RNA–Protein interactions for RNA: ENST00000468040.2

SNIP1-202, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 5

Gene SNIP1, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-202ENST00000468040 TADA1Q96BN2 335 aa15.37■□□□□ 0.05
SNIP1-202ENST00000468040 LRRC45Q96CN5 670 aa15.37■□□□□ 0.05
SNIP1-202ENST00000468040 KRT12Q99456 494 aa15.37■□□□□ 0.05
SNIP1-202ENST00000468040 SUV39H2Q9H5I1 410 aa15.37■□□□□ 0.05
SNIP1-202ENST00000468040 GOLGA6AQ9NYA3 693 aa15.37■□□□□ 0.05
SNIP1-202ENST00000468040 EBF1Q9UH73 591 aa15.37■□□□□ 0.05
SNIP1-202ENST00000468040 FAM153AQ9UHL3 310 aa15.37■□□□□ 0.05
SNIP1-202ENST00000468040 TTC24A2A3L6 582 aaPredicted RBP15.36■□□□□ 0.05
SNIP1-202ENST00000468040 CTAGE15A4D2H0 777 aa15.36■□□□□ 0.05
SNIP1-202ENST00000468040 K7ESF4 209 aa15.36■□□□□ 0.05
SNIP1-202ENST00000468040 PIGNO95427 931 aa15.36■□□□□ 0.05
SNIP1-202ENST00000468040 KRT14P02533 472 aa15.36■□□□□ 0.05
SNIP1-202ENST00000468040 MMP2P08253 660 aa15.36■□□□□ 0.05
SNIP1-202ENST00000468040 ZSCAN5DPP0CG00 497 aa15.36■□□□□ 0.05
SNIP1-202ENST00000468040 CTAGE8P0CG41 777 aa15.36■□□□□ 0.05
SNIP1-202ENST00000468040 ACADMP11310 421 aa15.36■□□□□ 0.05
SNIP1-202ENST00000468040 ETS1P14921 441 aa15.36■□□□□ 0.05
SNIP1-202ENST00000468040 PSMB4P28070 264 aa15.36■□□□□ 0.05
SNIP1-202ENST00000468040 HOXD11P31277 338 aaPredicted RBP15.36■□□□□ 0.05
SNIP1-202ENST00000468040 SLC8A1P32418 973 aa15.36■□□□□ 0.05
SNIP1-202ENST00000468040 RPL22P35268 128 aaKnown RBP15.36■□□□□ 0.05
SNIP1-202ENST00000468040 FDFT1P37268 417 aa15.36■□□□□ 0.05
SNIP1-202ENST00000468040 TNNT3P45378 269 aaPredicted RBP15.36■□□□□ 0.05
SNIP1-202ENST00000468040 NUBP1P53384 320 aa15.36■□□□□ 0.05
SNIP1-202ENST00000468040 GEMP55040 296 aa15.36■□□□□ 0.05
SNIP1-202ENST00000468040 MPP3Q13368 585 aa15.36■□□□□ 0.05
SNIP1-202ENST00000468040 BRAT1Q6PJG6 821 aa15.36■□□□□ 0.05
SNIP1-202ENST00000468040 MAATS1Q7Z4T9 603 aa15.36■□□□□ 0.05
SNIP1-202ENST00000468040 PRPF39Q86UA1 669 aaKnown RBP15.36■□□□□ 0.05
SNIP1-202ENST00000468040 CTAGE6Q86UF2 777 aa15.36■□□□□ 0.05
SNIP1-202ENST00000468040 CACUL1Q86Y37 369 aa15.36■□□□□ 0.05
SNIP1-202ENST00000468040 CAMK1DQ8IU85 385 aa15.36■□□□□ 0.05
SNIP1-202ENST00000468040 CTAGE4Q8IX94 777 aa15.36■□□□□ 0.05
SNIP1-202ENST00000468040 PAF1Q8N7H5 531 aa15.36■□□□□ 0.05
SNIP1-202ENST00000468040 GLIS1Q8NBF1 620 aa15.36■□□□□ 0.05
SNIP1-202ENST00000468040 SPATA22Q8NHS9 363 aa15.36■□□□□ 0.05
SNIP1-202ENST00000468040 SPOCK2Q92563 424 aa15.36■□□□□ 0.05
SNIP1-202ENST00000468040 VOPP1Q96AW1 172 aa15.36■□□□□ 0.05
SNIP1-202ENST00000468040 ECHDC3Q96DC8 303 aa15.36■□□□□ 0.05
SNIP1-202ENST00000468040 RBM15Q96T37 977 aaKnown RBP eCLIP15.36■□□□□ 0.05
SNIP1-202ENST00000468040 TDRD1Q9BXT4 1180 aaKnown RBP15.36■□□□□ 0.05
SNIP1-202ENST00000468040 PABPC3Q9H361 631 aaKnown RBP15.36■□□□□ 0.05
SNIP1-202ENST00000468040 L2HGDHQ9H9P8 463 aa15.36■□□□□ 0.05
SNIP1-202ENST00000468040 DKK3Q9UBP4 350 aa15.36■□□□□ 0.05
SNIP1-202ENST00000468040 SARDHQ9UL12 918 aa15.36■□□□□ 0.05
SNIP1-202ENST00000468040 NEU2Q9Y3R4 380 aa15.36■□□□□ 0.05
SNIP1-202ENST00000468040 ARIH1Q9Y4X5 557 aaPredicted RBP15.36■□□□□ 0.05
SNIP1-202ENST00000468040 RAI2Q9Y5P3 530 aa15.36■□□□□ 0.05
SNIP1-202ENST00000468040 ERI2A8K979 691 aaKnown RBP15.35■□□□□ 0.05
SNIP1-202ENST00000468040 TRAFD1O14545 582 aaPredicted RBP15.35■□□□□ 0.05
SNIP1-202ENST00000468040 MID1O15344 667 aa15.35■□□□□ 0.05
SNIP1-202ENST00000468040 PSMD3O43242 534 aa15.35■□□□□ 0.05
SNIP1-202ENST00000468040 HTRA2O43464 458 aaPredicted RBP15.35■□□□□ 0.05
SNIP1-202ENST00000468040 METTL18O95568 372 aa15.35■□□□□ 0.05
SNIP1-202ENST00000468040 MT-CYBP00156 380 aaPredicted RBP15.35■□□□□ 0.05
SNIP1-202ENST00000468040 PTGIRP43119 386 aa15.35■□□□□ 0.05
SNIP1-202ENST00000468040 RPL26P61254 145 aaKnown RBP15.35■□□□□ 0.05
SNIP1-202ENST00000468040 POLR2LP62875 67 aaKnown RBP15.35■□□□□ 0.05
SNIP1-202ENST00000468040 PTK6Q13882 451 aa15.35■□□□□ 0.05
SNIP1-202ENST00000468040 FAM182AQ5T1J6 154 aa15.35■□□□□ 0.05
SNIP1-202ENST00000468040 ARMC12Q5T9G4 340 aa15.35■□□□□ 0.05
SNIP1-202ENST00000468040 USP30Q70CQ3 517 aa15.35■□□□□ 0.05
SNIP1-202ENST00000468040 KBTBD6Q86V97 674 aa15.35■□□□□ 0.05
SNIP1-202ENST00000468040 KLHL32Q96NJ5 620 aa15.35■□□□□ 0.05
SNIP1-202ENST00000468040 OMDQ99983 421 aa15.35■□□□□ 0.05
SNIP1-202ENST00000468040 FSD1LQ9BXM9 530 aa15.35■□□□□ 0.05
SNIP1-202ENST00000468040 ADGRE3Q9BY15 652 aa15.35■□□□□ 0.05
SNIP1-202ENST00000468040 HDAC8Q9BY41 377 aa15.35■□□□□ 0.05
SNIP1-202ENST00000468040 SLC6A17Q9H1V8 727 aa15.35■□□□□ 0.05
SNIP1-202ENST00000468040 RAB6BQ9NRW1 208 aa15.35■□□□□ 0.05
SNIP1-202ENST00000468040 FBXO4Q9UKT5 387 aa15.35■□□□□ 0.05
SNIP1-202ENST00000468040 RPL26L1Q9UNX3 145 aaKnown RBP15.35■□□□□ 0.05
SNIP1-202ENST00000468040 NCKAP1Q9Y2A7 1128 aa15.35■□□□□ 0.05
SNIP1-202ENST00000468040 PCDHGC4Q9Y5F7 938 aa15.35■□□□□ 0.05
SNIP1-202ENST00000468040 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP15.34■□□□□ 0.05
SNIP1-202ENST00000468040 CCDC163A0A0D9SF12 145 aa15.34■□□□□ 0.05
SNIP1-202ENST00000468040 TSPAN11A1L157 253 aa15.34■□□□□ 0.05
SNIP1-202ENST00000468040 FAM187AA6NFU0 413 aa15.34■□□□□ 0.05
SNIP1-202ENST00000468040 E7EVH7 732 aa15.34■□□□□ 0.05
SNIP1-202ENST00000468040 F5H423 210 aaPredicted RBP15.34■□□□□ 0.05
SNIP1-202ENST00000468040 ZNF217O75362 1048 aa15.34■□□□□ 0.05
SNIP1-202ENST00000468040 PMPCBO75439 489 aa15.34■□□□□ 0.05
SNIP1-202ENST00000468040 PGLSO95336 258 aa15.34■□□□□ 0.05
SNIP1-202ENST00000468040 EPOP01588 193 aa15.34■□□□□ 0.05
SNIP1-202ENST00000468040 NFKBIAP25963 317 aa15.34■□□□□ 0.05
SNIP1-202ENST00000468040 SUOXP51687 545 aa15.34■□□□□ 0.05
SNIP1-202ENST00000468040 NEK3P51956 506 aa15.34■□□□□ 0.05
SNIP1-202ENST00000468040 WNT3AP56704 352 aa15.34■□□□□ 0.05
SNIP1-202ENST00000468040 TRAF2Q12933 501 aa15.34■□□□□ 0.05
SNIP1-202ENST00000468040 GPS1Q13098 491 aa15.34■□□□□ 0.05
SNIP1-202ENST00000468040 SEMA5AQ13591 1074 aa15.34■□□□□ 0.05
SNIP1-202ENST00000468040 IHHQ14623 411 aa15.34■□□□□ 0.05
SNIP1-202ENST00000468040 TRIP13Q15645 432 aaPredicted RBP15.34■□□□□ 0.05
SNIP1-202ENST00000468040 PCSK7Q16549 785 aa15.34■□□□□ 0.05
SNIP1-202ENST00000468040 POM121L1PQ3SYA9 428 aa15.34■□□□□ 0.05
SNIP1-202ENST00000468040 FBXL19Q6PCT2 694 aa15.34■□□□□ 0.05
SNIP1-202ENST00000468040 ERN2Q76MJ5 926 aaKnown RBP15.34■□□□□ 0.05
SNIP1-202ENST00000468040 PRUNE1Q86TP1 453 aa15.34■□□□□ 0.05
SNIP1-202ENST00000468040 JAMLQ86YT9 394 aa15.34■□□□□ 0.05
SNIP1-202ENST00000468040 KLHDC8BQ8IXV7 354 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms