RNA–Protein interactions for RNA: ENST00000474597.5

SSR1-204, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 1,808 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-204ENST00000474597 PSAT1Q9Y617 370 aa19.99■□□□□ 0.79
SSR1-204ENST00000474597 NUP210Q8TEM1 1887 aaPredicted RBP19.98■□□□□ 0.79
SSR1-204ENST00000474597 NDUFAB1O14561 156 aa19.98■□□□□ 0.79
SSR1-204ENST00000474597 SLC9A3R1O14745 358 aaPredicted RBP19.98■□□□□ 0.79
SSR1-204ENST00000474597 VAPBO95292 243 aa19.98■□□□□ 0.79
SSR1-204ENST00000474597 TCF3P15923 654 aa19.98■□□□□ 0.79
SSR1-204ENST00000474597 CD70P32970 193 aa19.98■□□□□ 0.79
SSR1-204ENST00000474597 SPRP35270 261 aaPredicted RBP19.98■□□□□ 0.79
SSR1-204ENST00000474597 PDE1BQ01064 536 aa19.98■□□□□ 0.79
SSR1-204ENST00000474597 SLC18A2Q05940 514 aa19.98■□□□□ 0.79
SSR1-204ENST00000474597 NSUN2Q08J23 767 aaKnown RBP eCLIP19.98■□□□□ 0.79
SSR1-204ENST00000474597 THOC5Q13769 683 aaKnown RBP19.98■□□□□ 0.79
SSR1-204ENST00000474597 CNGA3Q16281 694 aa19.98■□□□□ 0.79
SSR1-204ENST00000474597 PLEKHG6Q3KR16 790 aa19.98■□□□□ 0.79
SSR1-204ENST00000474597 HHATQ5VTY9 493 aa19.98■□□□□ 0.79
SSR1-204ENST00000474597 NLRP9Q7RTR0 991 aa19.98■□□□□ 0.79
SSR1-204ENST00000474597 METTL3Q86U44 580 aaKnown RBP19.98■□□□□ 0.79
SSR1-204ENST00000474597 ZNF557Q8N988 423 aaPredicted RBP19.98■□□□□ 0.79
SSR1-204ENST00000474597 GABPB2Q8TAK5 448 aaPredicted RBP19.98■□□□□ 0.79
SSR1-204ENST00000474597 OTUB2Q96DC9 234 aa19.98■□□□□ 0.79
SSR1-204ENST00000474597 AGAP2Q99490 1192 aa19.98■□□□□ 0.79
SSR1-204ENST00000474597 GDF15Q99988 308 aa19.98■□□□□ 0.79
SSR1-204ENST00000474597 FAM107BQ9H098 131 aa19.98■□□□□ 0.79
SSR1-204ENST00000474597 IGFLR1Q9H665 355 aa19.98■□□□□ 0.79
SSR1-204ENST00000474597 CCDC134Q9H6E4 229 aa19.98■□□□□ 0.79
SSR1-204ENST00000474597 SPHK2Q9NRA0 654 aa19.98■□□□□ 0.79
SSR1-204ENST00000474597 LHX3Q9UBR4 397 aa19.98■□□□□ 0.79
SSR1-204ENST00000474597 CHKBQ9Y259 395 aa19.98■□□□□ 0.79
SSR1-204ENST00000474597 GOLGA8TH3BQL2 631 aa19.97■□□□□ 0.79
SSR1-204ENST00000474597 COPEO14579 308 aa19.97■□□□□ 0.79
SSR1-204ENST00000474597 TM9SF1O15321 606 aa19.97■□□□□ 0.79
SSR1-204ENST00000474597 ITGA2BP08514 1039 aa19.97■□□□□ 0.79
SSR1-204ENST00000474597 ALADP13716 330 aa19.97■□□□□ 0.79
SSR1-204ENST00000474597 TSTD2Q5T7W7 516 aa19.97■□□□□ 0.79
SSR1-204ENST00000474597 RNF43Q68DV7 783 aa19.97■□□□□ 0.79
SSR1-204ENST00000474597 KIAA0930Q6ICG6 404 aaPredicted RBP19.97■□□□□ 0.79
SSR1-204ENST00000474597 TIFABQ6ZNK6 161 aa19.97■□□□□ 0.79
SSR1-204ENST00000474597 CELF5Q8N6W0 485 aaKnown RBP19.97■□□□□ 0.79
SSR1-204ENST00000474597 BLOC1S5Q8TDH9 187 aa19.97■□□□□ 0.79
SSR1-204ENST00000474597 TCP10LQ8TDR4 215 aa19.97■□□□□ 0.79
SSR1-204ENST00000474597 IRF7Q92985 503 aa19.97■□□□□ 0.79
SSR1-204ENST00000474597 RMDN1Q96DB5 314 aa19.97■□□□□ 0.79
SSR1-204ENST00000474597 CHMP6Q96FZ7 201 aa19.97■□□□□ 0.79
SSR1-204ENST00000474597 TREX1Q9NSU2 369 aa19.97■□□□□ 0.79
SSR1-204ENST00000474597 ABCB8Q9NUT2 735 aa19.97■□□□□ 0.79
SSR1-204ENST00000474597 DZANK1Q9NVP4 752 aa19.97■□□□□ 0.79
SSR1-204ENST00000474597 SLC2A6Q9UGQ3 507 aa19.97■□□□□ 0.79
SSR1-204ENST00000474597 C2orf16Q68DN1 1984 aa19.97■□□□□ 0.79
SSR1-204ENST00000474597 PAPSS2O95340 614 aaPredicted RBP19.97■□□□□ 0.79
SSR1-204ENST00000474597 CSE1LP55060 971 aaKnown RBP19.97■□□□□ 0.79
SSR1-204ENST00000474597 RALGPS1Q5JS13 557 aa19.97■□□□□ 0.79
SSR1-204ENST00000474597 DENND1AQ8TEH3 1009 aa19.97■□□□□ 0.79
SSR1-204ENST00000474597 CKAP2Q8WWK9 683 aa19.97■□□□□ 0.79
SSR1-204ENST00000474597 RBBP8Q99708 897 aa19.97■□□□□ 0.79
SSR1-204ENST00000474597 LINC00597Q9H2U6 94 aa19.97■□□□□ 0.79
SSR1-204ENST00000474597 HMX2A2RU54 273 aa19.96■□□□□ 0.79
SSR1-204ENST00000474597 ERICH4A6NGS2 130 aa19.96■□□□□ 0.79
SSR1-204ENST00000474597 EPOPA6NHQ4 379 aa19.96■□□□□ 0.79
SSR1-204ENST00000474597 RFPL1O75677 317 aa19.96■□□□□ 0.79
SSR1-204ENST00000474597 PENKP01210 267 aaPredicted RBP19.96■□□□□ 0.79
SSR1-204ENST00000474597 PLK1P53350 603 aa19.96■□□□□ 0.79
SSR1-204ENST00000474597 SLC20A2Q08357 652 aa19.96■□□□□ 0.79
SSR1-204ENST00000474597 PITRM1Q5JRX3 1037 aa19.96■□□□□ 0.79
SSR1-204ENST00000474597 RARS2Q5T160 578 aaKnown RBP19.96■□□□□ 0.79
SSR1-204ENST00000474597 CCT8L2Q96SF2 557 aa19.96■□□□□ 0.79
SSR1-204ENST00000474597 FAM167BQ9BTA0 163 aa19.96■□□□□ 0.79
SSR1-204ENST00000474597 TDRD1Q9BXT4 1180 aaKnown RBP19.96■□□□□ 0.79
SSR1-204ENST00000474597 ADGRE3Q9BY15 652 aa19.96■□□□□ 0.79
SSR1-204ENST00000474597 PCMTD2Q9NV79 361 aa19.96■□□□□ 0.79
SSR1-204ENST00000474597 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP19.96■□□□□ 0.796e-7■■■□□ 17.7
SSR1-204ENST00000474597 RAI2Q9Y5P3 530 aa19.96■□□□□ 0.79
SSR1-204ENST00000474597 WNT6Q9Y6F9 365 aa19.96■□□□□ 0.79
SSR1-204ENST00000474597 TIMM44O43615 452 aa19.95■□□□□ 0.78
SSR1-204ENST00000474597 ASMTLO95671 621 aa19.95■□□□□ 0.78
SSR1-204ENST00000474597 FAM107AO95990 144 aa19.95■□□□□ 0.78
SSR1-204ENST00000474597 MT-CO1P00395 513 aa19.95■□□□□ 0.78
SSR1-204ENST00000474597 VIMP08670 466 aaKnown RBP19.95■□□□□ 0.78
SSR1-204ENST00000474597 TYRP14679 529 aa19.95■□□□□ 0.78
SSR1-204ENST00000474597 LIMK2P53671 638 aa19.95■□□□□ 0.78
SSR1-204ENST00000474597 WDR4P57081 412 aaKnown RBP19.95■□□□□ 0.78
SSR1-204ENST00000474597 MSLNQ13421 630 aaPredicted RBP19.95■□□□□ 0.78
SSR1-204ENST00000474597 UGP2Q16851 508 aa19.95■□□□□ 0.78
SSR1-204ENST00000474597 LY6G5CQ5SRR4 150 aa19.95■□□□□ 0.78
SSR1-204ENST00000474597 NCEH1Q6PIU2 408 aa19.95■□□□□ 0.78
SSR1-204ENST00000474597 LVRNQ6Q4G3 990 aa19.95■□□□□ 0.78
SSR1-204ENST00000474597 SH2D5Q6ZV89 423 aa19.95■□□□□ 0.78
SSR1-204ENST00000474597 CPLX4Q7Z7G2 160 aa19.95■□□□□ 0.78
SSR1-204ENST00000474597 NDUFAF2Q8N183 169 aa19.95■□□□□ 0.78
SSR1-204ENST00000474597 CALML6Q8TD86 181 aa19.95■□□□□ 0.78
SSR1-204ENST00000474597 PDCD6IPQ8WUM4 868 aaKnown RBP19.95■□□□□ 0.78
SSR1-204ENST00000474597 PTPRN2Q92932 1015 aa19.95■□□□□ 0.78
SSR1-204ENST00000474597 ATXN7L3BQ96GX2 97 aa19.95■□□□□ 0.78
SSR1-204ENST00000474597 TRIB3Q96RU7 358 aa19.95■□□□□ 0.78
SSR1-204ENST00000474597 SLC13A1Q9BZW2 595 aa19.95■□□□□ 0.78
SSR1-204ENST00000474597 PCDHGC4Q9Y5F7 938 aa19.95■□□□□ 0.78
SSR1-204ENST00000474597 CHD9Q3L8U1 2897 aa19.95■□□□□ 0.78
SSR1-204ENST00000474597 K7ERQ8 282 aa19.95■□□□□ 0.78
SSR1-204ENST00000474597 FSHRP23945 695 aa19.95■□□□□ 0.78
SSR1-204ENST00000474597 HLA-FP30511 346 aa19.95■□□□□ 0.78
SSR1-204ENST00000474597 CCNFP41002 786 aa19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms