RNA–Protein interactions for RNA: ENST00000473494.6

SEC22A-204, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

TSL 3

Gene SEC22A, Length 1,011 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-204ENST00000473494 TTC39CQ8N584 583 aa6.52□□□□□ -1.37
SEC22A-204ENST00000473494 PDILTQ8N807 584 aa6.52□□□□□ -1.37
SEC22A-204ENST00000473494 CCDC89Q8N998 374 aa6.52□□□□□ -1.37
SEC22A-204ENST00000473494 BICD2Q8TD16 824 aa6.52□□□□□ -1.37
SEC22A-204ENST00000473494 SCFD2Q8WU76 684 aa6.52□□□□□ -1.37
SEC22A-204ENST00000473494 PSPC1Q8WXF1 523 aaKnown RBP6.52□□□□□ -1.37
SEC22A-204ENST00000473494 GTF3C6Q969F1 213 aa6.52□□□□□ -1.37
SEC22A-204ENST00000473494 RNF183Q96D59 192 aa6.52□□□□□ -1.37
SEC22A-204ENST00000473494 B3GNT4Q9C0J1 378 aa6.52□□□□□ -1.37
SEC22A-204ENST00000473494 KLHL31Q9H511 634 aa6.52□□□□□ -1.37
SEC22A-204ENST00000473494 FBRSL1Q9HCM7 1045 aaKnown RBP6.52□□□□□ -1.37
SEC22A-204ENST00000473494 SLC6A13Q9NSD5 602 aa6.52□□□□□ -1.37
SEC22A-204ENST00000473494 CTNNAL1Q9UBT7 734 aa6.52□□□□□ -1.37
SEC22A-204ENST00000473494 RAP2CQ9Y3L5 183 aa6.52□□□□□ -1.37
SEC22A-204ENST00000473494 CKAP5Q14008 2032 aa6.52□□□□□ -1.37
SEC22A-204ENST00000473494 SLC25A17O43808 307 aa6.51□□□□□ -1.37
SEC22A-204ENST00000473494 MT-CYBP00156 380 aaPredicted RBP6.51□□□□□ -1.37
SEC22A-204ENST00000473494 SRD5A1P18405 259 aa6.51□□□□□ -1.37
SEC22A-204ENST00000473494 DCTDP32321 178 aa6.51□□□□□ -1.37
SEC22A-204ENST00000473494 HADHAP40939 763 aa6.51□□□□□ -1.37
SEC22A-204ENST00000473494 MC1RQ01726 317 aa6.51□□□□□ -1.37
SEC22A-204ENST00000473494 CEBPZQ03701 1054 aaKnown RBP6.51□□□□□ -1.37
SEC22A-204ENST00000473494 SRSF1Q07955 248 aaKnown RBP eCLIP6.51□□□□□ -1.37
SEC22A-204ENST00000473494 DUSP28Q4G0W2 176 aa6.51□□□□□ -1.37
SEC22A-204ENST00000473494 SLC18B1Q6NT16 456 aa6.51□□□□□ -1.37
SEC22A-204ENST00000473494 TTI2Q6NXR4 508 aa6.51□□□□□ -1.37
SEC22A-204ENST00000473494 SZRD1Q7Z422 152 aa6.51□□□□□ -1.37
SEC22A-204ENST00000473494 YTHDF3Q7Z739 585 aaKnown RBP6.51□□□□□ -1.37
SEC22A-204ENST00000473494 DHX40Q8IX18 779 aaKnown RBP6.51□□□□□ -1.37
SEC22A-204ENST00000473494 WDTC1Q8N5D0 677 aa6.51□□□□□ -1.37
SEC22A-204ENST00000473494 RASSF8Q8NHQ8 419 aa6.51□□□□□ -1.37
SEC22A-204ENST00000473494 MSI2Q96DH6 328 aaKnown RBP6.51□□□□□ -1.37
SEC22A-204ENST00000473494 PABPC5Q96DU9 382 aaKnown RBP6.51□□□□□ -1.37
SEC22A-204ENST00000473494 FAM120BQ96EK7 910 aaKnown RBP6.51□□□□□ -1.37
SEC22A-204ENST00000473494 NEUROD6Q96NK8 337 aa6.51□□□□□ -1.37
SEC22A-204ENST00000473494 BBS4Q96RK4 519 aa6.51□□□□□ -1.37
SEC22A-204ENST00000473494 SERINC2Q96SA4 455 aa6.51□□□□□ -1.37
SEC22A-204ENST00000473494 QTRT1Q9BXR0 403 aaKnown RBP6.51□□□□□ -1.37
SEC22A-204ENST00000473494 NUF2Q9BZD4 464 aa6.51□□□□□ -1.37
SEC22A-204ENST00000473494 ASAH2Q9NR71 780 aa6.51□□□□□ -1.37
SEC22A-204ENST00000473494 TMEM184CQ9NVA4 438 aa6.51□□□□□ -1.37
SEC22A-204ENST00000473494 MSRB1Q9NZV6 116 aa6.51□□□□□ -1.37
SEC22A-204ENST00000473494 ZMYM2Q9UBW7 1377 aa6.5□□□□□ -1.37
SEC22A-204ENST00000473494 FAM237BA0A1B0GVD1 139 aa6.5□□□□□ -1.37
SEC22A-204ENST00000473494 CGB1A6NKQ9 187 aa6.5□□□□□ -1.37
SEC22A-204ENST00000473494 A6NNC1 897 aa6.5□□□□□ -1.37
SEC22A-204ENST00000473494 VILLO15195 856 aa6.5□□□□□ -1.37
SEC22A-204ENST00000473494 HOXD9P28356 352 aaPredicted RBP6.5□□□□□ -1.37
SEC22A-204ENST00000473494 PIP4K2AP48426 406 aaPredicted RBP6.5□□□□□ -1.37
SEC22A-204ENST00000473494 GNAQP50148 359 aa6.5□□□□□ -1.37
SEC22A-204ENST00000473494 RUNX2Q13950 521 aa6.5□□□□□ -1.37
SEC22A-204ENST00000473494 FGFBP1Q14512 234 aa6.5□□□□□ -1.37
SEC22A-204ENST00000473494 PPP2R5BQ15173 497 aa6.5□□□□□ -1.37
SEC22A-204ENST00000473494 PLEKHO1Q53GL0 409 aaPredicted RBP6.5□□□□□ -1.37
SEC22A-204ENST00000473494 SARM1Q6SZW1 724 aa6.5□□□□□ -1.37
SEC22A-204ENST00000473494 ANKRD13BQ86YJ7 626 aa6.5□□□□□ -1.37
SEC22A-204ENST00000473494 DENND6AQ8IWF6 608 aa6.5□□□□□ -1.37
SEC22A-204ENST00000473494 SNAPC3Q92966 411 aa6.5□□□□□ -1.37
SEC22A-204ENST00000473494 MMABQ96EY8 250 aaPredicted RBP6.5□□□□□ -1.37
SEC22A-204ENST00000473494 ZNF333Q96JL9 665 aa6.5□□□□□ -1.37
SEC22A-204ENST00000473494 MRIQ9BWK5 157 aa6.5□□□□□ -1.37
SEC22A-204ENST00000473494 MVB12BQ9H7P6 319 aa6.5□□□□□ -1.37
SEC22A-204ENST00000473494 MAP6D1Q9H9H5 199 aa6.5□□□□□ -1.37
SEC22A-204ENST00000473494 ADD3Q9UEY8 706 aaKnown RBP6.5□□□□□ -1.37
SEC22A-204ENST00000473494 NRBP1Q9UHY1 535 aa6.5□□□□□ -1.37
SEC22A-204ENST00000473494 HAO1Q9UJM8 370 aa6.5□□□□□ -1.37
SEC22A-204ENST00000473494 FAM96BQ9Y3D0 163 aa6.5□□□□□ -1.37
SEC22A-204ENST00000473494 RUSC2Q8N2Y8 1516 aa6.5□□□□□ -1.37
SEC22A-204ENST00000473494 DCAF1Q9Y4B6 1507 aa6.5□□□□□ -1.37
SEC22A-204ENST00000473494 GAGE12JA6NER3 117 aa6.49□□□□□ -1.37
SEC22A-204ENST00000473494 EIF3CLB5ME19 914 aaKnown RBP6.49□□□□□ -1.37
SEC22A-204ENST00000473494 ZNF814B7Z6K7 855 aa6.49□□□□□ -1.37
SEC22A-204ENST00000473494 HSPB6O14558 160 aa6.49□□□□□ -1.37
SEC22A-204ENST00000473494 MDM4O15151 490 aa6.49□□□□□ -1.37
SEC22A-204ENST00000473494 FIBPO43427 364 aa6.49□□□□□ -1.37
SEC22A-204ENST00000473494 ATG13O75143 517 aa6.49□□□□□ -1.37
SEC22A-204ENST00000473494 PORP16435 677 aaPredicted RBP6.49□□□□□ -1.37
SEC22A-204ENST00000473494 PPARGP37231 505 aaPredicted RBP6.49□□□□□ -1.37
SEC22A-204ENST00000473494 UBA7P41226 1012 aa6.49□□□□□ -1.37
SEC22A-204ENST00000473494 GARSP41250 739 aaKnown RBP6.49□□□□□ -1.37
SEC22A-204ENST00000473494 RAD52P43351 418 aa6.49□□□□□ -1.37
SEC22A-204ENST00000473494 NIPAL4Q0D2K0 466 aa6.49□□□□□ -1.37
SEC22A-204ENST00000473494 GRIK3Q13003 919 aa6.49□□□□□ -1.37
SEC22A-204ENST00000473494 WTAPQ15007 396 aa6.49□□□□□ -1.37
SEC22A-204ENST00000473494 SHBQ15464 509 aa6.49□□□□□ -1.37
SEC22A-204ENST00000473494 INPP5JQ15735 1006 aaPredicted RBP6.49□□□□□ -1.37
SEC22A-204ENST00000473494 LRRC8EQ6NSJ5 796 aa6.49□□□□□ -1.37
SEC22A-204ENST00000473494 HMBOX1Q6NT76 420 aa6.49□□□□□ -1.37
SEC22A-204ENST00000473494 TMEM71Q6P5X7 295 aa6.49□□□□□ -1.37
SEC22A-204ENST00000473494 TMEM154Q6P9G4 183 aa6.49□□□□□ -1.37
SEC22A-204ENST00000473494 GPSM1Q86YR5 675 aa6.49□□□□□ -1.37
SEC22A-204ENST00000473494 CNGA4Q8IV77 575 aa6.49□□□□□ -1.37
SEC22A-204ENST00000473494 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.49□□□□□ -1.37
SEC22A-204ENST00000473494 HORMAD2Q8N7B1 307 aa6.49□□□□□ -1.37
SEC22A-204ENST00000473494 PIGOQ8TEQ8 1089 aa6.49□□□□□ -1.37
SEC22A-204ENST00000473494 POMGNT1Q8WZA1 660 aa6.49□□□□□ -1.37
SEC22A-204ENST00000473494 WDFY2Q96P53 400 aa6.49□□□□□ -1.37
SEC22A-204ENST00000473494 MXRA8Q9BRK3 442 aa6.49□□□□□ -1.37
SEC22A-204ENST00000473494 POLR1BQ9H9Y6 1135 aa6.49□□□□□ -1.37
SEC22A-204ENST00000473494 ANKRD10Q9NXR5 420 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms