RNA–Protein interactions for RNA: ENST00000474056.5

UPF3A-203, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 748 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-203ENST00000474056 ABI3BPQ7Z7G0 1075 aa18.15■□□□□ 0.5
UPF3A-203ENST00000474056 TTC7BQ86TV6 843 aa18.15■□□□□ 0.5
UPF3A-203ENST00000474056 TSEN2Q8NCE0 465 aaKnown RBP18.15■□□□□ 0.5
UPF3A-203ENST00000474056 ADAMTS14Q8WXS8 1223 aa18.15■□□□□ 0.5
UPF3A-203ENST00000474056 BMFQ96LC9 184 aa18.15■□□□□ 0.5
UPF3A-203ENST00000474056 CSPG4P5Q96PW8 444 aa18.15■□□□□ 0.5
UPF3A-203ENST00000474056 TMEM121BQ9BXQ6 578 aaPredicted RBP18.15■□□□□ 0.5
UPF3A-203ENST00000474056 CALN1Q9BXU9 219 aa18.15■□□□□ 0.5
UPF3A-203ENST00000474056 DEF6Q9H4E7 631 aa18.15■□□□□ 0.5
UPF3A-203ENST00000474056 CTTNBP2NLQ9P2B4 639 aa18.15■□□□□ 0.5
UPF3A-203ENST00000474056 APOBEC2Q9Y235 224 aaKnown RBP18.15■□□□□ 0.5
UPF3A-203ENST00000474056 SSU72P8A0A1W2PR75 194 aa18.14■□□□□ 0.49
UPF3A-203ENST00000474056 POM121BA6NF01 834 aa18.14■□□□□ 0.49
UPF3A-203ENST00000474056 C1QTNF9BB2RNN3 333 aa18.14■□□□□ 0.49
UPF3A-203ENST00000474056 SDC3O75056 442 aa18.14■□□□□ 0.49
UPF3A-203ENST00000474056 H2AFZP0C0S5 128 aa18.14■□□□□ 0.49
UPF3A-203ENST00000474056 C1QTNF9P0C862 333 aa18.14■□□□□ 0.49
UPF3A-203ENST00000474056 TIMP2P16035 220 aa18.14■□□□□ 0.49
UPF3A-203ENST00000474056 ADKP55263 362 aaKnown RBP18.14■□□□□ 0.49
UPF3A-203ENST00000474056 CDH6P55285 790 aa18.14■□□□□ 0.49
UPF3A-203ENST00000474056 IL10RBQ08334 325 aa18.14■□□□□ 0.49
UPF3A-203ENST00000474056 TMCO3Q6UWJ1 677 aa18.14■□□□□ 0.49
UPF3A-203ENST00000474056 H2AFVQ71UI9 128 aa18.14■□□□□ 0.49
UPF3A-203ENST00000474056 KANSL1Q7Z3B3 1105 aa18.14■□□□□ 0.49
UPF3A-203ENST00000474056 PTAR1Q7Z6K3 402 aaPredicted RBP18.14■□□□□ 0.49
UPF3A-203ENST00000474056 ZSCAN30Q86W11 494 aa18.14■□□□□ 0.49
UPF3A-203ENST00000474056 SLC22A18ASQ8N1D0 253 aa18.14■□□□□ 0.49
UPF3A-203ENST00000474056 LZTR1Q8N653 840 aa18.14■□□□□ 0.49
UPF3A-203ENST00000474056 TSC1Q92574 1164 aa18.14■□□□□ 0.49
UPF3A-203ENST00000474056 KLF6Q99612 283 aaPredicted RBP18.14■□□□□ 0.49
UPF3A-203ENST00000474056 CHP1Q99653 195 aa18.14■□□□□ 0.49
UPF3A-203ENST00000474056 CINPQ9BW66 212 aaPredicted RBP18.14■□□□□ 0.49
UPF3A-203ENST00000474056 C1QTNF2Q9BXJ5 285 aa18.14■□□□□ 0.49
UPF3A-203ENST00000474056 CAAP1Q9H8G2 361 aa18.14■□□□□ 0.49
UPF3A-203ENST00000474056 DKK3Q9UBP4 350 aa18.14■□□□□ 0.49
UPF3A-203ENST00000474056 IPO11Q9UI26 975 aaKnown RBP18.14■□□□□ 0.49
UPF3A-203ENST00000474056 NEUROG3Q9Y4Z2 214 aa18.14■□□□□ 0.49
UPF3A-203ENST00000474056 HS3ST3A1Q9Y663 406 aa18.14■□□□□ 0.49
UPF3A-203ENST00000474056 EPG5Q9HCE0 2579 aa18.14■□□□□ 0.49
UPF3A-203ENST00000474056 ASPMQ8IZT6 3477 aa18.13■□□□□ 0.49
UPF3A-203ENST00000474056 A6NNZ2 444 aa18.13■□□□□ 0.49
UPF3A-203ENST00000474056 MUSKO15146 869 aa18.13■□□□□ 0.49
UPF3A-203ENST00000474056 TNFSF14O43557 240 aa18.13■□□□□ 0.49
UPF3A-203ENST00000474056 BUB1BO60566 1050 aaPredicted RBP18.13■□□□□ 0.49
UPF3A-203ENST00000474056 CD48P09326 243 aa18.13■□□□□ 0.49
UPF3A-203ENST00000474056 TPM1P09493 284 aa18.13■□□□□ 0.49
UPF3A-203ENST00000474056 GJC1P36383 396 aa18.13■□□□□ 0.49
UPF3A-203ENST00000474056 SSR1P43307 286 aaKnown RBP18.13■□□□□ 0.49
UPF3A-203ENST00000474056 KRT81Q14533 505 aa18.13■□□□□ 0.49
UPF3A-203ENST00000474056 GRM3Q14832 879 aa18.13■□□□□ 0.49
UPF3A-203ENST00000474056 ATP13A4Q4VNC1 1196 aa18.13■□□□□ 0.49
UPF3A-203ENST00000474056 UNQ6494/PRO21346Q6UXR6 183 aa18.13■□□□□ 0.49
UPF3A-203ENST00000474056 KYAT3Q6YP21 454 aaKnown RBP18.13■□□□□ 0.49
UPF3A-203ENST00000474056 KDM7AQ6ZMT4 941 aa18.13■□□□□ 0.49
UPF3A-203ENST00000474056 SRLQ86TD4 932 aa18.13■□□□□ 0.49
UPF3A-203ENST00000474056 CAMK1DQ8IU85 385 aa18.13■□□□□ 0.49
UPF3A-203ENST00000474056 CTNNBL1Q8WYA6 563 aaPredicted RBP18.13■□□□□ 0.49
UPF3A-203ENST00000474056 SUV39H2Q9H5I1 410 aa18.13■□□□□ 0.49
UPF3A-203ENST00000474056 GPR27Q9NS67 375 aa18.13■□□□□ 0.49
UPF3A-203ENST00000474056 ZNHIT6Q9NWK9 470 aaKnown RBP18.13■□□□□ 0.49
UPF3A-203ENST00000474056 UVRAGQ9P2Y5 699 aa18.13■□□□□ 0.49
UPF3A-203ENST00000474056 FTSJ1Q9UET6 329 aa18.13■□□□□ 0.49
UPF3A-203ENST00000474056 MYLKQ15746 1914 aa18.13■□□□□ 0.49
UPF3A-203ENST00000474056 FRYQ5TBA9 3013 aa18.13■□□□□ 0.49
UPF3A-203ENST00000474056 KNTC1P50748 2209 aa18.13■□□□□ 0.49
UPF3A-203ENST00000474056 LRP4O75096 1905 aa18.12■□□□□ 0.49
UPF3A-203ENST00000474056 AKAP13Q12802 2813 aa18.12■□□□□ 0.49
UPF3A-203ENST00000474056 TSPAN11A1L157 253 aa18.12■□□□□ 0.49
UPF3A-203ENST00000474056 AKR1B10O60218 316 aa18.12■□□□□ 0.49
UPF3A-203ENST00000474056 MMP20O60882 483 aa18.12■□□□□ 0.49
UPF3A-203ENST00000474056 PROSCO94903 275 aa18.12■□□□□ 0.49
UPF3A-203ENST00000474056 DKK1O94907 266 aa18.12■□□□□ 0.49
UPF3A-203ENST00000474056 IL4RP24394 825 aa18.12■□□□□ 0.49
UPF3A-203ENST00000474056 CSNK1DP48730 415 aa18.12■□□□□ 0.49
UPF3A-203ENST00000474056 ARSEP51690 589 aa18.12■□□□□ 0.49
UPF3A-203ENST00000474056 MMRN1Q13201 1228 aa18.12■□□□□ 0.49
UPF3A-203ENST00000474056 SGCGQ13326 291 aa18.12■□□□□ 0.49
UPF3A-203ENST00000474056 RFTN1Q14699 578 aaPredicted RBP18.12■□□□□ 0.49
UPF3A-203ENST00000474056 HADHQ16836 314 aaKnown RBP18.12■□□□□ 0.49
UPF3A-203ENST00000474056 Q6ZSR6 202 aa18.12■□□□□ 0.49
UPF3A-203ENST00000474056 ZSWIM9Q86XI8 627 aa18.12■□□□□ 0.49
UPF3A-203ENST00000474056 EID2Q8N6I1 236 aa18.12■□□□□ 0.49
UPF3A-203ENST00000474056 CXorf40AQ8TE69 158 aa18.12■□□□□ 0.49
UPF3A-203ENST00000474056 GATA6Q92908 595 aa18.12■□□□□ 0.49
UPF3A-203ENST00000474056 NSMCE3Q96MG7 304 aa18.12■□□□□ 0.49
UPF3A-203ENST00000474056 LENG8Q96PV6 779 aaPredicted RBP18.12■□□□□ 0.49
UPF3A-203ENST00000474056 SPTLC3Q9NUV7 552 aa18.12■□□□□ 0.49
UPF3A-203ENST00000474056 MSRB2Q9Y3D2 182 aa18.12■□□□□ 0.49
UPF3A-203ENST00000474056 TMEM253P0C7T8 217 aa18.11■□□□□ 0.49
UPF3A-203ENST00000474056 XPAP23025 273 aaPredicted RBP18.11■□□□□ 0.49
UPF3A-203ENST00000474056 TAS2R40P59535 323 aa18.11■□□□□ 0.49
UPF3A-203ENST00000474056 SLC10A7Q0GE19 358 aa18.11■□□□□ 0.49
UPF3A-203ENST00000474056 LBRQ14739 615 aaKnown RBP18.11■□□□□ 0.49
UPF3A-203ENST00000474056 UGP2Q16851 508 aa18.11■□□□□ 0.49
UPF3A-203ENST00000474056 TSR1Q2NL82 804 aaKnown RBP18.11■□□□□ 0.49
UPF3A-203ENST00000474056 TMCO4Q5TGY1 634 aa18.11■□□□□ 0.49
UPF3A-203ENST00000474056 DENND6BQ8NEG7 585 aa18.11■□□□□ 0.49
UPF3A-203ENST00000474056 FAM174AQ8TBP5 190 aa18.11■□□□□ 0.49
UPF3A-203ENST00000474056 FAM71BQ8TC56 605 aa18.11■□□□□ 0.49
UPF3A-203ENST00000474056 HCAR2Q8TDS4 363 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms