RNA–Protein interactions for RNA: ENST00000477757.5

PDLIM1-202, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 850 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-202ENST00000477757 C9orf172C9J069 976 aa20.53■□□□□ 0.88
PDLIM1-202ENST00000477757 HSP90AA1P07900 732 aaKnown RBP20.53■□□□□ 0.88
PDLIM1-202ENST00000477757 ALG11Q2TAA5 492 aa20.53■□□□□ 0.88
PDLIM1-202ENST00000477757 ACBD5Q5T8D3 534 aaPredicted RBP20.53■□□□□ 0.88
PDLIM1-202ENST00000477757 TP53I13Q8NBR0 393 aaPredicted RBP20.53■□□□□ 0.88
PDLIM1-202ENST00000477757 ZNF397Q8NF99 534 aaPredicted RBP20.53■□□□□ 0.88
PDLIM1-202ENST00000477757 OR6K2Q8NGY2 324 aa20.53■□□□□ 0.88
PDLIM1-202ENST00000477757 VOPP1Q96AW1 172 aa20.53■□□□□ 0.88
PDLIM1-202ENST00000477757 C1orf74Q96LT6 269 aa20.53■□□□□ 0.88
PDLIM1-202ENST00000477757 EPAS1Q99814 870 aa20.53■□□□□ 0.88
PDLIM1-202ENST00000477757 GTPBP4Q9BZE4 634 aaKnown RBP20.53■□□□□ 0.88
PDLIM1-202ENST00000477757 MBNL1Q9NR56 388 aaKnown RBP20.53■□□□□ 0.88
PDLIM1-202ENST00000477757 CD160O95971 181 aa20.52■□□□□ 0.88
PDLIM1-202ENST00000477757 ERBB2P04626 1255 aa20.52■□□□□ 0.88
PDLIM1-202ENST00000477757 TFE3P19532 575 aaPredicted RBP20.52■□□□□ 0.88
PDLIM1-202ENST00000477757 GKP32189 559 aa20.52■□□□□ 0.88
PDLIM1-202ENST00000477757 SERINC3Q13530 473 aa20.52■□□□□ 0.88
PDLIM1-202ENST00000477757 BORAQ6PGQ7 559 aa20.52■□□□□ 0.88
PDLIM1-202ENST00000477757 PTRH1Q86Y79 214 aaKnown RBP20.52■□□□□ 0.88
PDLIM1-202ENST00000477757 HID1Q8IV36 788 aa20.52■□□□□ 0.88
PDLIM1-202ENST00000477757 SLITRK4Q8IW52 837 aa20.52■□□□□ 0.88
PDLIM1-202ENST00000477757 USP7Q93009 1102 aa20.52■□□□□ 0.88
PDLIM1-202ENST00000477757 PGAP3Q96FM1 320 aaPredicted RBP20.52■□□□□ 0.88
PDLIM1-202ENST00000477757 CMKLR1Q99788 373 aa20.52■□□□□ 0.88
PDLIM1-202ENST00000477757 B3GNT4Q9C0J1 378 aa20.52■□□□□ 0.88
PDLIM1-202ENST00000477757 UBE2TQ9NPD8 197 aaPredicted RBP20.52■□□□□ 0.88
PDLIM1-202ENST00000477757 APPL1Q9UKG1 709 aa20.52■□□□□ 0.88
PDLIM1-202ENST00000477757 PAXBP1Q9Y5B6 917 aa20.52■□□□□ 0.88
PDLIM1-202ENST00000477757 DOCK4Q8N1I0 1966 aa20.52■□□□□ 0.87
PDLIM1-202ENST00000477757 PSMA7O14818 248 aa20.51■□□□□ 0.87
PDLIM1-202ENST00000477757 TM7SF2O76062 418 aa20.51■□□□□ 0.87
PDLIM1-202ENST00000477757 RASGRP1O95267 797 aa20.51■□□□□ 0.87
PDLIM1-202ENST00000477757 UGT2B4P06133 528 aa20.51■□□□□ 0.87
PDLIM1-202ENST00000477757 CTSEP14091 401 aa20.51■□□□□ 0.87
PDLIM1-202ENST00000477757 PEX5P50542 639 aa20.51■□□□□ 0.87
PDLIM1-202ENST00000477757 SLC6A3Q01959 620 aa20.51■□□□□ 0.87
PDLIM1-202ENST00000477757 GNA12Q03113 381 aa20.51■□□□□ 0.87
PDLIM1-202ENST00000477757 KCNAB2Q13303 367 aa20.51■□□□□ 0.87
PDLIM1-202ENST00000477757 IRF4Q15306 451 aa20.51■□□□□ 0.87
PDLIM1-202ENST00000477757 TCEA2Q15560 299 aa20.51■□□□□ 0.87
PDLIM1-202ENST00000477757 SKIDA1Q1XH10 827 aa20.51■□□□□ 0.87
PDLIM1-202ENST00000477757 ENOSF1Q7L5Y1 443 aa20.51■□□□□ 0.87
PDLIM1-202ENST00000477757 GKN2Q86XP6 184 aa20.51■□□□□ 0.87
PDLIM1-202ENST00000477757 PASD1Q8IV76 773 aa20.51■□□□□ 0.87
PDLIM1-202ENST00000477757 RYBPQ8N488 228 aaPredicted RBP20.51■□□□□ 0.87
PDLIM1-202ENST00000477757 GPR156Q8NFN8 814 aa20.51■□□□□ 0.87
PDLIM1-202ENST00000477757 SPATA20Q8TB22 786 aa20.51■□□□□ 0.87
PDLIM1-202ENST00000477757 NT5C3BQ969T7 300 aa20.51■□□□□ 0.87
PDLIM1-202ENST00000477757 SLC12A9Q9BXP2 914 aa20.51■□□□□ 0.87
PDLIM1-202ENST00000477757 OSBPL1AQ9BXW6 950 aa20.51■□□□□ 0.87
PDLIM1-202ENST00000477757 TMPRSS4Q9NRS4 437 aa20.51■□□□□ 0.87
PDLIM1-202ENST00000477757 TUBD1Q9UJT1 453 aa20.51■□□□□ 0.87
PDLIM1-202ENST00000477757 STAP1Q9ULZ2 295 aa20.51■□□□□ 0.87
PDLIM1-202ENST00000477757 PCDHGC3Q9UN70 934 aa20.51■□□□□ 0.87
PDLIM1-202ENST00000477757 MAN2B2Q9Y2E5 1009 aa20.51■□□□□ 0.87
PDLIM1-202ENST00000477757 ACTL7AQ9Y615 435 aa20.51■□□□□ 0.87
PDLIM1-202ENST00000477757 BECN2A8MW95 431 aa20.5■□□□□ 0.87
PDLIM1-202ENST00000477757 KRIT1O00522 736 aa20.5■□□□□ 0.87
PDLIM1-202ENST00000477757 MMP20O60882 483 aa20.5■□□□□ 0.87
PDLIM1-202ENST00000477757 GSRP00390 522 aa20.5■□□□□ 0.87
PDLIM1-202ENST00000477757 CASRP41180 1078 aa20.5■□□□□ 0.87
PDLIM1-202ENST00000477757 SULT1E1P49888 294 aa20.5■□□□□ 0.87
PDLIM1-202ENST00000477757 MAPK10P53779 464 aa20.5■□□□□ 0.87
PDLIM1-202ENST00000477757 POLE2P56282 527 aa20.5■□□□□ 0.87
PDLIM1-202ENST00000477757 CERCAMQ5T4B2 595 aa20.5■□□□□ 0.87
PDLIM1-202ENST00000477757 SPRED1Q7Z699 444 aa20.5■□□□□ 0.87
PDLIM1-202ENST00000477757 TRIM59Q8IWR1 403 aa20.5■□□□□ 0.87
PDLIM1-202ENST00000477757 C1orf131Q8NDD1 294 aaKnown RBP20.5■□□□□ 0.87
PDLIM1-202ENST00000477757 TSACCQ96A04 125 aaPredicted RBP20.5■□□□□ 0.87
PDLIM1-202ENST00000477757 TMEM110-MUSTN1A8MSY1 372 aa20.49■□□□□ 0.87
PDLIM1-202ENST00000477757 F9P00740 461 aa20.49■□□□□ 0.87
PDLIM1-202ENST00000477757 PNLIPP16233 465 aa20.49■□□□□ 0.87
PDLIM1-202ENST00000477757 GLB1P16278 677 aa20.49■□□□□ 0.87
PDLIM1-202ENST00000477757 NFATC4Q14934 902 aa20.49■□□□□ 0.87
PDLIM1-202ENST00000477757 KLHL40Q2TBA0 621 aa20.49■□□□□ 0.87
PDLIM1-202ENST00000477757 PTPN20Q4JDL3 420 aa20.49■□□□□ 0.87
PDLIM1-202ENST00000477757 LRRC73Q5JTD7 316 aa20.49■□□□□ 0.87
PDLIM1-202ENST00000477757 DRC7Q8IY82 874 aa20.49■□□□□ 0.87
PDLIM1-202ENST00000477757 Q8N9G6 341 aaPredicted RBP20.49■□□□□ 0.87
PDLIM1-202ENST00000477757 OR2AP1Q8NGE2 309 aa20.49■□□□□ 0.87
PDLIM1-202ENST00000477757 CXorf40AQ8TE69 158 aa20.49■□□□□ 0.87
PDLIM1-202ENST00000477757 ARHGEF2Q92974 986 aaKnown RBP20.49■□□□□ 0.87
PDLIM1-202ENST00000477757 DHTKD1Q96HY7 919 aaPredicted RBP20.49■□□□□ 0.87
PDLIM1-202ENST00000477757 KLHL32Q96NJ5 620 aa20.49■□□□□ 0.87
PDLIM1-202ENST00000477757 ZYG11BQ9C0D3 744 aa20.49■□□□□ 0.87
PDLIM1-202ENST00000477757 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP20.49■□□□□ 0.87
PDLIM1-202ENST00000477757 ANAPC2Q9UJX6 822 aa20.49■□□□□ 0.87
PDLIM1-202ENST00000477757 RNF215Q9Y6U7 377 aa20.49■□□□□ 0.87
PDLIM1-202ENST00000477757 UNC13CQ8NB66 2214 aa20.48■□□□□ 0.87
PDLIM1-202ENST00000477757 STMND1H3BQB6 276 aa20.48■□□□□ 0.87
PDLIM1-202ENST00000477757 AGRPO00253 132 aa20.48■□□□□ 0.87
PDLIM1-202ENST00000477757 SRGAP2O75044 1071 aa20.48■□□□□ 0.87
PDLIM1-202ENST00000477757 SMC2O95347 1197 aa20.48■□□□□ 0.87
PDLIM1-202ENST00000477757 HTR1BP28222 390 aa20.48■□□□□ 0.87
PDLIM1-202ENST00000477757 GEMIN4P57678 1058 aaKnown RBP20.48■□□□□ 0.87
PDLIM1-202ENST00000477757 SNX16P57768 344 aa20.48■□□□□ 0.87
PDLIM1-202ENST00000477757 DEUP1Q05D60 604 aa20.48■□□□□ 0.87
PDLIM1-202ENST00000477757 STIM1Q13586 685 aa20.48■□□□□ 0.87
PDLIM1-202ENST00000477757 POLD3Q15054 466 aaPredicted RBP20.48■□□□□ 0.87
PDLIM1-202ENST00000477757 IGFBP7Q16270 282 aa20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms