RNA–Protein interactions for RNA: ENST00000471752.1

USP48-207, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 445 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-207ENST00000471752 LRRC53A6NM62 1247 aa8.18□□□□□ -1.1
USP48-207ENST00000471752 A8MX80 341 aa8.18□□□□□ -1.1
USP48-207ENST00000471752 AGRPO00253 132 aa8.18□□□□□ -1.1
USP48-207ENST00000471752 DDX3XO00571 662 aaKnown RBP eCLIP8.18□□□□□ -1.1
USP48-207ENST00000471752 RIOK3O14730 519 aaKnown RBP8.18□□□□□ -1.1
USP48-207ENST00000471752 ZIC2O95409 532 aaPredicted RBP8.18□□□□□ -1.1
USP48-207ENST00000471752 POP4O95707 220 aaKnown RBP8.18□□□□□ -1.1
USP48-207ENST00000471752 GSRP00390 522 aa8.18□□□□□ -1.1
USP48-207ENST00000471752 CSF2P04141 144 aa8.18□□□□□ -1.1
USP48-207ENST00000471752 MPOP05164 745 aa8.18□□□□□ -1.1
USP48-207ENST00000471752 CKMT1AP12532 417 aa8.18□□□□□ -1.1
USP48-207ENST00000471752 GM2AP17900 193 aa8.18□□□□□ -1.1
USP48-207ENST00000471752 IL1R2P27930 398 aa8.18□□□□□ -1.1
USP48-207ENST00000471752 RECQLP46063 649 aaPredicted RBP8.18□□□□□ -1.1
USP48-207ENST00000471752 MAPKAPK2P49137 400 aa8.18□□□□□ -1.1
USP48-207ENST00000471752 PAPOLAP51003 745 aaKnown RBP8.18□□□□□ -1.1
USP48-207ENST00000471752 ADKP55263 362 aaKnown RBP8.18□□□□□ -1.1
USP48-207ENST00000471752 GSCP56915 257 aaPredicted RBP8.18□□□□□ -1.1
USP48-207ENST00000471752 PFN3P60673 137 aa8.18□□□□□ -1.1
USP48-207ENST00000471752 RPS21P63220 83 aaKnown RBP8.18□□□□□ -1.1
USP48-207ENST00000471752 IHHQ14623 411 aa8.18□□□□□ -1.1
USP48-207ENST00000471752 STX1AQ16623 288 aa8.18□□□□□ -1.1
USP48-207ENST00000471752 KLHL40Q2TBA0 621 aa8.18□□□□□ -1.1
USP48-207ENST00000471752 CDCP2Q5VXM1 449 aa8.18□□□□□ -1.1
USP48-207ENST00000471752 SMYD5Q6GMV2 418 aa8.18□□□□□ -1.1
USP48-207ENST00000471752 DNAJC24Q6P3W2 148 aa8.18□□□□□ -1.1
USP48-207ENST00000471752 GUSBP11Q6P575 273 aa8.18□□□□□ -1.1
USP48-207ENST00000471752 SASS6Q6UVJ0 657 aa8.18□□□□□ -1.1
USP48-207ENST00000471752 PCSK4Q6UW60 755 aa8.18□□□□□ -1.1
USP48-207ENST00000471752 GDPD4Q6W3E5 623 aa8.18□□□□□ -1.1
USP48-207ENST00000471752 ZNF354CQ86Y25 554 aa8.18□□□□□ -1.1
USP48-207ENST00000471752 SPNS2Q8IVW8 549 aa8.18□□□□□ -1.1
USP48-207ENST00000471752 ARHGAP12Q8IWW6 846 aa8.18□□□□□ -1.1
USP48-207ENST00000471752 NPWQ8N729 165 aa8.18□□□□□ -1.1
USP48-207ENST00000471752 RTL3Q8N8U3 475 aaKnown RBP8.18□□□□□ -1.1
USP48-207ENST00000471752 DCBLD1Q8N8Z6 715 aa8.18□□□□□ -1.1
USP48-207ENST00000471752 TP53I13Q8NBR0 393 aaPredicted RBP8.18□□□□□ -1.1
USP48-207ENST00000471752 TSEN2Q8NCE0 465 aaKnown RBP8.18□□□□□ -1.1
USP48-207ENST00000471752 ZNF548Q8NEK5 533 aaPredicted RBP8.18□□□□□ -1.1
USP48-207ENST00000471752 OR2AP1Q8NGE2 309 aa8.18□□□□□ -1.1
USP48-207ENST00000471752 LMX1AQ8TE12 382 aa8.18□□□□□ -1.1
USP48-207ENST00000471752 LRRN4Q8WUT4 740 aa8.18□□□□□ -1.1
USP48-207ENST00000471752 PTCD2Q8WV60 388 aaKnown RBP8.18□□□□□ -1.1
USP48-207ENST00000471752 TSACCQ96A04 125 aaPredicted RBP8.18□□□□□ -1.1
USP48-207ENST00000471752 ISG20Q96AZ6 181 aaKnown RBP8.18□□□□□ -1.1
USP48-207ENST00000471752 NAF1Q96HR8 494 aaKnown RBP8.18□□□□□ -1.1
USP48-207ENST00000471752 BTBD6Q96KE9 485 aa8.18□□□□□ -1.1
USP48-207ENST00000471752 TTYH3Q9C0H2 523 aa8.18□□□□□ -1.1
USP48-207ENST00000471752 HAUS4Q9H6D7 363 aa8.18□□□□□ -1.1
USP48-207ENST00000471752 LRRC19Q9H756 370 aa8.18□□□□□ -1.1
USP48-207ENST00000471752 PDFQ9HBH1 243 aa8.18□□□□□ -1.1
USP48-207ENST00000471752 ANO10Q9NW15 660 aa8.18□□□□□ -1.1
USP48-207ENST00000471752 RABGEF1Q9UJ41 708 aa8.18□□□□□ -1.1
USP48-207ENST00000471752 PAXBP1Q9Y5B6 917 aa8.18□□□□□ -1.1
USP48-207ENST00000471752 TP53BP1Q12888 1972 aaPredicted RBP8.18□□□□□ -1.1
USP48-207ENST00000471752 A0A087WV48 116 aa8.17□□□□□ -1.1
USP48-207ENST00000471752 TMEM191CA6NGB0 347 aa8.17□□□□□ -1.1
USP48-207ENST00000471752 A6NNZ2 444 aa8.17□□□□□ -1.1
USP48-207ENST00000471752 NEMP1O14524 444 aa8.17□□□□□ -1.1
USP48-207ENST00000471752 YY2O15391 372 aa8.17□□□□□ -1.1
USP48-207ENST00000471752 AP1G1O43747 822 aa8.17□□□□□ -1.1
USP48-207ENST00000471752 CALB1P05937 261 aa8.17□□□□□ -1.1
USP48-207ENST00000471752 C1SP09871 688 aa8.17□□□□□ -1.1
USP48-207ENST00000471752 NME1P15531 152 aaKnown RBP8.17□□□□□ -1.1
USP48-207ENST00000471752 JUNDP17535 347 aa8.17□□□□□ -1.1
USP48-207ENST00000471752 TNFAIP3P21580 790 aa8.17□□□□□ -1.1
USP48-207ENST00000471752 RHOAP61586 193 aa8.17□□□□□ -1.1
USP48-207ENST00000471752 CCDC173Q0VFZ6 552 aa8.17□□□□□ -1.1
USP48-207ENST00000471752 OVGP1Q12889 678 aa8.17□□□□□ -1.1
USP48-207ENST00000471752 SGCGQ13326 291 aa8.17□□□□□ -1.1
USP48-207ENST00000471752 MTA1Q13330 715 aa8.17□□□□□ -1.1
USP48-207ENST00000471752 RTP5Q14D33 572 aa8.17□□□□□ -1.1
USP48-207ENST00000471752 IRF4Q15306 451 aa8.17□□□□□ -1.1
USP48-207ENST00000471752 WSCD2Q2TBF2 565 aa8.17□□□□□ -1.1
USP48-207ENST00000471752 ARL13BQ3SXY8 428 aa8.17□□□□□ -1.1
USP48-207ENST00000471752 PLEKHA7Q6IQ23 1121 aa8.17□□□□□ -1.1
USP48-207ENST00000471752 TRIM72Q6ZMU5 477 aa8.17□□□□□ -1.1
USP48-207ENST00000471752 PLPP6Q8IY26 295 aa8.17□□□□□ -1.1
USP48-207ENST00000471752 SLC35F3Q8IY50 421 aa8.17□□□□□ -1.1
USP48-207ENST00000471752 UMODL1-AS1Q8N2C9 162 aa8.17□□□□□ -1.1
USP48-207ENST00000471752 MSANTD4Q8NCY6 345 aa8.17□□□□□ -1.1
USP48-207ENST00000471752 RFFLQ8WZ73 363 aa8.17□□□□□ -1.1
USP48-207ENST00000471752 CCDC114Q96M63 670 aa8.17□□□□□ -1.1
USP48-207ENST00000471752 LENG8Q96PV6 779 aaPredicted RBP8.17□□□□□ -1.1
USP48-207ENST00000471752 HS3ST6Q96QI5 342 aa8.17□□□□□ -1.1
USP48-207ENST00000471752 CNPY3Q9BT09 278 aa8.17□□□□□ -1.1
USP48-207ENST00000471752 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.17□□□□□ -1.1
USP48-207ENST00000471752 PCDH12Q9NPG4 1184 aa8.17□□□□□ -1.1
USP48-207ENST00000471752 CWC15Q9P013 229 aaKnown RBP8.17□□□□□ -1.1
USP48-207ENST00000471752 CLCA2Q9UQC9 943 aa8.17□□□□□ -1.1
USP48-207ENST00000471752 MYLKQ15746 1914 aa8.17□□□□□ -1.1
USP48-207ENST00000471752 RP1P56715 2156 aa8.17□□□□□ -1.1
USP48-207ENST00000471752 WASH4PA8MWX3 477 aa8.16□□□□□ -1.1
USP48-207ENST00000471752 FPGTO14772 594 aa8.16□□□□□ -1.1
USP48-207ENST00000471752 YKT6O15498 198 aa8.16□□□□□ -1.1
USP48-207ENST00000471752 AQP9O43315 295 aa8.16□□□□□ -1.1
USP48-207ENST00000471752 TSPAN6O43657 245 aa8.16□□□□□ -1.1
USP48-207ENST00000471752 PRAMEF11O60813 436 aa8.16□□□□□ -1.1
USP48-207ENST00000471752 USP12O75317 370 aa8.16□□□□□ -1.1
USP48-207ENST00000471752 PEX11BO96011 259 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms