RNA–Protein interactions for RNA: ENST00000475319.1

ECHDC1-215, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 1,543 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-215ENST00000475319 SPAG1Q07617 926 aa6.06□□□□□ -1.44
ECHDC1-215ENST00000475319 SNTA1Q13424 505 aa6.06□□□□□ -1.44
ECHDC1-215ENST00000475319 ATP1A4Q13733 1029 aa6.06□□□□□ -1.44
ECHDC1-215ENST00000475319 SELPLGQ14242 412 aa6.06□□□□□ -1.44
ECHDC1-215ENST00000475319 KRT32Q14532 448 aa6.06□□□□□ -1.44
ECHDC1-215ENST00000475319 SGCAQ16586 387 aa6.06□□□□□ -1.44
ECHDC1-215ENST00000475319 CEP55Q53EZ4 464 aa6.06□□□□□ -1.44
ECHDC1-215ENST00000475319 EARS2Q5JPH6 523 aaKnown RBP6.06□□□□□ -1.44
ECHDC1-215ENST00000475319 TCTE1Q5JU00 501 aa6.06□□□□□ -1.44
ECHDC1-215ENST00000475319 BRMS1LQ5PSV4 323 aa6.06□□□□□ -1.44
ECHDC1-215ENST00000475319 IFIT1BQ5T764 474 aaKnown RBP6.06□□□□□ -1.44
ECHDC1-215ENST00000475319 MBLAC2Q68D91 279 aa6.06□□□□□ -1.44
ECHDC1-215ENST00000475319 TMEM132EQ6IEE7 984 aa6.06□□□□□ -1.44
ECHDC1-215ENST00000475319 AAGABQ6PD74 315 aa6.06□□□□□ -1.44
ECHDC1-215ENST00000475319 SYCE2Q6PIF2 218 aa6.06□□□□□ -1.44
ECHDC1-215ENST00000475319 B3GNT9Q6UX72 402 aa6.06□□□□□ -1.44
ECHDC1-215ENST00000475319 C16orf59Q7L2K0 433 aa6.06□□□□□ -1.44
ECHDC1-215ENST00000475319 OTOP1Q7RTM1 612 aa6.06□□□□□ -1.44
ECHDC1-215ENST00000475319 HAUS6Q7Z4H7 955 aa6.06□□□□□ -1.44
ECHDC1-215ENST00000475319 SETD3Q86TU7 594 aaPredicted RBP6.06□□□□□ -1.44
ECHDC1-215ENST00000475319 ZNF589Q86UQ0 364 aaPredicted RBP6.06□□□□□ -1.44
ECHDC1-215ENST00000475319 VSIG1Q86XK7 387 aa6.06□□□□□ -1.44
ECHDC1-215ENST00000475319 MARVELD2Q8N4S9 558 aa6.06□□□□□ -1.44
ECHDC1-215ENST00000475319 DPP10Q8N608 796 aa6.06□□□□□ -1.44
ECHDC1-215ENST00000475319 FITM2Q8N6M3 262 aa6.06□□□□□ -1.44
ECHDC1-215ENST00000475319 PIK3C3Q8NEB9 887 aa6.06□□□□□ -1.44
ECHDC1-215ENST00000475319 SPATA4Q8NEY3 305 aa6.06□□□□□ -1.44
ECHDC1-215ENST00000475319 IPMKQ8NFU5 416 aa6.06□□□□□ -1.44
ECHDC1-215ENST00000475319 PPP4R1Q8TF05 950 aa6.06□□□□□ -1.44
ECHDC1-215ENST00000475319 LPGAT1Q92604 370 aa6.06□□□□□ -1.44
ECHDC1-215ENST00000475319 MAGOHBQ96A72 148 aaKnown RBP6.06□□□□□ -1.44
ECHDC1-215ENST00000475319 EDC3Q96F86 508 aaKnown RBP6.06□□□□□ -1.44
ECHDC1-215ENST00000475319 PGM2Q96G03 612 aa6.06□□□□□ -1.44
ECHDC1-215ENST00000475319 TMEM80Q96HE8 168 aa6.06□□□□□ -1.44
ECHDC1-215ENST00000475319 TXNDC15Q96J42 360 aa6.06□□□□□ -1.44
ECHDC1-215ENST00000475319 TEKT5Q96M29 485 aa6.06□□□□□ -1.44
ECHDC1-215ENST00000475319 PLIN2Q99541 437 aa6.06□□□□□ -1.44
ECHDC1-215ENST00000475319 LLPHQ9BRT6 129 aaKnown RBP6.06□□□□□ -1.44
ECHDC1-215ENST00000475319 LRRC1Q9BTT6 524 aa6.06□□□□□ -1.44
ECHDC1-215ENST00000475319 ZSCAN5AQ9BUG6 496 aa6.06□□□□□ -1.44
ECHDC1-215ENST00000475319 TBC1D10AQ9BXI6 508 aa6.06□□□□□ -1.44
ECHDC1-215ENST00000475319 ZNF341Q9BYN7 854 aa6.06□□□□□ -1.44
ECHDC1-215ENST00000475319 TM6SF1Q9BZW5 370 aa6.06□□□□□ -1.44
ECHDC1-215ENST00000475319 SENP6Q9GZR1 1112 aaPredicted RBP6.06□□□□□ -1.44
ECHDC1-215ENST00000475319 PAIP1Q9H074 479 aaKnown RBP6.06□□□□□ -1.44
ECHDC1-215ENST00000475319 NAPBQ9H115 298 aa6.06□□□□□ -1.44
ECHDC1-215ENST00000475319 SLC6A15Q9H2J7 730 aa6.06□□□□□ -1.44
ECHDC1-215ENST00000475319 TFB2MQ9H5Q4 396 aaKnown RBP6.06□□□□□ -1.44
ECHDC1-215ENST00000475319 C14orf93Q9H972 538 aaKnown RBP6.06□□□□□ -1.44
ECHDC1-215ENST00000475319 SAR1AQ9NR31 198 aa6.06□□□□□ -1.44
ECHDC1-215ENST00000475319 NDE1Q9NXR1 346 aa6.06□□□□□ -1.44
ECHDC1-215ENST00000475319 CNOT8Q9UFF9 292 aaKnown RBP6.06□□□□□ -1.44
ECHDC1-215ENST00000475319 CYB5R1Q9UHQ9 305 aa6.06□□□□□ -1.44
ECHDC1-215ENST00000475319 TINAGQ9UJW2 476 aa6.06□□□□□ -1.44
ECHDC1-215ENST00000475319 PHTF1Q9UMS5 762 aa6.06□□□□□ -1.44
ECHDC1-215ENST00000475319 SIK3Q9Y2K2 1263 aa6.06□□□□□ -1.44
ECHDC1-215ENST00000475319 NFS1Q9Y697 457 aa6.06□□□□□ -1.44
ECHDC1-215ENST00000475319 CEPT1Q9Y6K0 416 aa6.06□□□□□ -1.44
ECHDC1-215ENST00000475319 PPLO60437 1756 aa6.06□□□□□ -1.44
ECHDC1-215ENST00000475319 TNS3Q68CZ2 1445 aa6.06□□□□□ -1.44
ECHDC1-215ENST00000475319 PXDNQ92626 1479 aa6.06□□□□□ -1.44
ECHDC1-215ENST00000475319 MED23Q9ULK4 1368 aa6.05□□□□□ -1.44
ECHDC1-215ENST00000475319 A0A1B0GTQ1 180 aa6.05□□□□□ -1.44
ECHDC1-215ENST00000475319 LOC390937A0A1W2PQ73 354 aa6.05□□□□□ -1.44
ECHDC1-215ENST00000475319 CCDC78A2IDD5 438 aa6.05□□□□□ -1.44
ECHDC1-215ENST00000475319 ACOD1A6NK06 481 aa6.05□□□□□ -1.44
ECHDC1-215ENST00000475319 H0Y626 953 aa6.05□□□□□ -1.44
ECHDC1-215ENST00000475319 TXNDC9O14530 226 aa6.05□□□□□ -1.44
ECHDC1-215ENST00000475319 TNPO2O14787 897 aaKnown RBP6.05□□□□□ -1.44
ECHDC1-215ENST00000475319 GAS2O43903 313 aaKnown RBP6.05□□□□□ -1.44
ECHDC1-215ENST00000475319 PLA2G6O60733 806 aa6.05□□□□□ -1.44
ECHDC1-215ENST00000475319 TBX10O75333 385 aa6.05□□□□□ -1.44
ECHDC1-215ENST00000475319 FKBP6O75344 327 aa6.05□□□□□ -1.44
ECHDC1-215ENST00000475319 PALMO75781 387 aa6.05□□□□□ -1.44
ECHDC1-215ENST00000475319 ATP1A1P05023 1023 aaKnown RBP6.05□□□□□ -1.44
ECHDC1-215ENST00000475319 C8BP07358 591 aa6.05□□□□□ -1.44
ECHDC1-215ENST00000475319 WEE2P0C1S8 567 aa6.05□□□□□ -1.44
ECHDC1-215ENST00000475319 ACTN1P12814 892 aa6.05□□□□□ -1.44
ECHDC1-215ENST00000475319 RARGP13631 454 aa6.05□□□□□ -1.44
ECHDC1-215ENST00000475319 CHN1P15882 459 aa6.05□□□□□ -1.44
ECHDC1-215ENST00000475319 SLC9A1P19634 815 aa6.05□□□□□ -1.44
ECHDC1-215ENST00000475319 CDH5P33151 784 aaPredicted RBP6.05□□□□□ -1.44
ECHDC1-215ENST00000475319 IDUAP35475 653 aa6.05□□□□□ -1.44
ECHDC1-215ENST00000475319 SERPINB5P36952 375 aa6.05□□□□□ -1.44
ECHDC1-215ENST00000475319 HOXA1P49639 335 aaPredicted RBP6.05□□□□□ -1.44
ECHDC1-215ENST00000475319 SCNN1GP51170 649 aa6.05□□□□□ -1.44
ECHDC1-215ENST00000475319 ADKP55263 362 aaKnown RBP6.05□□□□□ -1.44
ECHDC1-215ENST00000475319 ZNF280AP59817 542 aaPredicted RBP6.05□□□□□ -1.44
ECHDC1-215ENST00000475319 RPL10AP62906 217 aaKnown RBP6.05□□□□□ -1.44
ECHDC1-215ENST00000475319 LRRC63Q05C16 580 aa6.05□□□□□ -1.44
ECHDC1-215ENST00000475319 SELENBP1Q13228 472 aa6.05□□□□□ -1.44
ECHDC1-215ENST00000475319 GRM1Q13255 1194 aa6.05□□□□□ -1.44
ECHDC1-215ENST00000475319 ZNF267Q14586 743 aaPredicted RBP6.05□□□□□ -1.44
ECHDC1-215ENST00000475319 SLC39A14Q15043 492 aa6.05□□□□□ -1.44
ECHDC1-215ENST00000475319 PDK3Q15120 406 aa6.05□□□□□ -1.44
ECHDC1-215ENST00000475319 KHDC1Q4VXA5 237 aaKnown RBP6.05□□□□□ -1.44
ECHDC1-215ENST00000475319 XKR3Q5GH77 459 aa6.05□□□□□ -1.44
ECHDC1-215ENST00000475319 ARHGEF16Q5VV41 709 aa6.05□□□□□ -1.44
ECHDC1-215ENST00000475319 EEF1DP3Q658K8 133 aa6.05□□□□□ -1.44
ECHDC1-215ENST00000475319 C11orf88Q6PI97 169 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms