RNA–Protein interactions for RNA: ENST00000476395.1

VAPB-205, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-205ENST00000476395 HDCP19113 662 aa8.47□□□□□ -1.05
VAPB-205ENST00000476395 CD68P34810 354 aaPredicted RBP8.47□□□□□ -1.05
VAPB-205ENST00000476395 PPARGP37231 505 aaPredicted RBP8.47□□□□□ -1.05
VAPB-205ENST00000476395 TUFMP49411 452 aaKnown RBP8.47□□□□□ -1.05
VAPB-205ENST00000476395 NUP107P57740 925 aa8.47□□□□□ -1.05
VAPB-205ENST00000476395 POU5F1BQ06416 359 aa8.47□□□□□ -1.05
VAPB-205ENST00000476395 DPYSQ14117 519 aa8.47□□□□□ -1.05
VAPB-205ENST00000476395 IKBKEQ14164 716 aa8.47□□□□□ -1.05
VAPB-205ENST00000476395 TBCCQ15814 346 aa8.47□□□□□ -1.05
VAPB-205ENST00000476395 NEDD8Q15843 81 aa8.47□□□□□ -1.05
VAPB-205ENST00000476395 PGS1Q32NB8 556 aa8.47□□□□□ -1.05
VAPB-205ENST00000476395 DEPDC1Q5TB30 811 aa8.47□□□□□ -1.05
VAPB-205ENST00000476395 ANKRD26P1Q6NSI1 321 aa8.47□□□□□ -1.05
VAPB-205ENST00000476395 NEPROQ6NW34 567 aa8.47□□□□□ -1.05
VAPB-205ENST00000476395 SLC26A9Q7LBE3 791 aa8.47□□□□□ -1.05
VAPB-205ENST00000476395 LSMEM2Q8N112 164 aa8.47□□□□□ -1.05
VAPB-205ENST00000476395 ZNF567Q8N184 647 aa8.47□□□□□ -1.05
VAPB-205ENST00000476395 ACMSDQ8TDX5 336 aa8.47□□□□□ -1.05
VAPB-205ENST00000476395 DEPDC1BQ8WUY9 529 aa8.47□□□□□ -1.05
VAPB-205ENST00000476395 HTR3CQ8WXA8 447 aa8.47□□□□□ -1.05
VAPB-205ENST00000476395 P2RY11Q96G91 374 aa8.47□□□□□ -1.05
VAPB-205ENST00000476395 NSMCE3Q96MG7 304 aa8.47□□□□□ -1.05
VAPB-205ENST00000476395 SPATA13Q96N96 652 aa8.47□□□□□ -1.05
VAPB-205ENST00000476395 NPAS2Q99743 824 aa8.47□□□□□ -1.05
VAPB-205ENST00000476395 NT5C1AQ9BXI3 368 aa8.47□□□□□ -1.05
VAPB-205ENST00000476395 KATNBL1Q9H079 304 aa8.47□□□□□ -1.05
VAPB-205ENST00000476395 SEPT10Q9P0V9 454 aa8.47□□□□□ -1.05
VAPB-205ENST00000476395 THEGQ9P2T0 379 aa8.47□□□□□ -1.05
VAPB-205ENST00000476395 AP4E1Q9UPM8 1137 aa8.47□□□□□ -1.05
VAPB-205ENST00000476395 MYRFQ9Y2G1 1151 aa8.47□□□□□ -1.05
VAPB-205ENST00000476395 SNX13Q9Y5W8 968 aa8.47□□□□□ -1.05
VAPB-205ENST00000476395 SGTAO43765 313 aa8.47□□□□□ -1.05
VAPB-205ENST00000476395 MLNP12872 115 aa8.47□□□□□ -1.05
VAPB-205ENST00000476395 INSRRP14616 1297 aa8.47□□□□□ -1.05
VAPB-205ENST00000476395 PSMB4P28070 264 aa8.47□□□□□ -1.05
VAPB-205ENST00000476395 HMOX2P30519 316 aa8.47□□□□□ -1.05
VAPB-205ENST00000476395 TMEM132DQ14C87 1099 aa8.47□□□□□ -1.05
VAPB-205ENST00000476395 ZNF829Q3KNS6 432 aaPredicted RBP8.47□□□□□ -1.05
VAPB-205ENST00000476395 DCAF15Q66K64 600 aa8.47□□□□□ -1.05
VAPB-205ENST00000476395 PAQR9Q6ZVX9 377 aa8.47□□□□□ -1.05
VAPB-205ENST00000476395 IGFN1Q86VF2 1251 aa8.47□□□□□ -1.05
VAPB-205ENST00000476395 BORCS5Q969J3 196 aa8.47□□□□□ -1.05
VAPB-205ENST00000476395 SPATA33Q96N06 139 aa8.47□□□□□ -1.05
VAPB-205ENST00000476395 C16orf70Q9BSU1 422 aa8.47□□□□□ -1.05
VAPB-205ENST00000476395 OSBPL11Q9BXB4 747 aa8.47□□□□□ -1.05
VAPB-205ENST00000476395 STN1Q9H668 368 aaKnown RBP8.47□□□□□ -1.05
VAPB-205ENST00000476395 NOL11Q9H8H0 719 aaKnown RBP8.47□□□□□ -1.05
VAPB-205ENST00000476395 CAB39LQ9H9S4 337 aa8.47□□□□□ -1.05
VAPB-205ENST00000476395 CXorf21Q9HAI6 301 aa8.47□□□□□ -1.05
VAPB-205ENST00000476395 EIF2B3Q9NR50 452 aaKnown RBP8.47□□□□□ -1.05
VAPB-205ENST00000476395 SNX15Q9NRS6 342 aa8.47□□□□□ -1.05
VAPB-205ENST00000476395 FAM149AA5PLN7 773 aa8.47□□□□□ -1.05
VAPB-205ENST00000476395 SOCS2O14508 198 aa8.47□□□□□ -1.05
VAPB-205ENST00000476395 KLHL2O95198 593 aa8.47□□□□□ -1.05
VAPB-205ENST00000476395 SERPINE1P05121 402 aa8.47□□□□□ -1.05
VAPB-205ENST00000476395 IDUAP35475 653 aa8.47□□□□□ -1.05
VAPB-205ENST00000476395 ABCE1P61221 599 aaKnown RBP8.47□□□□□ -1.05
VAPB-205ENST00000476395 PHKG1Q16816 387 aa8.47□□□□□ -1.05
VAPB-205ENST00000476395 PIGGQ5H8A4 983 aa8.47□□□□□ -1.05
VAPB-205ENST00000476395 FAM209AQ5JX71 171 aa8.47□□□□□ -1.05
VAPB-205ENST00000476395 TSTD2Q5T7W7 516 aa8.47□□□□□ -1.05
VAPB-205ENST00000476395 KIAA0319Q5VV43 1072 aa8.47□□□□□ -1.05
VAPB-205ENST00000476395 TAPT1Q6NXT6 567 aa8.47□□□□□ -1.05
VAPB-205ENST00000476395 PIWIL3Q7Z3Z3 882 aaKnown RBP8.47□□□□□ -1.05
VAPB-205ENST00000476395 PCDH20Q8N6Y1 951 aaKnown RBP8.47□□□□□ -1.05
VAPB-205ENST00000476395 NPWQ8N729 165 aa8.47□□□□□ -1.05
VAPB-205ENST00000476395 COLGALT1Q8NBJ5 622 aa8.47□□□□□ -1.05
VAPB-205ENST00000476395 CHPT1Q8WUD6 406 aa8.47□□□□□ -1.05
VAPB-205ENST00000476395 GFM2Q969S9 779 aaKnown RBP8.47□□□□□ -1.05
VAPB-205ENST00000476395 CMTM5Q96DZ9 223 aa8.47□□□□□ -1.05
VAPB-205ENST00000476395 FEM1CQ96JP0 617 aa8.47□□□□□ -1.05
VAPB-205ENST00000476395 RPL10LQ96L21 214 aaKnown RBP8.47□□□□□ -1.05
VAPB-205ENST00000476395 KCNK16Q96T55 309 aa8.47□□□□□ -1.05
VAPB-205ENST00000476395 SYT17Q9BSW7 474 aa8.47□□□□□ -1.05
VAPB-205ENST00000476395 MLPHQ9BV36 600 aaPredicted RBP8.47□□□□□ -1.05
VAPB-205ENST00000476395 TRPV6Q9H1D0 765 aa8.47□□□□□ -1.05
VAPB-205ENST00000476395 CDHR5Q9HBB8 845 aa8.47□□□□□ -1.05
VAPB-205ENST00000476395 TMEM30AQ9NV96 361 aa8.47□□□□□ -1.05
VAPB-205ENST00000476395 PCDHB12Q9Y5F1 795 aa8.47□□□□□ -1.05
VAPB-205ENST00000476395 DGKBQ9Y6T7 804 aa8.47□□□□□ -1.05
VAPB-205ENST00000476395 PATJQ8NI35 1801 aa8.46□□□□□ -1.05
VAPB-205ENST00000476395 NUP205Q92621 2012 aa8.46□□□□□ -1.05
VAPB-205ENST00000476395 DCLK1O15075 740 aa8.46□□□□□ -1.05
VAPB-205ENST00000476395 AXIN1O15169 862 aa8.46□□□□□ -1.05
VAPB-205ENST00000476395 GRID2O43424 1007 aa8.46□□□□□ -1.05
VAPB-205ENST00000476395 CNOT3O75175 753 aaKnown RBP8.46□□□□□ -1.05
VAPB-205ENST00000476395 CHRNGP07510 517 aa8.46□□□□□ -1.05
VAPB-205ENST00000476395 NCAM1P13591 858 aa8.46□□□□□ -1.05
VAPB-205ENST00000476395 IREB2P48200 963 aaKnown RBP8.46□□□□□ -1.05
VAPB-205ENST00000476395 GLUD2P49448 558 aa8.46□□□□□ -1.05
VAPB-205ENST00000476395 SERPINB9P50453 376 aa8.46□□□□□ -1.05
VAPB-205ENST00000476395 SEMA3BQ13214 749 aa8.46□□□□□ -1.05
VAPB-205ENST00000476395 PITRM1Q5JRX3 1037 aa8.46□□□□□ -1.05
VAPB-205ENST00000476395 ARHGAP17Q68EM7 881 aa8.46□□□□□ -1.05
VAPB-205ENST00000476395 RNF19BQ6ZMZ0 732 aa8.46□□□□□ -1.05
VAPB-205ENST00000476395 TMEM135Q86UB9 458 aa8.46□□□□□ -1.05
VAPB-205ENST00000476395 CDKL3Q8IVW4 592 aaPredicted RBP8.46□□□□□ -1.05
VAPB-205ENST00000476395 CLIP4Q8N3C7 705 aa8.46□□□□□ -1.05
VAPB-205ENST00000476395 ADCY4Q8NFM4 1077 aa8.46□□□□□ -1.05
VAPB-205ENST00000476395 SGCDQ92629 289 aa8.46□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms