RNA–Protein interactions for RNA: ENST00000471260.1

HMGN1-211, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 615 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-211ENST00000471260 OR13H1Q8NG92 308 aa13.68□□□□□ -0.22
HMGN1-211ENST00000471260 SYN2Q92777 582 aaPredicted RBP13.68□□□□□ -0.22
HMGN1-211ENST00000471260 HMCESQ96FZ2 354 aa13.68□□□□□ -0.22
HMGN1-211ENST00000471260 ISCUQ9H1K1 167 aa13.68□□□□□ -0.22
HMGN1-211ENST00000471260 CCDC86Q9H6F5 360 aaKnown RBP13.68□□□□□ -0.22
HMGN1-211ENST00000471260 LRRC19Q9H756 370 aa13.68□□□□□ -0.22
HMGN1-211ENST00000471260 FZD3Q9NPG1 666 aa13.68□□□□□ -0.22
HMGN1-211ENST00000471260 GPR27Q9NS67 375 aa13.68□□□□□ -0.22
HMGN1-211ENST00000471260 CNOT8Q9UFF9 292 aaKnown RBP13.68□□□□□ -0.22
HMGN1-211ENST00000471260 AP4E1Q9UPM8 1137 aa13.68□□□□□ -0.22
HMGN1-211ENST00000471260 CA5BQ9Y2D0 317 aa13.68□□□□□ -0.22
HMGN1-211ENST00000471260 ARID1BQ8NFD5 2236 aaPredicted RBP13.68□□□□□ -0.22
HMGN1-211ENST00000471260 WDFY3Q8IZQ1 3526 aa13.67□□□□□ -0.22
HMGN1-211ENST00000471260 NEMP2A6NFY4 417 aa13.67□□□□□ -0.22
HMGN1-211ENST00000471260 EEF2KO00418 725 aaKnown RBP13.67□□□□□ -0.22
HMGN1-211ENST00000471260 TOR1BO14657 336 aa13.67□□□□□ -0.22
HMGN1-211ENST00000471260 FPGTO14772 594 aa13.67□□□□□ -0.22
HMGN1-211ENST00000471260 AREL1O15033 823 aa13.67□□□□□ -0.22
HMGN1-211ENST00000471260 PRPSAP2O60256 369 aa13.67□□□□□ -0.22
HMGN1-211ENST00000471260 FECHP22830 423 aa13.67□□□□□ -0.22
HMGN1-211ENST00000471260 DGKAP23743 735 aa13.67□□□□□ -0.22
HMGN1-211ENST00000471260 GKP32189 559 aa13.67□□□□□ -0.22
HMGN1-211ENST00000471260 PCK1P35558 622 aa13.67□□□□□ -0.22
HMGN1-211ENST00000471260 HNF1BP35680 557 aa13.67□□□□□ -0.22
HMGN1-211ENST00000471260 ABL2P42684 1182 aa13.67□□□□□ -0.22
HMGN1-211ENST00000471260 ACADVLP49748 655 aa13.67□□□□□ -0.22
HMGN1-211ENST00000471260 ZNF211Q13398 564 aaPredicted RBP13.67□□□□□ -0.22
HMGN1-211ENST00000471260 TUBB2AQ13885 445 aa13.67□□□□□ -0.22
HMGN1-211ENST00000471260 FGL2Q14314 439 aa13.67□□□□□ -0.22
HMGN1-211ENST00000471260 DHRS13Q6UX07 377 aa13.67□□□□□ -0.22
HMGN1-211ENST00000471260 LEKR1Q6ZMV7 388 aa13.67□□□□□ -0.22
HMGN1-211ENST00000471260 Q6ZSR6 202 aa13.67□□□□□ -0.22
HMGN1-211ENST00000471260 PROSER1Q86XN7 944 aa13.67□□□□□ -0.22
HMGN1-211ENST00000471260 CACTIN-AS1Q8N1I8 211 aa13.67□□□□□ -0.22
HMGN1-211ENST00000471260 PDCD7Q8N8D1 485 aaKnown RBP13.67□□□□□ -0.22
HMGN1-211ENST00000471260 OR6K2Q8NGY2 324 aa13.67□□□□□ -0.22
HMGN1-211ENST00000471260 ZNF592Q92610 1267 aa13.67□□□□□ -0.22
HMGN1-211ENST00000471260 VOPP1Q96AW1 172 aa13.67□□□□□ -0.22
HMGN1-211ENST00000471260 BMFQ96LC9 184 aa13.67□□□□□ -0.22
HMGN1-211ENST00000471260 KLHL32Q96NJ5 620 aa13.67□□□□□ -0.22
HMGN1-211ENST00000471260 MYOCQ99972 504 aa13.67□□□□□ -0.22
HMGN1-211ENST00000471260 TUBB2BQ9BVA1 445 aa13.67□□□□□ -0.22
HMGN1-211ENST00000471260 C1QTNF7Q9BXJ2 289 aa13.67□□□□□ -0.22
HMGN1-211ENST00000471260 CALN1Q9BXU9 219 aa13.67□□□□□ -0.22
HMGN1-211ENST00000471260 DHX35Q9H5Z1 703 aaKnown RBP13.67□□□□□ -0.22
HMGN1-211ENST00000471260 UBA2Q9UBT2 640 aaPredicted RBP13.67□□□□□ -0.22
HMGN1-211ENST00000471260 FRYQ5TBA9 3013 aa13.67□□□□□ -0.22
HMGN1-211ENST00000471260 GOLGA4Q13439 2230 aaKnown RBP13.66□□□□□ -0.22
HMGN1-211ENST00000471260 SPTY2D1-AS1A0A0U1RR47 76 aa13.66□□□□□ -0.22
HMGN1-211ENST00000471260 IGLON5A6NGN9 336 aa13.66□□□□□ -0.22
HMGN1-211ENST00000471260 ARHGAP42A6NI28 874 aa13.66□□□□□ -0.22
HMGN1-211ENST00000471260 DAPK3O43293 454 aa13.66□□□□□ -0.22
HMGN1-211ENST00000471260 PRAMEF11O60813 436 aa13.66□□□□□ -0.22
HMGN1-211ENST00000471260 ALPPL2P10696 532 aa13.66□□□□□ -0.22
HMGN1-211ENST00000471260 ACP1P24666 158 aa13.66□□□□□ -0.22
HMGN1-211ENST00000471260 MIPP30301 263 aa13.66□□□□□ -0.22
HMGN1-211ENST00000471260 PBX1P40424 430 aa13.66□□□□□ -0.22
HMGN1-211ENST00000471260 CSNK1DP48730 415 aa13.66□□□□□ -0.22
HMGN1-211ENST00000471260 CLDN2P57739 230 aa13.66□□□□□ -0.22
HMGN1-211ENST00000471260 HNRNPKP61978 463 aaKnown RBP eCLIP13.66□□□□□ -0.22
HMGN1-211ENST00000471260 TUBB4BP68371 445 aa13.66□□□□□ -0.22
HMGN1-211ENST00000471260 ELP6Q0PNE2 266 aa13.66□□□□□ -0.22
HMGN1-211ENST00000471260 RFTN1Q14699 578 aaPredicted RBP13.66□□□□□ -0.22
HMGN1-211ENST00000471260 CYTH1Q15438 398 aa13.66□□□□□ -0.22
HMGN1-211ENST00000471260 PROX2Q3B8N5 592 aa13.66□□□□□ -0.22
HMGN1-211ENST00000471260 ATXN7L2Q5T6C5 722 aaPredicted RBP13.66□□□□□ -0.22
HMGN1-211ENST00000471260 RFX8Q6ZV50 586 aa13.66□□□□□ -0.22
HMGN1-211ENST00000471260 PTAR1Q7Z6K3 402 aaPredicted RBP13.66□□□□□ -0.22
HMGN1-211ENST00000471260 VPS36Q86VN1 386 aa13.66□□□□□ -0.22
HMGN1-211ENST00000471260 SLC22A18ASQ8N1D0 253 aa13.66□□□□□ -0.22
HMGN1-211ENST00000471260 SLC25A45Q8N413 288 aa13.66□□□□□ -0.22
HMGN1-211ENST00000471260 LZTR1Q8N653 840 aa13.66□□□□□ -0.22
HMGN1-211ENST00000471260 ARFGAP1Q8N6T3 406 aa13.66□□□□□ -0.22
HMGN1-211ENST00000471260 OR4C6Q8NH72 309 aa13.66□□□□□ -0.22
HMGN1-211ENST00000471260 ZNF653Q96CK0 615 aa13.66□□□□□ -0.22
HMGN1-211ENST00000471260 ZNF641Q96N77 438 aaPredicted RBP13.66□□□□□ -0.22
HMGN1-211ENST00000471260 TUBGCP5Q96RT8 1024 aa13.66□□□□□ -0.22
HMGN1-211ENST00000471260 KLF6Q99612 283 aaPredicted RBP13.66□□□□□ -0.22
HMGN1-211ENST00000471260 BAG1Q99933 345 aaPredicted RBP13.66□□□□□ -0.22
HMGN1-211ENST00000471260 SNRNP25Q9BV90 132 aaKnown RBP13.66□□□□□ -0.22
HMGN1-211ENST00000471260 DUSP23Q9BVJ7 150 aa13.66□□□□□ -0.22
HMGN1-211ENST00000471260 KLC2Q9H0B6 622 aa13.66□□□□□ -0.22
HMGN1-211ENST00000471260 PDFQ9HBH1 243 aa13.66□□□□□ -0.22
HMGN1-211ENST00000471260 TRMT1Q9NXH9 659 aaKnown RBP13.66□□□□□ -0.22
HMGN1-211ENST00000471260 PCSK1NQ9UHG2 260 aa13.66□□□□□ -0.22
HMGN1-211ENST00000471260 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.66□□□□□ -0.22
HMGN1-211ENST00000471260 IGF2RP11717 2491 aa13.66□□□□□ -0.22
HMGN1-211ENST00000471260 ZFHX4Q86UP3 3567 aa13.66□□□□□ -0.22
HMGN1-211ENST00000471260 POM121BA6NF01 834 aa13.65□□□□□ -0.22
HMGN1-211ENST00000471260 H3BM21 787 aa13.65□□□□□ -0.22
HMGN1-211ENST00000471260 ATMINO43313 823 aaPredicted RBP13.65□□□□□ -0.22
HMGN1-211ENST00000471260 SDC3O75056 442 aa13.65□□□□□ -0.22
HMGN1-211ENST00000471260 LRCH4O75427 683 aa13.65□□□□□ -0.22
HMGN1-211ENST00000471260 PIAS2O75928 621 aa13.65□□□□□ -0.22
HMGN1-211ENST00000471260 TM7SF2O76062 418 aa13.65□□□□□ -0.22
HMGN1-211ENST00000471260 CSF2P04141 144 aa13.65□□□□□ -0.22
HMGN1-211ENST00000471260 JUPP14923 745 aa13.65□□□□□ -0.22
HMGN1-211ENST00000471260 ERCC2P18074 760 aa13.65□□□□□ -0.22
HMGN1-211ENST00000471260 PFN3P60673 137 aa13.65□□□□□ -0.22
HMGN1-211ENST00000471260 YPEL5P62699 121 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms