RNA–Protein interactions for RNA: ENST00000472479.1

UBE2F-220, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 2

Gene UBE2F, Length 1,458 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-220ENST00000472479 SLC8A1P32418 973 aa10.64□□□□□ -0.71
UBE2F-220ENST00000472479 CD68P34810 354 aaPredicted RBP10.64□□□□□ -0.71
UBE2F-220ENST00000472479 WNT3AP56704 352 aa10.64□□□□□ -0.71
UBE2F-220ENST00000472479 POLR2LP62875 67 aaKnown RBP10.64□□□□□ -0.71
UBE2F-220ENST00000472479 CDK18Q07002 472 aa10.64□□□□□ -0.71
UBE2F-220ENST00000472479 SPARCL1Q14515 664 aa10.64□□□□□ -0.71
UBE2F-220ENST00000472479 HLTFQ14527 1009 aaKnown RBP eCLIP10.64□□□□□ -0.71
UBE2F-220ENST00000472479 IZUMO3Q5VZ72 239 aa10.64□□□□□ -0.71
UBE2F-220ENST00000472479 ZNF776Q68DI1 518 aaPredicted RBP10.64□□□□□ -0.71
UBE2F-220ENST00000472479 FBXL19Q6PCT2 694 aa10.64□□□□□ -0.71
UBE2F-220ENST00000472479 TTC7BQ86TV6 843 aa10.64□□□□□ -0.71
UBE2F-220ENST00000472479 TMPRSS6Q8IU80 811 aa10.64□□□□□ -0.71
UBE2F-220ENST00000472479 CAMK1DQ8IU85 385 aa10.64□□□□□ -0.71
UBE2F-220ENST00000472479 PDCD7Q8N8D1 485 aaKnown RBP10.64□□□□□ -0.71
UBE2F-220ENST00000472479 TSTD1Q8NFU3 115 aa10.64□□□□□ -0.71
UBE2F-220ENST00000472479 OR2T3Q8NH03 318 aa10.64□□□□□ -0.71
UBE2F-220ENST00000472479 PIP4K2CQ8TBX8 421 aa10.64□□□□□ -0.71
UBE2F-220ENST00000472479 HMGB4Q8WW32 186 aa10.64□□□□□ -0.71
UBE2F-220ENST00000472479 SIPA1Q96FS4 1042 aa10.64□□□□□ -0.71
UBE2F-220ENST00000472479 IMP4Q96G21 291 aaKnown RBP10.64□□□□□ -0.71
UBE2F-220ENST00000472479 SNF8Q96H20 258 aa10.64□□□□□ -0.71
UBE2F-220ENST00000472479 LRIG1Q96JA1 1093 aa10.64□□□□□ -0.71
UBE2F-220ENST00000472479 TUBGCP5Q96RT8 1024 aa10.64□□□□□ -0.71
UBE2F-220ENST00000472479 OMDQ99983 421 aa10.64□□□□□ -0.71
UBE2F-220ENST00000472479 FICDQ9BVA6 458 aa10.64□□□□□ -0.71
UBE2F-220ENST00000472479 OSBPL1AQ9BXW6 950 aa10.64□□□□□ -0.71
UBE2F-220ENST00000472479 ADGRE3Q9BY15 652 aa10.64□□□□□ -0.71
UBE2F-220ENST00000472479 FBRSQ9HAH7 460 aa10.64□□□□□ -0.71
UBE2F-220ENST00000472479 VPS45Q9NRW7 570 aa10.64□□□□□ -0.71
UBE2F-220ENST00000472479 CHKBQ9Y259 395 aa10.64□□□□□ -0.71
UBE2F-220ENST00000472479 PCDHB9Q9Y5E1 797 aa10.64□□□□□ -0.71
UBE2F-220ENST00000472479 SPTBN5Q9NRC6 3674 aaKnown RBP10.64□□□□□ -0.71
UBE2F-220ENST00000472479 A0A1W2PQ67 120 aa10.63□□□□□ -0.71
UBE2F-220ENST00000472479 SHISA7A6NL88 538 aa10.63□□□□□ -0.71
UBE2F-220ENST00000472479 NEMP1O14524 444 aa10.63□□□□□ -0.71
UBE2F-220ENST00000472479 ALOX15BO15296 676 aa10.63□□□□□ -0.71
UBE2F-220ENST00000472479 ADAM23O75077 832 aa10.63□□□□□ -0.71
UBE2F-220ENST00000472479 ZNF821O75541 412 aaPredicted RBP10.63□□□□□ -0.71
UBE2F-220ENST00000472479 ITIH2P19823 946 aa10.63□□□□□ -0.71
UBE2F-220ENST00000472479 MAGEA9P43362 315 aa10.63□□□□□ -0.71
UBE2F-220ENST00000472479 CXCL12P48061 93 aa10.63□□□□□ -0.71
UBE2F-220ENST00000472479 DGKEP52429 567 aa10.63□□□□□ -0.71
UBE2F-220ENST00000472479 SKOR1P84550 965 aa10.63□□□□□ -0.71
UBE2F-220ENST00000472479 CAMK2GQ13555 558 aaPredicted RBP10.63□□□□□ -0.71
UBE2F-220ENST00000472479 CRY1Q16526 586 aa10.63□□□□□ -0.71
UBE2F-220ENST00000472479 TTC31Q49AM3 519 aaPredicted RBP10.63□□□□□ -0.71
UBE2F-220ENST00000472479 NAPEPLDQ6IQ20 393 aa10.63□□□□□ -0.71
UBE2F-220ENST00000472479 LINC00523Q86TU6 105 aa10.63□□□□□ -0.71
UBE2F-220ENST00000472479 PPIL6Q8IXY8 311 aa10.63□□□□□ -0.71
UBE2F-220ENST00000472479 IFT20Q8IY31 132 aa10.63□□□□□ -0.71
UBE2F-220ENST00000472479 HDDC3Q8N4P3 179 aa10.63□□□□□ -0.71
UBE2F-220ENST00000472479 LPCAT1Q8NF37 534 aa10.63□□□□□ -0.71
UBE2F-220ENST00000472479 ARRDC2Q8TBH0 407 aa10.63□□□□□ -0.71
UBE2F-220ENST00000472479 SLCO2A1Q92959 643 aa10.63□□□□□ -0.71
UBE2F-220ENST00000472479 ZNF641Q96N77 438 aaPredicted RBP10.63□□□□□ -0.71
UBE2F-220ENST00000472479 GABRG3Q99928 467 aa10.63□□□□□ -0.71
UBE2F-220ENST00000472479 APOL2Q9BQE5 337 aa10.63□□□□□ -0.71
UBE2F-220ENST00000472479 CPEB1Q9BZB8 566 aaKnown RBP10.63□□□□□ -0.71
UBE2F-220ENST00000472479 LRRC40Q9H9A6 602 aa10.63□□□□□ -0.71
UBE2F-220ENST00000472479 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.63□□□□□ -0.71
UBE2F-220ENST00000472479 HCN2Q9UL51 889 aa10.63□□□□□ -0.71
UBE2F-220ENST00000472479 V9GYY5 206 aaPredicted RBP10.63□□□□□ -0.71
UBE2F-220ENST00000472479 MIA3Q5JRA6 1907 aa10.63□□□□□ -0.71
UBE2F-220ENST00000472479 SHROOM3Q8TF72 1996 aa10.63□□□□□ -0.71
UBE2F-220ENST00000472479 ERI2A8K979 691 aaKnown RBP10.62□□□□□ -0.71
UBE2F-220ENST00000472479 CHURC1-FNTBB4DL54 471 aa10.62□□□□□ -0.71
UBE2F-220ENST00000472479 GOLGA8MH3BSY2 632 aa10.62□□□□□ -0.71
UBE2F-220ENST00000472479 TNFRSF10AO00220 468 aa10.62□□□□□ -0.71
UBE2F-220ENST00000472479 DNALI1O14645 258 aaPredicted RBP10.62□□□□□ -0.71
UBE2F-220ENST00000472479 SOCS5O75159 536 aa10.62□□□□□ -0.71
UBE2F-220ENST00000472479 USP12O75317 370 aa10.62□□□□□ -0.71
UBE2F-220ENST00000472479 RNASEH2AO75792 299 aaKnown RBP10.62□□□□□ -0.71
UBE2F-220ENST00000472479 ADH1BP00325 375 aa10.62□□□□□ -0.71
UBE2F-220ENST00000472479 CPP00450 1065 aa10.62□□□□□ -0.71
UBE2F-220ENST00000472479 AGTP01019 485 aa10.62□□□□□ -0.71
UBE2F-220ENST00000472479 CR2P20023 1033 aa10.62□□□□□ -0.71
UBE2F-220ENST00000472479 COL9A1P20849 921 aa10.62□□□□□ -0.71
UBE2F-220ENST00000472479 RPS9P46781 194 aaKnown RBP10.62□□□□□ -0.71
UBE2F-220ENST00000472479 CCR3P51677 355 aa10.62□□□□□ -0.71
UBE2F-220ENST00000472479 PLTPP55058 493 aa10.62□□□□□ -0.71
UBE2F-220ENST00000472479 FAM193AP78312 1265 aa10.62□□□□□ -0.71
UBE2F-220ENST00000472479 SATB1Q01826 763 aa10.62□□□□□ -0.71
UBE2F-220ENST00000472479 GALNT3Q14435 633 aa10.62□□□□□ -0.71
UBE2F-220ENST00000472479 CST6Q15828 149 aa10.62□□□□□ -0.71
UBE2F-220ENST00000472479 ZNF805Q5CZA5 627 aa10.62□□□□□ -0.71
UBE2F-220ENST00000472479 ANO7Q6IWH7 933 aa10.62□□□□□ -0.71
UBE2F-220ENST00000472479 KIAA1211LQ6NV74 962 aa10.62□□□□□ -0.71
UBE2F-220ENST00000472479 PKN3Q6P5Z2 889 aa10.62□□□□□ -0.71
UBE2F-220ENST00000472479 TMEM92Q6UXU6 159 aa10.62□□□□□ -0.71
UBE2F-220ENST00000472479 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP10.62□□□□□ -0.71
UBE2F-220ENST00000472479 SYT13Q7L8C5 426 aa10.62□□□□□ -0.71
UBE2F-220ENST00000472479 PRPF39Q86UA1 669 aaKnown RBP10.62□□□□□ -0.71
UBE2F-220ENST00000472479 SPEM1Q8N4L4 309 aa10.62□□□□□ -0.71
UBE2F-220ENST00000472479 LRRN4CLQ8ND94 238 aa10.62□□□□□ -0.71
UBE2F-220ENST00000472479 TMIEQ8NEW7 156 aa10.62□□□□□ -0.71
UBE2F-220ENST00000472479 OXNAD1Q96HP4 312 aaPredicted RBP10.62□□□□□ -0.71
UBE2F-220ENST00000472479 HHIPQ96QV1 700 aa10.62□□□□□ -0.71
UBE2F-220ENST00000472479 FAM129BQ96TA1 746 aa10.62□□□□□ -0.71
UBE2F-220ENST00000472479 TBL1YQ9BQ87 522 aa10.62□□□□□ -0.71
UBE2F-220ENST00000472479 CHRDQ9H2X0 955 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms