RNA–Protein interactions for RNA: ENST00000469744.1

MRPL28-208, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 1 (best)

Gene MRPL28, Length 1,467 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-208ENST00000469744 TFDP3Q5H9I0 405 aa17.92■□□□□ 0.46
MRPL28-208ENST00000469744 ARTNQ5T4W7 220 aa17.92■□□□□ 0.46
MRPL28-208ENST00000469744 MFSD7Q6UXD7 560 aa17.92■□□□□ 0.46
MRPL28-208ENST00000469744 TRMT10CQ7L0Y3 403 aaKnown RBP17.92■□□□□ 0.46
MRPL28-208ENST00000469744 ARFGAP2Q8N6H7 521 aa17.92■□□□□ 0.46
MRPL28-208ENST00000469744 FRS2Q8WU20 508 aa17.92■□□□□ 0.46
MRPL28-208ENST00000469744 RNF25Q96BH1 459 aaPredicted RBP17.92■□□□□ 0.46
MRPL28-208ENST00000469744 SLC25A13Q9UJS0 675 aa17.92■□□□□ 0.46
MRPL28-208ENST00000469744 TBC1D30Q9Y2I9 924 aa17.92■□□□□ 0.46
MRPL28-208ENST00000469744 R3HDM2Q9Y2K5 976 aaKnown RBP17.92■□□□□ 0.46
MRPL28-208ENST00000469744 ZBTB32Q9Y2Y4 487 aaPredicted RBP17.92■□□□□ 0.46
MRPL28-208ENST00000469744 PLXNA2O75051 1894 aa17.92■□□□□ 0.46
MRPL28-208ENST00000469744 BCAT2O15382 392 aaPredicted RBP17.91■□□□□ 0.46
MRPL28-208ENST00000469744 RNASEH2AO75792 299 aaKnown RBP17.91■□□□□ 0.46
MRPL28-208ENST00000469744 SYPP08247 313 aa17.91■□□□□ 0.46
MRPL28-208ENST00000469744 SDC4P31431 198 aa17.91■□□□□ 0.46
MRPL28-208ENST00000469744 SLC8A1P32418 973 aa17.91■□□□□ 0.46
MRPL28-208ENST00000469744 CDKN2BP42772 138 aa17.91■□□□□ 0.46
MRPL28-208ENST00000469744 SNX1Q13596 522 aa17.91■□□□□ 0.46
MRPL28-208ENST00000469744 LRRC31Q6UY01 552 aa17.91■□□□□ 0.46
MRPL28-208ENST00000469744 ARCQ7LC44 396 aa17.91■□□□□ 0.46
MRPL28-208ENST00000469744 HOOK3Q86VS8 718 aa17.91■□□□□ 0.46
MRPL28-208ENST00000469744 AADATQ8N5Z0 425 aa17.91■□□□□ 0.46
MRPL28-208ENST00000469744 TTC13Q8NBP0 860 aa17.91■□□□□ 0.46
MRPL28-208ENST00000469744 BIRC7Q96CA5 298 aa17.91■□□□□ 0.46
MRPL28-208ENST00000469744 HEMGNQ9BXL5 484 aa17.91■□□□□ 0.46
MRPL28-208ENST00000469744 MAGEB5Q9BZ81 275 aa17.91■□□□□ 0.46
MRPL28-208ENST00000469744 ASIC3Q9UHC3 531 aa17.91■□□□□ 0.46
MRPL28-208ENST00000469744 NCKAP1Q9Y2A7 1128 aa17.91■□□□□ 0.46
MRPL28-208ENST00000469744 ATP8A1Q9Y2Q0 1164 aa17.91■□□□□ 0.46
MRPL28-208ENST00000469744 A0A0D9SEW6 157 aa17.9■□□□□ 0.46
MRPL28-208ENST00000469744 C2CD4BA6NLJ0 364 aa17.9■□□□□ 0.46
MRPL28-208ENST00000469744 DRGXA6NNA5 263 aa17.9■□□□□ 0.46
MRPL28-208ENST00000469744 PLK4O00444 970 aa17.9■□□□□ 0.46
MRPL28-208ENST00000469744 LIASO43766 372 aa17.9■□□□□ 0.46
MRPL28-208ENST00000469744 BNIP3LO60238 219 aa17.9■□□□□ 0.46
MRPL28-208ENST00000469744 OPHN1O60890 802 aa17.9■□□□□ 0.46
MRPL28-208ENST00000469744 LRCH4O75427 683 aa17.9■□□□□ 0.46
MRPL28-208ENST00000469744 RNF8O76064 485 aa17.9■□□□□ 0.46
MRPL28-208ENST00000469744 MT-CO1P00395 513 aa17.9■□□□□ 0.46
MRPL28-208ENST00000469744 IL1BP01584 269 aa17.9■□□□□ 0.46
MRPL28-208ENST00000469744 ZNF143P52747 638 aaPredicted RBP17.9■□□□□ 0.46
MRPL28-208ENST00000469744 DENND2CQ68D51 928 aa17.9■□□□□ 0.46
MRPL28-208ENST00000469744 LAYNQ6UX15 382 aa17.9■□□□□ 0.46
MRPL28-208ENST00000469744 LEKR1Q6ZMV7 388 aa17.9■□□□□ 0.46
MRPL28-208ENST00000469744 Q6ZVU0 165 aa17.9■□□□□ 0.46
MRPL28-208ENST00000469744 USP30Q70CQ3 517 aa17.9■□□□□ 0.46
MRPL28-208ENST00000469744 HDDC3Q8N4P3 179 aa17.9■□□□□ 0.46
MRPL28-208ENST00000469744 C1orf216Q8TAB5 229 aa17.9■□□□□ 0.46
MRPL28-208ENST00000469744 ATG4AQ8WYN0 398 aa17.9■□□□□ 0.46
MRPL28-208ENST00000469744 C1orf74Q96LT6 269 aa17.9■□□□□ 0.46
MRPL28-208ENST00000469744 HAPLN3Q96S86 360 aa17.9■□□□□ 0.46
MRPL28-208ENST00000469744 OMDQ99983 421 aa17.9■□□□□ 0.46
MRPL28-208ENST00000469744 CNPY3Q9BT09 278 aa17.9■□□□□ 0.46
MRPL28-208ENST00000469744 PCED1AQ9H1Q7 454 aa17.9■□□□□ 0.46
MRPL28-208ENST00000469744 EPB41L4BQ9H329 900 aa17.9■□□□□ 0.46
MRPL28-208ENST00000469744 SGK2Q9HBY8 427 aa17.9■□□□□ 0.46
MRPL28-208ENST00000469744 VPS51Q9UID3 782 aa17.9■□□□□ 0.46
MRPL28-208ENST00000469744 PCNX2A6NKB5 2137 aa17.9■□□□□ 0.46
MRPL28-208ENST00000469744 IGLV3-10A0A075B6K4 115 aa17.89■□□□□ 0.45
MRPL28-208ENST00000469744 C3orf70A6NLC5 250 aaPredicted RBP17.89■□□□□ 0.45
MRPL28-208ENST00000469744 ENDOD1O94919 500 aa17.89■□□□□ 0.45
MRPL28-208ENST00000469744 TCF4P15884 667 aa17.89■□□□□ 0.45
MRPL28-208ENST00000469744 GPD1P21695 349 aa17.89■□□□□ 0.45
MRPL28-208ENST00000469744 GLDCP23378 1020 aa17.89■□□□□ 0.45
MRPL28-208ENST00000469744 OR1E1P30953 314 aa17.89■□□□□ 0.45
MRPL28-208ENST00000469744 GJC1P36383 396 aa17.89■□□□□ 0.45
MRPL28-208ENST00000469744 CSNK1EP49674 416 aaKnown RBP17.89■□□□□ 0.45
MRPL28-208ENST00000469744 ELAVL3Q14576 367 aaKnown RBP17.89■□□□□ 0.45
MRPL28-208ENST00000469744 DLG2Q15700 870 aa17.89■□□□□ 0.45
MRPL28-208ENST00000469744 POM121L1PQ3SYA9 428 aa17.89■□□□□ 0.45
MRPL28-208ENST00000469744 ATP13A4Q4VNC1 1196 aa17.89■□□□□ 0.45
MRPL28-208ENST00000469744 NCEH1Q6PIU2 408 aa17.89■□□□□ 0.45
MRPL28-208ENST00000469744 LINGO4Q6UY18 593 aa17.89■□□□□ 0.45
MRPL28-208ENST00000469744 SH2D3CQ8N5H7 860 aa17.89■□□□□ 0.45
MRPL28-208ENST00000469744 ARFGAP1Q8N6T3 406 aa17.89■□□□□ 0.45
MRPL28-208ENST00000469744 OR7D4Q8NG98 312 aa17.89■□□□□ 0.45
MRPL28-208ENST00000469744 ZBTB9Q96C00 473 aa17.89■□□□□ 0.45
MRPL28-208ENST00000469744 CAPS2Q9BXY5 557 aa17.89■□□□□ 0.45
MRPL28-208ENST00000469744 SCML1Q9UN30 329 aa17.89■□□□□ 0.45
MRPL28-208ENST00000469744 TMEM131Q92545 1883 aa17.89■□□□□ 0.45
MRPL28-208ENST00000469744 TP53BP1Q12888 1972 aaPredicted RBP17.89■□□□□ 0.45
MRPL28-208ENST00000469744 A0A1B0GVT2 93 aa17.88■□□□□ 0.45
MRPL28-208ENST00000469744 SRRM3A6NNA2 597 aaPredicted RBP17.88■□□□□ 0.45
MRPL28-208ENST00000469744 K7ERQ8 282 aa17.88■□□□□ 0.45
MRPL28-208ENST00000469744 ATP9BO43861 1147 aa17.88■□□□□ 0.45
MRPL28-208ENST00000469744 IGHV4-34P06331 123 aa17.88■□□□□ 0.45
MRPL28-208ENST00000469744 ITGAVP06756 1048 aa17.88■□□□□ 0.45
MRPL28-208ENST00000469744 CSRP1P21291 193 aaKnown RBP17.88■□□□□ 0.45
MRPL28-208ENST00000469744 BNC1Q01954 994 aa17.88■□□□□ 0.45
MRPL28-208ENST00000469744 SEMA3BQ13214 749 aa17.88■□□□□ 0.45
MRPL28-208ENST00000469744 ZFYVE27Q5T4F4 411 aa17.88■□□□□ 0.45
MRPL28-208ENST00000469744 RELL1Q8IUW5 271 aa17.88■□□□□ 0.45
MRPL28-208ENST00000469744 CCDC185Q8N715 623 aa17.88■□□□□ 0.45
MRPL28-208ENST00000469744 FAM172AQ8WUF8 416 aa17.88■□□□□ 0.45
MRPL28-208ENST00000469744 RAPGEF5Q92565 580 aa17.88■□□□□ 0.45
MRPL28-208ENST00000469744 CCDC114Q96M63 670 aa17.88■□□□□ 0.45
MRPL28-208ENST00000469744 IL21RQ9HBE5 538 aa17.88■□□□□ 0.45
MRPL28-208ENST00000469744 SARDHQ9UL12 918 aa17.88■□□□□ 0.45
MRPL28-208ENST00000469744 LRRD1A4D1F6 860 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms