RNA–Protein interactions for RNA: ENST00000477288.5

VARS2-209, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 6,054 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-209ENST00000477288 ZFRQ96KR1 1074 aaKnown RBP18.72■□□□□ 0.59
VARS2-209ENST00000477288 TMEM134Q9H6X4 195 aa18.72■□□□□ 0.59
VARS2-209ENST00000477288 ZSCAN5CA6NGD5 496 aaPredicted RBP18.72■□□□□ 0.59
VARS2-209ENST00000477288 H0Y858 1186 aa18.72■□□□□ 0.59
VARS2-209ENST00000477288 PDE2AO00408 941 aaPredicted RBP18.72■□□□□ 0.59
VARS2-209ENST00000477288 SCN2BO60939 215 aa18.72■□□□□ 0.59
VARS2-209ENST00000477288 HOXB8P17481 243 aaPredicted RBP18.72■□□□□ 0.59
VARS2-209ENST00000477288 ADSLP30566 484 aaPredicted RBP18.72■□□□□ 0.59
VARS2-209ENST00000477288 CD52P31358 61 aa18.72■□□□□ 0.59
VARS2-209ENST00000477288 CDKAL1Q5VV42 579 aa18.72■□□□□ 0.59
VARS2-209ENST00000477288 MZT2BQ6NZ67 158 aa18.72■□□□□ 0.59
VARS2-209ENST00000477288 NKAPQ8N5F7 415 aaKnown RBP18.72■□□□□ 0.59
VARS2-209ENST00000477288 TMPRSS4Q9NRS4 437 aa18.72■□□□□ 0.59
VARS2-209ENST00000477288 C15orf38-AP3S2A0A0A6YYH1 394 aa18.71■□□□□ 0.59
VARS2-209ENST00000477288 URADA6NGE7 173 aa18.71■□□□□ 0.59
VARS2-209ENST00000477288 SSNA1O43805 119 aa18.71■□□□□ 0.59
VARS2-209ENST00000477288 CCDC166P0CW27 439 aa18.71■□□□□ 0.59
VARS2-209ENST00000477288 GCNT7Q6ZNI0 430 aa18.71■□□□□ 0.59
VARS2-209ENST00000477288 ARPINQ7Z6K5 226 aa18.71■□□□□ 0.59
VARS2-209ENST00000477288 UNC93AQ86WB7 457 aa18.71■□□□□ 0.59
VARS2-209ENST00000477288 HMG20AQ9NP66 347 aa18.71■□□□□ 0.59
VARS2-209ENST00000477288 FTH1P02794 183 aa18.71■□□□□ 0.59
VARS2-209ENST00000477288 ZSCAN5DPP0CG00 497 aa18.71■□□□□ 0.59
VARS2-209ENST00000477288 CDK16Q00536 496 aa18.71■□□□□ 0.59
VARS2-209ENST00000477288 CAVIN3Q969G5 261 aa18.71■□□□□ 0.59
VARS2-209ENST00000477288 TMEM51Q9NW97 253 aa18.71■□□□□ 0.59
VARS2-209ENST00000477288 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.71■□□□□ 0.59
VARS2-209ENST00000477288 DYTNA2CJ06 578 aa18.71■□□□□ 0.59
VARS2-209ENST00000477288 KPNA5O15131 536 aa18.71■□□□□ 0.59
VARS2-209ENST00000477288 SPATA31D3P0C874 917 aa18.71■□□□□ 0.59
VARS2-209ENST00000477288 SPIRE1Q08AE8 756 aa18.71■□□□□ 0.59
VARS2-209ENST00000477288 SPATA31D4Q6ZUB0 917 aa18.71■□□□□ 0.59
VARS2-209ENST00000477288 NAT16Q8N8M0 369 aa18.71■□□□□ 0.59
VARS2-209ENST00000477288 FTHL17Q9BXU8 183 aa18.71■□□□□ 0.59
VARS2-209ENST00000477288 VWDEQ8N2E2 1590 aa18.71■□□□□ 0.59
VARS2-209ENST00000477288 TCRBV5S4A2TA0A5A2 114 aa18.71■□□□□ 0.59
VARS2-209ENST00000477288 FARP2O94887 1054 aaPredicted RBP18.71■□□□□ 0.59
VARS2-209ENST00000477288 CXCL14O95715 111 aa18.71■□□□□ 0.59
VARS2-209ENST00000477288 USP46P62068 366 aa18.71■□□□□ 0.59
VARS2-209ENST00000477288 PSMD5Q16401 504 aa18.71■□□□□ 0.59
VARS2-209ENST00000477288 XKR6Q5GH73 641 aa18.71■□□□□ 0.59
VARS2-209ENST00000477288 APOBEC3HQ6NTF7 200 aaKnown RBP18.71■□□□□ 0.59
VARS2-209ENST00000477288 HJURPQ8NCD3 748 aaPredicted RBP18.71■□□□□ 0.59
VARS2-209ENST00000477288 GPR152Q8TDT2 470 aa18.71■□□□□ 0.59
VARS2-209ENST00000477288 MCRS1Q96EZ8 462 aa18.71■□□□□ 0.59
VARS2-209ENST00000477288 NRDE2Q9H7Z3 1164 aa18.71■□□□□ 0.59
VARS2-209ENST00000477288 ZNF222Q9UK12 451 aa18.71■□□□□ 0.59
VARS2-209ENST00000477288 MAP2P11137 1827 aaKnown RBP18.71■□□□□ 0.59
VARS2-209ENST00000477288 ERCC2P18074 760 aa18.71■□□□□ 0.59
VARS2-209ENST00000477288 KLHL12Q53G59 568 aa18.71■□□□□ 0.59
VARS2-209ENST00000477288 PYDC2Q56P42 97 aa18.71■□□□□ 0.59
VARS2-209ENST00000477288 FAM46CQ5VWP2 391 aa18.71■□□□□ 0.59
VARS2-209ENST00000477288 PLPP4Q5VZY2 271 aa18.71■□□□□ 0.59
VARS2-209ENST00000477288 PTGR2Q8N8N7 351 aaPredicted RBP18.71■□□□□ 0.59
VARS2-209ENST00000477288 NDNQ99608 321 aa18.71■□□□□ 0.59
VARS2-209ENST00000477288 CRISPLD1Q9H336 500 aa18.71■□□□□ 0.59
VARS2-209ENST00000477288 PHF11Q9UIL8 331 aa18.71■□□□□ 0.59
VARS2-209ENST00000477288 NWD1Q149M9 1564 aa18.71■□□□□ 0.59
VARS2-209ENST00000477288 BCL9O00512 1426 aa18.71■□□□□ 0.58
VARS2-209ENST00000477288 CCNB1P14635 433 aa18.7■□□□□ 0.58
VARS2-209ENST00000477288 MAPK8P45983 427 aa18.7■□□□□ 0.58
VARS2-209ENST00000477288 DLG4P78352 724 aa18.7■□□□□ 0.58
VARS2-209ENST00000477288 ITGADQ13349 1161 aa18.7■□□□□ 0.58
VARS2-209ENST00000477288 GPR142Q7Z601 462 aa18.7■□□□□ 0.58
VARS2-209ENST00000477288 HPS6Q86YV9 775 aa18.7■□□□□ 0.58
VARS2-209ENST00000477288 LEMD2Q8NC56 503 aa18.7■□□□□ 0.58
VARS2-209ENST00000477288 KAT5Q92993 513 aa18.7■□□□□ 0.58
VARS2-209ENST00000477288 QKIQ96PU8 341 aaKnown RBP eCLIP18.7■□□□□ 0.58
VARS2-209ENST00000477288 KLF15Q9UIH9 416 aa18.7■□□□□ 0.58
VARS2-209ENST00000477288 TNS2Q63HR2 1409 aa18.7■□□□□ 0.58
VARS2-209ENST00000477288 DDX3XO00571 662 aaKnown RBP eCLIP18.7■□□□□ 0.58
VARS2-209ENST00000477288 LIN7AO14910 233 aaPredicted RBP18.7■□□□□ 0.58
VARS2-209ENST00000477288 TSPAN8P19075 237 aa18.7■□□□□ 0.58
VARS2-209ENST00000477288 EARS2Q5JPH6 523 aaKnown RBP18.7■□□□□ 0.58
VARS2-209ENST00000477288 TSHZ1Q6ZSZ6 1077 aa18.7■□□□□ 0.58
VARS2-209ENST00000477288 SLC35C1Q96A29 364 aa18.7■□□□□ 0.58
VARS2-209ENST00000477288 AGXT2Q9BYV1 514 aa18.7■□□□□ 0.58
VARS2-209ENST00000477288 BTBD7Q9P203 1132 aa18.7■□□□□ 0.58
VARS2-209ENST00000477288 IKZF3Q9UKT9 509 aa18.7■□□□□ 0.58
VARS2-209ENST00000477288 OGDHLQ9ULD0 1010 aa18.7■□□□□ 0.58
VARS2-209ENST00000477288 ANGPT4Q9Y264 503 aa18.7■□□□□ 0.58
VARS2-209ENST00000477288 BTRCQ9Y297 605 aa18.7■□□□□ 0.58
VARS2-209ENST00000477288 MCIDASD6RGH6 385 aa18.7■□□□□ 0.58
VARS2-209ENST00000477288 IRF6O14896 467 aa18.7■□□□□ 0.58
VARS2-209ENST00000477288 OMPP47874 163 aa18.7■□□□□ 0.58
VARS2-209ENST00000477288 EXOC2Q96KP1 924 aa18.7■□□□□ 0.58
VARS2-209ENST00000477288 HTATIP2Q9BUP3 242 aa18.7■□□□□ 0.58
VARS2-209ENST00000477288 NEUROD4Q9HD90 331 aa18.7■□□□□ 0.58
VARS2-209ENST00000477288 SLC15A5A6NIM6 579 aa18.7■□□□□ 0.58
VARS2-209ENST00000477288 LSM3P62310 102 aaKnown RBP18.7■□□□□ 0.58
VARS2-209ENST00000477288 SCIMPQ6UWF3 145 aa18.7■□□□□ 0.58
VARS2-209ENST00000477288 SLC38A2Q96QD8 506 aa18.7■□□□□ 0.58
VARS2-209ENST00000477288 PCDHA11Q9Y5I1 949 aa18.7■□□□□ 0.58
VARS2-209ENST00000477288 FAM25EA8MYX2 175 aa18.7■□□□□ 0.58
VARS2-209ENST00000477288 RECQL5O94762 991 aaPredicted RBP18.7■□□□□ 0.58
VARS2-209ENST00000477288 PRKAR2AP13861 404 aaKnown RBP18.7■□□□□ 0.58
VARS2-209ENST00000477288 GLRA2P23416 452 aa18.7■□□□□ 0.58
VARS2-209ENST00000477288 CYP2C18P33260 490 aa18.7■□□□□ 0.58
VARS2-209ENST00000477288 NTRK3Q16288 839 aa18.7■□□□□ 0.58
VARS2-209ENST00000477288 IQCF2Q8IXL9 164 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms