RNA–Protein interactions for RNA: ENST00000478232.1

RCC1-211, Transcript of regulator of chromosome condensation 1, humanhuman

TSL 2

Gene RCC1, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCC1-211ENST00000478232 CSNK1DP48730 415 aa13.93□□□□□ -0.18
RCC1-211ENST00000478232 PAPOLAP51003 745 aaKnown RBP13.93□□□□□ -0.18
RCC1-211ENST00000478232 PFN3P60673 137 aa13.93□□□□□ -0.18
RCC1-211ENST00000478232 DAB2P98082 770 aa13.93□□□□□ -0.18
RCC1-211ENST00000478232 TARDBPQ13148 414 aaKnown RBP eCLIP13.93□□□□□ -0.18
RCC1-211ENST00000478232 PTK2BQ14289 1009 aa13.93□□□□□ -0.18
RCC1-211ENST00000478232 CA9Q16790 459 aa13.93□□□□□ -0.18
RCC1-211ENST00000478232 ZNF542PQ5EBM4 170 aa13.93□□□□□ -0.18
RCC1-211ENST00000478232 HES3Q5TGS1 186 aa13.93□□□□□ -0.18
RCC1-211ENST00000478232 PARGQ86W56 976 aa13.93□□□□□ -0.18
RCC1-211ENST00000478232 DNAAF5Q86Y56 855 aa13.93□□□□□ -0.18
RCC1-211ENST00000478232 FAM181AQ8N9Y4 354 aa13.93□□□□□ -0.18
RCC1-211ENST00000478232 NETO2Q8NC67 525 aa13.93□□□□□ -0.18
RCC1-211ENST00000478232 CXorf40AQ8TE69 158 aa13.93□□□□□ -0.18
RCC1-211ENST00000478232 RFFLQ8WZ73 363 aa13.93□□□□□ -0.18
RCC1-211ENST00000478232 SYN2Q92777 582 aaPredicted RBP13.93□□□□□ -0.18
RCC1-211ENST00000478232 ZNF641Q96N77 438 aaPredicted RBP13.93□□□□□ -0.18
RCC1-211ENST00000478232 SNRNP25Q9BV90 132 aaKnown RBP13.93□□□□□ -0.18
RCC1-211ENST00000478232 DUSP23Q9BVJ7 150 aa13.93□□□□□ -0.18
RCC1-211ENST00000478232 SUV39H2Q9H5I1 410 aa13.93□□□□□ -0.18
RCC1-211ENST00000478232 PDFQ9HBH1 243 aa13.93□□□□□ -0.18
RCC1-211ENST00000478232 EVA1BQ9NVM1 165 aa13.93□□□□□ -0.18
RCC1-211ENST00000478232 NLGN3Q9NZ94 848 aa13.93□□□□□ -0.18
RCC1-211ENST00000478232 LHX3Q9UBR4 397 aa13.93□□□□□ -0.18
RCC1-211ENST00000478232 GGT7Q9UJ14 662 aa13.93□□□□□ -0.18
RCC1-211ENST00000478232 ITM2BQ9Y287 266 aa13.93□□□□□ -0.18
RCC1-211ENST00000478232 CFAP47Q6ZTR5 3102 aa13.93□□□□□ -0.18
RCC1-211ENST00000478232 KNTC1P50748 2209 aa13.92□□□□□ -0.18
RCC1-211ENST00000478232 PKD1L2Q7Z442 2459 aa13.92□□□□□ -0.18
RCC1-211ENST00000478232 ANKRD11Q6UB99 2663 aaPredicted RBP13.92□□□□□ -0.18
RCC1-211ENST00000478232 H3BM21 787 aa13.92□□□□□ -0.18
RCC1-211ENST00000478232 RIOK3O14730 519 aaKnown RBP13.92□□□□□ -0.18
RCC1-211ENST00000478232 INSIG1O15503 277 aa13.92□□□□□ -0.18
RCC1-211ENST00000478232 FFAR2O15552 330 aa13.92□□□□□ -0.18
RCC1-211ENST00000478232 MMP20O60882 483 aa13.92□□□□□ -0.18
RCC1-211ENST00000478232 CKMT1AP12532 417 aa13.92□□□□□ -0.18
RCC1-211ENST00000478232 ERCC2P18074 760 aa13.92□□□□□ -0.18
RCC1-211ENST00000478232 DUSP3P51452 185 aaPredicted RBP13.92□□□□□ -0.18
RCC1-211ENST00000478232 THOP1P52888 689 aa13.92□□□□□ -0.18
RCC1-211ENST00000478232 YPEL5P62699 121 aa13.92□□□□□ -0.18
RCC1-211ENST00000478232 ELP6Q0PNE2 266 aa13.92□□□□□ -0.18
RCC1-211ENST00000478232 PDE1CQ14123 709 aaPredicted RBP13.92□□□□□ -0.18
RCC1-211ENST00000478232 RFTN1Q14699 578 aaPredicted RBP13.92□□□□□ -0.18
RCC1-211ENST00000478232 UGP2Q16851 508 aa13.92□□□□□ -0.18
RCC1-211ENST00000478232 TMEM52BQ4KMG9 183 aa13.92□□□□□ -0.18
RCC1-211ENST00000478232 BOLA3Q53S33 107 aa13.92□□□□□ -0.18
RCC1-211ENST00000478232 AFMIDQ63HM1 303 aa13.92□□□□□ -0.18
RCC1-211ENST00000478232 E4F1Q66K89 784 aaPredicted RBP13.92□□□□□ -0.18
RCC1-211ENST00000478232 RFX8Q6ZV50 586 aa13.92□□□□□ -0.18
RCC1-211ENST00000478232 LZTR1Q8N653 840 aa13.92□□□□□ -0.18
RCC1-211ENST00000478232 BTN2A2Q8WVV5 523 aa13.92□□□□□ -0.18
RCC1-211ENST00000478232 ZNF653Q96CK0 615 aa13.92□□□□□ -0.18
RCC1-211ENST00000478232 CELF6Q96J87 481 aaKnown RBP13.92□□□□□ -0.18
RCC1-211ENST00000478232 TUBGCP5Q96RT8 1024 aa13.92□□□□□ -0.18
RCC1-211ENST00000478232 TRIM7Q9C029 511 aa13.92□□□□□ -0.18
RCC1-211ENST00000478232 NRSN2Q9GZP1 204 aa13.92□□□□□ -0.18
RCC1-211ENST00000478232 USP29Q9HBJ7 922 aa13.92□□□□□ -0.18
RCC1-211ENST00000478232 LHX6Q9UPM6 363 aa13.92□□□□□ -0.18
RCC1-211ENST00000478232 RAXQ9Y2V3 346 aa13.92□□□□□ -0.18
RCC1-211ENST00000478232 GPSM3Q9Y4H4 160 aa13.92□□□□□ -0.18
RCC1-211ENST00000478232 TRPM6Q9BX84 2022 aa13.91□□□□□ -0.18
RCC1-211ENST00000478232 DSPP15924 2871 aaKnown RBP13.91□□□□□ -0.18
RCC1-211ENST00000478232 SPEGQ15772 3267 aa13.91□□□□□ -0.18
RCC1-211ENST00000478232 A0A1W2PQJ5 194 aa13.91□□□□□ -0.18
RCC1-211ENST00000478232 TSPAN11A1L157 253 aa13.91□□□□□ -0.18
RCC1-211ENST00000478232 K7ESM1 405 aa13.91□□□□□ -0.18
RCC1-211ENST00000478232 TPP1O14773 563 aa13.91□□□□□ -0.18
RCC1-211ENST00000478232 LRCH4O75427 683 aa13.91□□□□□ -0.18
RCC1-211ENST00000478232 PALMO75781 387 aa13.91□□□□□ -0.18
RCC1-211ENST00000478232 JUNDP17535 347 aa13.91□□□□□ -0.18
RCC1-211ENST00000478232 ITIH2P19823 946 aa13.91□□□□□ -0.18
RCC1-211ENST00000478232 PCK1P35558 622 aa13.91□□□□□ -0.18
RCC1-211ENST00000478232 FANCCQ00597 558 aa13.91□□□□□ -0.18
RCC1-211ENST00000478232 NSUN2Q08J23 767 aaKnown RBP eCLIP13.91□□□□□ -0.18
RCC1-211ENST00000478232 RTP5Q14D33 572 aa13.91□□□□□ -0.18
RCC1-211ENST00000478232 KLHL40Q2TBA0 621 aa13.91□□□□□ -0.18
RCC1-211ENST00000478232 PPP6R3Q5H9R7 873 aaPredicted RBP13.91□□□□□ -0.18
RCC1-211ENST00000478232 CFAP58Q5T655 872 aa13.91□□□□□ -0.18
RCC1-211ENST00000478232 BRAT1Q6PJG6 821 aa13.91□□□□□ -0.18
RCC1-211ENST00000478232 SRLQ86TD4 932 aa13.91□□□□□ -0.18
RCC1-211ENST00000478232 VPS36Q86VN1 386 aa13.91□□□□□ -0.18
RCC1-211ENST00000478232 NXPE2Q96DL1 559 aa13.91□□□□□ -0.18
RCC1-211ENST00000478232 IQCDQ96DY2 449 aa13.91□□□□□ -0.18
RCC1-211ENST00000478232 EXOC2Q96KP1 924 aa13.91□□□□□ -0.18
RCC1-211ENST00000478232 APOLD1Q96LR9 279 aa13.91□□□□□ -0.18
RCC1-211ENST00000478232 PEBP4Q96S96 227 aa13.91□□□□□ -0.18
RCC1-211ENST00000478232 KCTD15Q96SI1 283 aaPredicted RBP13.91□□□□□ -0.18
RCC1-211ENST00000478232 CBX8Q9HC52 389 aa13.91□□□□□ -0.18
RCC1-211ENST00000478232 NCKIPSDQ9NZQ3 722 aa13.91□□□□□ -0.18
RCC1-211ENST00000478232 CWC15Q9P013 229 aaKnown RBP13.91□□□□□ -0.18
RCC1-211ENST00000478232 MYO1AQ9UBC5 1043 aa13.91□□□□□ -0.18
RCC1-211ENST00000478232 CLCA2Q9UQC9 943 aa13.91□□□□□ -0.18
RCC1-211ENST00000478232 GOLGA4Q13439 2230 aaKnown RBP13.91□□□□□ -0.18
RCC1-211ENST00000478232 ARID1BQ8NFD5 2236 aaPredicted RBP13.91□□□□□ -0.18
RCC1-211ENST00000478232 ASPMQ8IZT6 3477 aa13.91□□□□□ -0.18
RCC1-211ENST00000478232 SYCE3A1L190 88 aa13.9□□□□□ -0.18
RCC1-211ENST00000478232 TMEM110-MUSTN1A8MSY1 372 aa13.9□□□□□ -0.18
RCC1-211ENST00000478232 AQP9O43315 295 aa13.9□□□□□ -0.18
RCC1-211ENST00000478232 BUB1BO60566 1050 aaPredicted RBP13.9□□□□□ -0.18
RCC1-211ENST00000478232 GP1BAP07359 652 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 168.5 ms