q92551 441 aa5.34□□□□□ -1.55
RFC4-212ENST00000479307 CNOT9Q92600 299 aaKnown RBP5.34□□□□□ -1.55
RFC4-212ENST00000479307 ELP4Q96EB1 424 aa5.34□□□□□ -1.55
RFC4-212ENST00000479307 TEFMQ96QE5 360 aaKnown RBP5.34□□□□□ -1.55
RFC4-212ENST00000479307 EPHX3Q9H6B9 360 aa5.34□□□□□ -1.55
RFC4-212ENST00000479307 MOV10Q9HCE1 1003 aaKnown RBP5.34□□□□□ -1.55
RFC4-212ENST00000479307 PAPOLBQ9NRJ5 636 aaKnown RBP5.34□□□□□ -1.55
RFC4-212ENST00000479307 IRAK4Q9NWZ3 460 aa5.34□□□□□ -1.55
RFC4-212ENST00000479307 SLC25A10Q9UBX3 287 aaPredicted RBP5.34□□□□□ -1.55
RFC4-212ENST00000479307 HACL1Q9UJ83 578 aa5.34□□□□□ -1.55
RFC4-212ENST00000479307 FBXO4Q9UKT5 387 aa5.34□□□□□ -1.55
RFC4-212ENST00000479307 PAPPA2Q9BXP8 1791 aa5.34□□□□□ -1.56
RFC4-212ENST00000479307 TJP1Q07157 1748 aa5.34□□□□□ -1.56
RFC4-212ENST00000479307 KTN1Q86UP2 1357 aaKnown RBP5.33□□□□□ -1.56
RFC4-212ENST00000479307 CENPJQ9HC77 1338 aaPredicted RBP5.33□□□□□ -1.56
RFC4-212ENST00000479307 DPPA5A6NC42 116 aa5.33□□□□□ -1.56
RFC4-212ENST00000479307 OR6C68A6NDL8 312 aa5.33□□□□□ -1.56
RFC4-212ENST00000479307 C17orf100A8MU93 164 aa5.33□□□□□ -1.56
RFC4-212ENST00000479307 F5H0A9 414 aaPredicted RBP5.33□□□□□ -1.56
RFC4-212ENST00000479307 PPP6CO00743 305 aa5.33□□□□□ -1.56
RFC4-212ENST00000479307 F9P00740 461 aa5.33□□□□□ -1.56
RFC4-212ENST00000479307 FCGR2AP12318 317 aa5.33□□□□□ -1.56
RFC4-212ENST00000479307 ABCD3P28288 659 aa5.33□□□□□ -1.56
RFC4-212ENST00000479307 RXRGP48443 463 aa5.33□□□□□ -1.56
RFC4-212ENST00000479307 CCT4P50991 539 aaKnown RBP5.33□□□□□ -1.56
RFC4-212ENST00000479307 CYP2J2P51589 502 aa5.33□□□□□ -1.56
RFC4-212ENST00000479307 CDH15P55291 814 aa5.33□□□□□ -1.56
RFC4-212ENST00000479307 GHRHRQ02643 423 aa5.33□□□□□ -1.56
RFC4-212ENST00000479307 SIM2Q14190 667 aaPredicted RBP5.33□□□□□ -1.56
RFC4-212ENST00000479307 PGM5Q15124 567 aa5.33□□□□□ -1.56
RFC4-212ENST00000479307 SLC18A3Q16572 532 aa5.33□□□□□ -1.56
RFC4-212ENST00000479307 PRICKLE4Q2TBC4 344 aa5.33□□□□□ -1.56
RFC4-212ENST00000479307 ZNF766Q5HY98 468 aa5.33□□□□□ -1.56
RFC4-212ENST00000479307 INO80CQ6PI98 192 aaPredicted RBP5.33□□□□□ -1.56
RFC4-212ENST00000479307 IGFN1Q86VF2 1251 aa5.33□□□□□ -1.56
RFC4-212ENST00000479307 ADGRF4Q8IZF3 695 aa5.33□□□□□ -1.56
RFC4-212ENST00000479307 SETD9Q8NE22 299 aa5.33□□□□□ -1.56
RFC4-212ENST00000479307 NFKBIDQ8NI38 313 aa5.33□□□□□ -1.56
RFC4-212ENST00000479307 DPF1Q92782 380 aa5.33□□□□□ -1.56
RFC4-212ENST00000479307 ZG16BQ96DA0 208 aa5.33□□□□□ -1.56
RFC4-212ENST00000479307 C7orf26Q96N11 449 aa5.33□□□□□ -1.56
RFC4-212ENST00000479307 EYA3Q99504 573 aa5.33□□□□□ -1.56
RFC4-212ENST00000479307 CLSTN3Q9BQT9 956 aa5.33□□□□□ -1.56
RFC4-212ENST00000479307 PIMREGQ9BSJ6 248 aa5.33□□□□□ -1.56
RFC4-212ENST00000479307 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP5.33□□□□□ -1.56
RFC4-212ENST00000479307 FRMD8Q9BZ67 464 aaPredicted RBP5.33□□□□□ -1.56
RFC4-212ENST00000479307 LMAN2LQ9H0V9 348 aa5.33□□□□□ -1.56
RFC4-212ENST00000479307 VEZTQ9HBM0 779 aa5.33□□□□□ -1.56
RFC4-212ENST00000479307 HDAC6Q9UBN7 1215 aa5.33□□□□□ -1.56
RFC4-212ENST00000479307 LAMB4A4D0S4 1761 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms