RNA–Protein interactions for RNA: ENST00000467533.5

HDAC3-203, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 663 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-203ENST00000467533 ERRFI1Q9UJM3 462 aaPredicted RBP10.38□□□□□ -0.75
HDAC3-203ENST00000467533 PILRAQ9UKJ1 303 aa10.38□□□□□ -0.75
HDAC3-203ENST00000467533 MAP4K5Q9Y4K4 846 aa10.38□□□□□ -0.75
HDAC3-203ENST00000467533 ADGRG4Q8IZF6 3080 aa10.38□□□□□ -0.75
HDAC3-203ENST00000467533 HIVEP3Q5T1R4 2406 aa10.37□□□□□ -0.75
HDAC3-203ENST00000467533 APCP25054 2843 aa10.37□□□□□ -0.75
HDAC3-203ENST00000467533 TCP11X1B4DZS4 312 aa10.37□□□□□ -0.75
HDAC3-203ENST00000467533 PDXKO00764 312 aa10.37□□□□□ -0.75
HDAC3-203ENST00000467533 MAPK13O15264 365 aa10.37□□□□□ -0.75
HDAC3-203ENST00000467533 SART1O43290 800 aaKnown RBP10.37□□□□□ -0.75
HDAC3-203ENST00000467533 HNRNPRO43390 633 aaKnown RBP10.37□□□□□ -0.75
HDAC3-203ENST00000467533 CALUO43852 315 aaPredicted RBP10.37□□□□□ -0.75
HDAC3-203ENST00000467533 CLDN11O75508 207 aa10.37□□□□□ -0.75
HDAC3-203ENST00000467533 TM7SF2O76062 418 aa10.37□□□□□ -0.75
HDAC3-203ENST00000467533 ADCY5O95622 1261 aa10.37□□□□□ -0.75
HDAC3-203ENST00000467533 TRUB2O95900 331 aaKnown RBP10.37□□□□□ -0.75
HDAC3-203ENST00000467533 TNFP01375 233 aa10.37□□□□□ -0.75
HDAC3-203ENST00000467533 PRF1P14222 555 aa10.37□□□□□ -0.75
HDAC3-203ENST00000467533 ALDH4A1P30038 563 aa10.37□□□□□ -0.75
HDAC3-203ENST00000467533 MXI1P50539 228 aa10.37□□□□□ -0.75
HDAC3-203ENST00000467533 OR1D5P58170 312 aa10.37□□□□□ -0.75
HDAC3-203ENST00000467533 RAB15P59190 212 aa10.37□□□□□ -0.75
HDAC3-203ENST00000467533 SRP54P61011 504 aaKnown RBP10.37□□□□□ -0.75
HDAC3-203ENST00000467533 B4GALNT1Q00973 533 aa10.37□□□□□ -0.75
HDAC3-203ENST00000467533 ABHD18Q0P651 414 aa10.37□□□□□ -0.75
HDAC3-203ENST00000467533 TRA2AQ13595 282 aaKnown RBP eCLIP10.37□□□□□ -0.75
HDAC3-203ENST00000467533 NFATC4Q14934 902 aa10.37□□□□□ -0.75
HDAC3-203ENST00000467533 IRF4Q15306 451 aa10.37□□□□□ -0.75
HDAC3-203ENST00000467533 CRTC2Q53ET0 693 aaPredicted RBP10.37□□□□□ -0.75
HDAC3-203ENST00000467533 SPECC1LQ69YQ0 1117 aa10.37□□□□□ -0.75
HDAC3-203ENST00000467533 FAM173BQ6P4H8 233 aa10.37□□□□□ -0.75
HDAC3-203ENST00000467533 LCLAT1Q6UWP7 414 aa10.37□□□□□ -0.75
HDAC3-203ENST00000467533 NYAP1Q6ZVC0 841 aa10.37□□□□□ -0.75
HDAC3-203ENST00000467533 FAM186BQ8IYM0 893 aa10.37□□□□□ -0.75
HDAC3-203ENST00000467533 IQUBQ8NA54 791 aa10.37□□□□□ -0.75
HDAC3-203ENST00000467533 DCAF4L2Q8NA75 395 aa10.37□□□□□ -0.75
HDAC3-203ENST00000467533 TP53I13Q8NBR0 393 aaPredicted RBP10.37□□□□□ -0.75
HDAC3-203ENST00000467533 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.37□□□□□ -0.75
HDAC3-203ENST00000467533 KIAA0895Q8NCT3 520 aa10.37□□□□□ -0.75
HDAC3-203ENST00000467533 FBXL13Q8NEE6 735 aa10.37□□□□□ -0.75
HDAC3-203ENST00000467533 ATL2Q8NHH9 583 aa10.37□□□□□ -0.75
HDAC3-203ENST00000467533 CXorf40AQ8TE69 158 aa10.37□□□□□ -0.75
HDAC3-203ENST00000467533 TMEM174Q8WUU8 243 aa10.37□□□□□ -0.75
HDAC3-203ENST00000467533 ARHGEF26Q96DR7 871 aa10.37□□□□□ -0.75
HDAC3-203ENST00000467533 PDXPQ96GD0 296 aa10.37□□□□□ -0.75
HDAC3-203ENST00000467533 C5orf34Q96MH7 638 aa10.37□□□□□ -0.75
HDAC3-203ENST00000467533 RBM15Q96T37 977 aaKnown RBP eCLIP10.37□□□□□ -0.75
HDAC3-203ENST00000467533 TRIM62Q9BVG3 475 aa10.37□□□□□ -0.75
HDAC3-203ENST00000467533 DPEP2Q9H4A9 486 aa10.37□□□□□ -0.75
HDAC3-203ENST00000467533 MAGEF1Q9HAY2 307 aa10.37□□□□□ -0.75
HDAC3-203ENST00000467533 CYP4F12Q9HCS2 524 aa10.37□□□□□ -0.75
HDAC3-203ENST00000467533 RAB20Q9NX57 234 aa10.37□□□□□ -0.75
HDAC3-203ENST00000467533 TLK1Q9UKI8 766 aa10.37□□□□□ -0.75
HDAC3-203ENST00000467533 POLHQ9Y253 713 aa10.37□□□□□ -0.75
HDAC3-203ENST00000467533 PCDHB3Q9Y5E6 796 aa10.37□□□□□ -0.75
HDAC3-203ENST00000467533 MRPS18BQ9Y676 258 aaKnown RBP10.37□□□□□ -0.75
HDAC3-203ENST00000467533 OAS3Q9Y6K5 1087 aaKnown RBP10.37□□□□□ -0.75
HDAC3-203ENST00000467533 PVALEFA0A1B0GWK0 134 aa10.36□□□□□ -0.75
HDAC3-203ENST00000467533 C16orf96A6NNT2 1141 aa10.36□□□□□ -0.75
HDAC3-203ENST00000467533 TMEM110-MUSTN1A8MSY1 372 aa10.36□□□□□ -0.75
HDAC3-203ENST00000467533 RHPN2P1A8MT19 583 aa10.36□□□□□ -0.75
HDAC3-203ENST00000467533 ZW10O43264 779 aa10.36□□□□□ -0.75
HDAC3-203ENST00000467533 B4GAT1O43505 415 aa10.36□□□□□ -0.75
HDAC3-203ENST00000467533 MMP20O60882 483 aa10.36□□□□□ -0.75
HDAC3-203ENST00000467533 PDGFAP04085 211 aa10.36□□□□□ -0.75
HDAC3-203ENST00000467533 SLC2A3P11169 496 aa10.36□□□□□ -0.75
HDAC3-203ENST00000467533 PDIA4P13667 645 aaKnown RBP10.36□□□□□ -0.75
HDAC3-203ENST00000467533 NR2F2P24468 414 aa10.36□□□□□ -0.75
HDAC3-203ENST00000467533 NOP2P46087 812 aaKnown RBP10.36□□□□□ -0.75
HDAC3-203ENST00000467533 PEX5P50542 639 aa10.36□□□□□ -0.75
HDAC3-203ENST00000467533 LIMK2P53671 638 aa10.36□□□□□ -0.75
HDAC3-203ENST00000467533 CDH4P55283 916 aa10.36□□□□□ -0.75
HDAC3-203ENST00000467533 PITX1P78337 314 aaPredicted RBP10.36□□□□□ -0.75
HDAC3-203ENST00000467533 BIRC2Q13490 618 aa10.36□□□□□ -0.75
HDAC3-203ENST00000467533 CUL2Q13617 745 aa10.36□□□□□ -0.75
HDAC3-203ENST00000467533 CUL4BQ13620 913 aa10.36□□□□□ -0.75
HDAC3-203ENST00000467533 AUHQ13825 339 aaKnown RBP10.36□□□□□ -0.75
HDAC3-203ENST00000467533 CLPPQ16740 277 aaPredicted RBP10.36□□□□□ -0.75
HDAC3-203ENST00000467533 KLHL40Q2TBA0 621 aa10.36□□□□□ -0.75
HDAC3-203ENST00000467533 NADK2Q4G0N4 442 aa10.36□□□□□ -0.75
HDAC3-203ENST00000467533 PRR30Q53SZ7 412 aaPredicted RBP10.36□□□□□ -0.75
HDAC3-203ENST00000467533 CARD16Q5EG05 197 aa10.36□□□□□ -0.75
HDAC3-203ENST00000467533 LRRC73Q5JTD7 316 aa10.36□□□□□ -0.75
HDAC3-203ENST00000467533 OGFOD3Q6PK18 319 aa10.36□□□□□ -0.75
HDAC3-203ENST00000467533 RYBPQ8N488 228 aaPredicted RBP10.36□□□□□ -0.75
HDAC3-203ENST00000467533 PCDH20Q8N6Y1 951 aaKnown RBP10.36□□□□□ -0.75
HDAC3-203ENST00000467533 TTC13Q8NBP0 860 aa10.36□□□□□ -0.75
HDAC3-203ENST00000467533 KIAA1524Q8TCG1 905 aa10.36□□□□□ -0.75
HDAC3-203ENST00000467533 TMX3Q96JJ7 454 aa10.36□□□□□ -0.75
HDAC3-203ENST00000467533 HSFY1Q96LI6 401 aa10.36□□□□□ -0.75
HDAC3-203ENST00000467533 TEFMQ96QE5 360 aaKnown RBP10.36□□□□□ -0.75
HDAC3-203ENST00000467533 ZSCAN16Q9H4T2 348 aaPredicted RBP10.36□□□□□ -0.75
HDAC3-203ENST00000467533 ST7Q9NRC1 585 aa10.36□□□□□ -0.75
HDAC3-203ENST00000467533 EXOC1Q9NV70 894 aa10.36□□□□□ -0.75
HDAC3-203ENST00000467533 OCIAD1Q9NX40 245 aa10.36□□□□□ -0.75
HDAC3-203ENST00000467533 TBC1D30Q9Y2I9 924 aa10.36□□□□□ -0.75
HDAC3-203ENST00000467533 B4E171 279 aa10.35□□□□□ -0.75
HDAC3-203ENST00000467533 SORBS2O94875 1100 aaKnown RBP10.35□□□□□ -0.75
HDAC3-203ENST00000467533 IGLV3-25P01717 112 aa10.35□□□□□ -0.75
HDAC3-203ENST00000467533 MPSTP25325 297 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms