RNA–Protein interactions for RNA: ENST00000470083.5

LSM2-209, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM2, Length 641 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-209ENST00000470083 CBWD3Q5JTY5 395 aa12.16□□□□□ -0.46
LSM2-209ENST00000470083 CBWD5Q5RIA9 395 aa12.16□□□□□ -0.46
LSM2-209ENST00000470083 TCTN3Q6NUS6 607 aa12.16□□□□□ -0.46
LSM2-209ENST00000470083 SETD3Q86TU7 594 aaPredicted RBP12.16□□□□□ -0.46
LSM2-209ENST00000470083 EFCAB3Q8N7B9 438 aa12.16□□□□□ -0.46
LSM2-209ENST00000470083 TP53I13Q8NBR0 393 aaPredicted RBP12.16□□□□□ -0.46
LSM2-209ENST00000470083 CCDC112Q8NEF3 446 aa12.16□□□□□ -0.46
LSM2-209ENST00000470083 KIAA1143Q96AT1 154 aaPredicted RBP12.16□□□□□ -0.46
LSM2-209ENST00000470083 RBM15Q96T37 977 aaKnown RBP eCLIP12.16□□□□□ -0.46
LSM2-209ENST00000470083 EFHD1Q9BUP0 239 aa12.16□□□□□ -0.46
LSM2-209ENST00000470083 GPN2Q9H9Y4 310 aaPredicted RBP12.16□□□□□ -0.46
LSM2-209ENST00000470083 RDH14Q9HBH5 336 aa12.16□□□□□ -0.46
LSM2-209ENST00000470083 MBNL1Q9NR56 388 aaKnown RBP12.16□□□□□ -0.46
LSM2-209ENST00000470083 DDIT4Q9NX09 232 aa12.16□□□□□ -0.46
LSM2-209ENST00000470083 HS3ST4Q9Y661 456 aa12.16□□□□□ -0.46
LSM2-209ENST00000470083 A0A0D9SEW6 157 aa12.15□□□□□ -0.46
LSM2-209ENST00000470083 AREL1O15033 823 aa12.15□□□□□ -0.46
LSM2-209ENST00000470083 TM7SF2O76062 418 aa12.15□□□□□ -0.46
LSM2-209ENST00000470083 NR1D1P20393 614 aa12.15□□□□□ -0.46
LSM2-209ENST00000470083 HTR1BP28222 390 aa12.15□□□□□ -0.46
LSM2-209ENST00000470083 GPD2P43304 727 aa12.15□□□□□ -0.46
LSM2-209ENST00000470083 DNA2P51530 1060 aa12.15□□□□□ -0.46
LSM2-209ENST00000470083 SRP54P61011 504 aaKnown RBP12.15□□□□□ -0.46
LSM2-209ENST00000470083 CDK17Q00537 523 aa12.15□□□□□ -0.46
LSM2-209ENST00000470083 B4GALNT1Q00973 533 aa12.15□□□□□ -0.46
LSM2-209ENST00000470083 CRTC2Q53ET0 693 aaPredicted RBP12.15□□□□□ -0.46
LSM2-209ENST00000470083 ALFQ53S48 1182 aa12.15□□□□□ -0.46
LSM2-209ENST00000470083 ZNF805Q5CZA5 627 aa12.15□□□□□ -0.46
LSM2-209ENST00000470083 RETSATQ6NUM9 610 aa12.15□□□□□ -0.46
LSM2-209ENST00000470083 RD3Q7Z3Z2 195 aa12.15□□□□□ -0.46
LSM2-209ENST00000470083 RCBTB1Q8NDN9 531 aa12.15□□□□□ -0.46
LSM2-209ENST00000470083 ART4Q93070 314 aa12.15□□□□□ -0.46
LSM2-209ENST00000470083 PAGE5Q96GU1 130 aa12.15□□□□□ -0.46
LSM2-209ENST00000470083 MED15Q96RN5 788 aa12.15□□□□□ -0.46
LSM2-209ENST00000470083 ASPSCR1Q9BZE9 553 aa12.15□□□□□ -0.46
LSM2-209ENST00000470083 ZNF768Q9H5H4 540 aaKnown RBP12.15□□□□□ -0.46
LSM2-209ENST00000470083 THAP9Q9H5L6 903 aa12.15□□□□□ -0.46
LSM2-209ENST00000470083 ZDHHC6Q9H6R6 413 aa12.15□□□□□ -0.46
LSM2-209ENST00000470083 FAM13BQ9NYF5 915 aa12.15□□□□□ -0.46
LSM2-209ENST00000470083 MTMR6Q9Y217 621 aa12.15□□□□□ -0.46
LSM2-209ENST00000470083 DAAM1Q9Y4D1 1078 aa12.15□□□□□ -0.46
LSM2-209ENST00000470083 SETD2Q9BYW2 2564 aaPredicted RBP12.14□□□□□ -0.47
LSM2-209ENST00000470083 SYNJ2BP-COX16A0A087WUM0 186 aa12.14□□□□□ -0.47
LSM2-209ENST00000470083 IGHV5-10-1A0A0J9YXX1 117 aa12.14□□□□□ -0.47
LSM2-209ENST00000470083 MKRN2OSH3BPM6 223 aa12.14□□□□□ -0.47
LSM2-209ENST00000470083 K7EM74 188 aa12.14□□□□□ -0.47
LSM2-209ENST00000470083 RNF225M0QZC1 329 aaPredicted RBP12.14□□□□□ -0.47
LSM2-209ENST00000470083 ACTN4O43707 911 aaKnown RBP12.14□□□□□ -0.47
LSM2-209ENST00000470083 ADCY5O95622 1261 aa12.14□□□□□ -0.47
LSM2-209ENST00000470083 MC1RQ01726 317 aa12.14□□□□□ -0.47
LSM2-209ENST00000470083 SLC20A2Q08357 652 aa12.14□□□□□ -0.47
LSM2-209ENST00000470083 TRA2AQ13595 282 aaKnown RBP eCLIP12.14□□□□□ -0.47
LSM2-209ENST00000470083 CUL4AQ13619 759 aa12.14□□□□□ -0.47
LSM2-209ENST00000470083 NFATC4Q14934 902 aa12.14□□□□□ -0.47
LSM2-209ENST00000470083 IRF4Q15306 451 aa12.14□□□□□ -0.47
LSM2-209ENST00000470083 ZCWPW2Q504Y3 356 aa12.14□□□□□ -0.47
LSM2-209ENST00000470083 ENPP7Q6UWV6 458 aa12.14□□□□□ -0.47
LSM2-209ENST00000470083 ASB18Q6ZVZ8 466 aa12.14□□□□□ -0.47
LSM2-209ENST00000470083 FAM114A1Q8IWE2 563 aa12.14□□□□□ -0.47
LSM2-209ENST00000470083 AGBL5Q8NDL9 886 aa12.14□□□□□ -0.47
LSM2-209ENST00000470083 FAM46DQ8NEK8 389 aa12.14□□□□□ -0.47
LSM2-209ENST00000470083 ATL2Q8NHH9 583 aa12.14□□□□□ -0.47
LSM2-209ENST00000470083 STK32AQ8WU08 396 aa12.14□□□□□ -0.47
LSM2-209ENST00000470083 CCDC74BQ96LY2 380 aa12.14□□□□□ -0.47
LSM2-209ENST00000470083 NUDT22Q9BRQ3 303 aa12.14□□□□□ -0.47
LSM2-209ENST00000470083 SLC4A5Q9BY07 1137 aa12.14□□□□□ -0.47
LSM2-209ENST00000470083 COX16Q9P0S2 106 aa12.14□□□□□ -0.47
LSM2-209ENST00000470083 HECAQ9UBI9 543 aaPredicted RBP12.14□□□□□ -0.47
LSM2-209ENST00000470083 KLQ9UEF7 1012 aa12.14□□□□□ -0.47
LSM2-209ENST00000470083 SERTAD1Q9UHV2 236 aa12.14□□□□□ -0.47
LSM2-209ENST00000470083 PILRAQ9UKJ1 303 aa12.14□□□□□ -0.47
LSM2-209ENST00000470083 KCTD3Q9Y597 815 aa12.14□□□□□ -0.47
LSM2-209ENST00000470083 PCDHB4Q9Y5E5 795 aa12.14□□□□□ -0.47
LSM2-209ENST00000470083 DGKBQ9Y6T7 804 aa12.14□□□□□ -0.47
LSM2-209ENST00000470083 F8P00451 2351 aa12.14□□□□□ -0.47
LSM2-209ENST00000470083 ADGRG4Q8IZF6 3080 aa12.13□□□□□ -0.47
LSM2-209ENST00000470083 TTLL8A6PVC2 850 aa12.13□□□□□ -0.47
LSM2-209ENST00000470083 B4DGG1 531 aa12.13□□□□□ -0.47
LSM2-209ENST00000470083 E5RJQ4 531 aa12.13□□□□□ -0.47
LSM2-209ENST00000470083 B4GAT1O43505 415 aa12.13□□□□□ -0.47
LSM2-209ENST00000470083 MMP20O60882 483 aa12.13□□□□□ -0.47
LSM2-209ENST00000470083 PAGE1O75459 146 aa12.13□□□□□ -0.47
LSM2-209ENST00000470083 ZMPSTE24O75844 475 aa12.13□□□□□ -0.47
LSM2-209ENST00000470083 CLDN1O95832 211 aa12.13□□□□□ -0.47
LSM2-209ENST00000470083 CALCAP01258 141 aa12.13□□□□□ -0.47
LSM2-209ENST00000470083 MYL1P05976 194 aa12.13□□□□□ -0.47
LSM2-209ENST00000470083 EPB41P11171 864 aaKnown RBP12.13□□□□□ -0.47
LSM2-209ENST00000470083 MAP4P27816 1152 aaKnown RBP12.13□□□□□ -0.47
LSM2-209ENST00000470083 COPB1P53618 953 aaKnown RBP12.13□□□□□ -0.47
LSM2-209ENST00000470083 RAB15P59190 212 aa12.13□□□□□ -0.47
LSM2-209ENST00000470083 LRMPQ12912 555 aa12.13□□□□□ -0.47
LSM2-209ENST00000470083 TAF5Q15542 800 aa12.13□□□□□ -0.47
LSM2-209ENST00000470083 KLHL40Q2TBA0 621 aa12.13□□□□□ -0.47
LSM2-209ENST00000470083 EDRF1Q3B7T1 1238 aa12.13□□□□□ -0.47
LSM2-209ENST00000470083 AMZ1Q400G9 498 aa12.13□□□□□ -0.47
LSM2-209ENST00000470083 RESP18Q5W5W9 173 aa12.13□□□□□ -0.47
LSM2-209ENST00000470083 ZNF438Q7Z4V0 828 aa12.13□□□□□ -0.47
LSM2-209ENST00000470083 TAF8Q7Z7C8 310 aa12.13□□□□□ -0.47
LSM2-209ENST00000470083 TMEM110Q86TL2 294 aa12.13□□□□□ -0.47
LSM2-209ENST00000470083 SFTPA2Q8IWL1 248 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms