RNA–Protein interactions for RNA: ENST00000477928.1

SOX2-OT-208, SOX2 overlapping transcript, humanhuman

TSL 2 BASIC

Gene SOX2-OT, Length 902 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-208ENST00000477928 LHX3Q9UBR4 397 aa14□□□□□ -0.17
SOX2-OT-208ENST00000477928 PRAMEF26H0Y7S4 382 aa13.99□□□□□ -0.17
SOX2-OT-208ENST00000477928 TLR4O00206 839 aa13.99□□□□□ -0.17
SOX2-OT-208ENST00000477928 YKT6O15498 198 aa13.99□□□□□ -0.17
SOX2-OT-208ENST00000477928 SDC3O75056 442 aa13.99□□□□□ -0.17
SOX2-OT-208ENST00000477928 KRT37O76014 449 aa13.99□□□□□ -0.17
SOX2-OT-208ENST00000477928 PCDH8O95206 1070 aa13.99□□□□□ -0.17
SOX2-OT-208ENST00000477928 LCA5LO95447 670 aa13.99□□□□□ -0.17
SOX2-OT-208ENST00000477928 UGT2B4P06133 528 aa13.99□□□□□ -0.17
SOX2-OT-208ENST00000477928 HSPA9P38646 679 aaKnown RBP13.99□□□□□ -0.17
SOX2-OT-208ENST00000477928 SLC1A1P43005 524 aa13.99□□□□□ -0.17
SOX2-OT-208ENST00000477928 RGRP47804 291 aa13.99□□□□□ -0.17
SOX2-OT-208ENST00000477928 PAPOLAP51003 745 aaKnown RBP13.99□□□□□ -0.17
SOX2-OT-208ENST00000477928 RHOAP61586 193 aa13.99□□□□□ -0.17
SOX2-OT-208ENST00000477928 SUZ12Q15022 739 aaKnown RBP13.99□□□□□ -0.17
SOX2-OT-208ENST00000477928 ST3GAL2Q16842 350 aa13.99□□□□□ -0.17
SOX2-OT-208ENST00000477928 SMTNL2Q2TAL5 461 aa13.99□□□□□ -0.17
SOX2-OT-208ENST00000477928 TMEM259Q4ZIN3 620 aa13.99□□□□□ -0.17
SOX2-OT-208ENST00000477928 CCDC157Q569K6 752 aa13.99□□□□□ -0.17
SOX2-OT-208ENST00000477928 FBXL19Q6PCT2 694 aa13.99□□□□□ -0.17
SOX2-OT-208ENST00000477928 GCNT7Q6ZNI0 430 aa13.99□□□□□ -0.17
SOX2-OT-208ENST00000477928 HORMAD1Q86X24 394 aa13.99□□□□□ -0.17
SOX2-OT-208ENST00000477928 ARHGAP12Q8IWW6 846 aa13.99□□□□□ -0.17
SOX2-OT-208ENST00000477928 OXR1Q8N573 874 aa13.99□□□□□ -0.17
SOX2-OT-208ENST00000477928 TC2NQ8N9U0 490 aa13.99□□□□□ -0.17
SOX2-OT-208ENST00000477928 MFSD2AQ8NA29 543 aa13.99□□□□□ -0.17
SOX2-OT-208ENST00000477928 TMEM145Q8NBT3 493 aa13.99□□□□□ -0.17
SOX2-OT-208ENST00000477928 ASB12Q8WXK4 309 aa13.99□□□□□ -0.17
SOX2-OT-208ENST00000477928 TSC1Q92574 1164 aa13.99□□□□□ -0.17
SOX2-OT-208ENST00000477928 GATA6Q92908 595 aa13.99□□□□□ -0.17
SOX2-OT-208ENST00000477928 ZNF641Q96N77 438 aaPredicted RBP13.99□□□□□ -0.17
SOX2-OT-208ENST00000477928 CSPG4P5Q96PW8 444 aa13.99□□□□□ -0.17
SOX2-OT-208ENST00000477928 ELF4Q99607 663 aaPredicted RBP13.99□□□□□ -0.17
SOX2-OT-208ENST00000477928 SLC39A8Q9C0K1 460 aa13.99□□□□□ -0.17
SOX2-OT-208ENST00000477928 RBSNQ9H1K0 784 aa13.99□□□□□ -0.17
SOX2-OT-208ENST00000477928 SP110Q9HB58 689 aa13.99□□□□□ -0.17
SOX2-OT-208ENST00000477928 PCDH18Q9HCL0 1135 aa13.99□□□□□ -0.17
SOX2-OT-208ENST00000477928 PCDHB9Q9Y5E1 797 aa13.99□□□□□ -0.17
SOX2-OT-208ENST00000477928 A0A1W2PQ67 120 aa13.98□□□□□ -0.17
SOX2-OT-208ENST00000477928 FLRT2O43155 660 aa13.98□□□□□ -0.17
SOX2-OT-208ENST00000477928 TSPAN6O43657 245 aa13.98□□□□□ -0.17
SOX2-OT-208ENST00000477928 CYLC1P35663 651 aaPredicted RBP13.98□□□□□ -0.17
SOX2-OT-208ENST00000477928 ARSEP51690 589 aa13.98□□□□□ -0.17
SOX2-OT-208ENST00000477928 ZNF75DP51815 510 aa13.98□□□□□ -0.17
SOX2-OT-208ENST00000477928 HADHBP55084 474 aaKnown RBP13.98□□□□□ -0.17
SOX2-OT-208ENST00000477928 RPS21P63220 83 aaKnown RBP13.98□□□□□ -0.17
SOX2-OT-208ENST00000477928 KRT81Q14533 505 aa13.98□□□□□ -0.17
SOX2-OT-208ENST00000477928 CYTH1Q15438 398 aa13.98□□□□□ -0.17
SOX2-OT-208ENST00000477928 RALGPS1Q5JS13 557 aa13.98□□□□□ -0.17
SOX2-OT-208ENST00000477928 TPRG1LQ5T0D9 272 aa13.98□□□□□ -0.17
SOX2-OT-208ENST00000477928 LRRC38Q5VT99 294 aa13.98□□□□□ -0.17
SOX2-OT-208ENST00000477928 UNQ6494/PRO21346Q6UXR6 183 aa13.98□□□□□ -0.17
SOX2-OT-208ENST00000477928 RAB44Q7Z6P3 723 aaPredicted RBP13.98□□□□□ -0.17
SOX2-OT-208ENST00000477928 BBS5Q8N3I7 341 aa13.98□□□□□ -0.17
SOX2-OT-208ENST00000477928 OR13H1Q8NG92 308 aa13.98□□□□□ -0.17
SOX2-OT-208ENST00000477928 SLC35G2Q8TBE7 412 aa13.98□□□□□ -0.17
SOX2-OT-208ENST00000477928 HSPH1Q92598 858 aa13.98□□□□□ -0.17
SOX2-OT-208ENST00000477928 FATE1Q969F0 183 aa13.98□□□□□ -0.17
SOX2-OT-208ENST00000477928 FEM1CQ96JP0 617 aa13.98□□□□□ -0.17
SOX2-OT-208ENST00000477928 NSMCE3Q96MG7 304 aa13.98□□□□□ -0.17
SOX2-OT-208ENST00000477928 KLHL32Q96NJ5 620 aa13.98□□□□□ -0.17
SOX2-OT-208ENST00000477928 ERVMER34-1Q9H9K5 563 aa13.98□□□□□ -0.17
SOX2-OT-208ENST00000477928 ETNK2Q9NVF9 386 aa13.98□□□□□ -0.17
SOX2-OT-208ENST00000477928 HAUS2Q9NVX0 235 aa13.98□□□□□ -0.17
SOX2-OT-208ENST00000477928 FADS3Q9Y5Q0 445 aa13.98□□□□□ -0.17
SOX2-OT-208ENST00000477928 C16orf96A6NNT2 1141 aa13.97□□□□□ -0.17
SOX2-OT-208ENST00000477928 PCDHGA12O60330 932 aa13.97□□□□□ -0.17
SOX2-OT-208ENST00000477928 PALMO75781 387 aa13.97□□□□□ -0.17
SOX2-OT-208ENST00000477928 PIGNO95427 931 aa13.97□□□□□ -0.17
SOX2-OT-208ENST00000477928 PRKCGP05129 697 aa13.97□□□□□ -0.17
SOX2-OT-208ENST00000477928 FECHP22830 423 aa13.97□□□□□ -0.17
SOX2-OT-208ENST00000477928 EPHA8P29322 1005 aaPredicted RBP13.97□□□□□ -0.17
SOX2-OT-208ENST00000477928 CDH6P55285 790 aa13.97□□□□□ -0.17
SOX2-OT-208ENST00000477928 SEMG2Q02383 582 aa13.97□□□□□ -0.17
SOX2-OT-208ENST00000477928 DNAJC3Q13217 504 aa13.97□□□□□ -0.17
SOX2-OT-208ENST00000477928 STAT4Q14765 748 aa13.97□□□□□ -0.17
SOX2-OT-208ENST00000477928 ZNF542PQ5EBM4 170 aa13.97□□□□□ -0.17
SOX2-OT-208ENST00000477928 GDPD4Q6W3E5 623 aa13.97□□□□□ -0.17
SOX2-OT-208ENST00000477928 KANSL1Q7Z3B3 1105 aa13.97□□□□□ -0.17
SOX2-OT-208ENST00000477928 TMTC1Q8IUR5 882 aa13.97□□□□□ -0.17
SOX2-OT-208ENST00000477928 SLC22A18ASQ8N1D0 253 aa13.97□□□□□ -0.17
SOX2-OT-208ENST00000477928 PIP4P2Q8N4L2 257 aa13.97□□□□□ -0.17
SOX2-OT-208ENST00000477928 SAP25Q8TEE9 199 aa13.97□□□□□ -0.17
SOX2-OT-208ENST00000477928 NSMCE1Q8WV22 266 aa13.97□□□□□ -0.17
SOX2-OT-208ENST00000477928 FAF2Q96CS3 445 aa13.97□□□□□ -0.17
SOX2-OT-208ENST00000477928 CINPQ9BW66 212 aaPredicted RBP13.97□□□□□ -0.17
SOX2-OT-208ENST00000477928 PACSIN1Q9BY11 444 aa13.97□□□□□ -0.17
SOX2-OT-208ENST00000477928 GDF3Q9NR23 364 aa13.97□□□□□ -0.17
SOX2-OT-208ENST00000477928 UCKL1Q9NWZ5 548 aa13.97□□□□□ -0.17
SOX2-OT-208ENST00000477928 SEPT3Q9UH03 358 aa13.97□□□□□ -0.17
SOX2-OT-208ENST00000477928 IPO11Q9UI26 975 aaKnown RBP13.97□□□□□ -0.17
SOX2-OT-208ENST00000477928 FREM2Q5SZK8 3169 aa13.97□□□□□ -0.17
SOX2-OT-208ENST00000477928 A0A0A6YYK5 440 aaPredicted RBP13.96□□□□□ -0.17
SOX2-OT-208ENST00000477928 TSPAN11A1L157 253 aa13.96□□□□□ -0.17
SOX2-OT-208ENST00000477928 TTC24A2A3L6 582 aaPredicted RBP13.96□□□□□ -0.17
SOX2-OT-208ENST00000477928 POM121BA6NF01 834 aa13.96□□□□□ -0.17
SOX2-OT-208ENST00000477928 IGLON5A6NGN9 336 aa13.96□□□□□ -0.17
SOX2-OT-208ENST00000477928 TOR1BO14657 336 aa13.96□□□□□ -0.17
SOX2-OT-208ENST00000477928 MUSKO15146 869 aa13.96□□□□□ -0.17
SOX2-OT-208ENST00000477928 IPO7O95373 1038 aaKnown RBP13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms