RNA–Protein interactions for RNA: ENST00000467273.5

PTCD3-207, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 757 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-207ENST00000467273 DHX40Q8IX18 779 aaKnown RBP5.71□□□□□ -1.5
PTCD3-207ENST00000467273 CNTD1Q8N815 330 aa5.71□□□□□ -1.5
PTCD3-207ENST00000467273 DCBLD1Q8N8Z6 715 aa5.71□□□□□ -1.5
PTCD3-207ENST00000467273 STKLD1Q8NE28 680 aa5.71□□□□□ -1.5
PTCD3-207ENST00000467273 SCFD1Q8WVM8 642 aa5.71□□□□□ -1.5
PTCD3-207ENST00000467273 OVCA2Q8WZ82 227 aa5.71□□□□□ -1.5
PTCD3-207ENST00000467273 SKA1Q96BD8 255 aa5.71□□□□□ -1.5
PTCD3-207ENST00000467273 XPO6Q96QU8 1125 aaKnown RBP5.71□□□□□ -1.5
PTCD3-207ENST00000467273 SMAD5Q99717 465 aaKnown RBP5.71□□□□□ -1.5
PTCD3-207ENST00000467273 ARPC5LQ9BPX5 153 aa5.71□□□□□ -1.5
PTCD3-207ENST00000467273 RAB34Q9BZG1 259 aa5.71□□□□□ -1.5
PTCD3-207ENST00000467273 TMLHEQ9NVH6 421 aa5.71□□□□□ -1.5
PTCD3-207ENST00000467273 OXSMQ9NWU1 459 aa5.71□□□□□ -1.5
PTCD3-207ENST00000467273 CFAP97Q9P2B7 532 aa5.71□□□□□ -1.5
PTCD3-207ENST00000467273 EIF2B4Q9UI10 523 aaKnown RBP5.71□□□□□ -1.5
PTCD3-207ENST00000467273 CPSF3Q9UKF6 684 aaKnown RBP5.71□□□□□ -1.5
PTCD3-207ENST00000467273 DNM3Q9UQ16 869 aa5.71□□□□□ -1.5
PTCD3-207ENST00000467273 COA3Q9Y2R0 106 aaPredicted RBP5.71□□□□□ -1.5
PTCD3-207ENST00000467273 SNX14Q9Y5W7 946 aa5.71□□□□□ -1.5
PTCD3-207ENST00000467273 CPQQ9Y646 472 aa5.71□□□□□ -1.5
PTCD3-207ENST00000467273 MYLKQ15746 1914 aa5.71□□□□□ -1.5
PTCD3-207ENST00000467273 RELNP78509 3460 aa5.71□□□□□ -1.5
PTCD3-207ENST00000467273 TMEM131Q92545 1883 aa5.71□□□□□ -1.5
PTCD3-207ENST00000467273 USP9YO00507 2555 aaPredicted RBP5.7□□□□□ -1.5
PTCD3-207ENST00000467273 A0A0B4J269 797 aa5.7□□□□□ -1.5
PTCD3-207ENST00000467273 A0A1B0GTQ1 180 aa5.7□□□□□ -1.5
PTCD3-207ENST00000467273 SLC12A8A0AV02 714 aa5.7□□□□□ -1.5
PTCD3-207ENST00000467273 K7ENP7 123 aa5.7□□□□□ -1.5
PTCD3-207ENST00000467273 HNRNPDLO14979 420 aaKnown RBP5.7□□□□□ -1.5
PTCD3-207ENST00000467273 HUS1O60921 280 aa5.7□□□□□ -1.5
PTCD3-207ENST00000467273 LDOC1O95751 146 aaPredicted RBP5.7□□□□□ -1.5
PTCD3-207ENST00000467273 FAM200BP0CF97 657 aa5.7□□□□□ -1.5
PTCD3-207ENST00000467273 ACADMP11310 421 aa5.7□□□□□ -1.5
PTCD3-207ENST00000467273 ANXA13P27216 316 aa5.7□□□□□ -1.5
PTCD3-207ENST00000467273 ACVRL1P37023 503 aa5.7□□□□□ -1.5
PTCD3-207ENST00000467273 CCT6AP40227 531 aaKnown RBP5.7□□□□□ -1.5
PTCD3-207ENST00000467273 CSNK1EP49674 416 aaKnown RBP5.7□□□□□ -1.5
PTCD3-207ENST00000467273 LIG4P49917 911 aa5.7□□□□□ -1.5
PTCD3-207ENST00000467273 TUBP50607 506 aa5.7□□□□□ -1.5
PTCD3-207ENST00000467273 E2F1Q01094 437 aa5.7□□□□□ -1.5
PTCD3-207ENST00000467273 TOB2Q14106 344 aaPredicted RBP5.7□□□□□ -1.5
PTCD3-207ENST00000467273 ARHGAP44Q17R89 818 aa5.7□□□□□ -1.5
PTCD3-207ENST00000467273 FUT11Q495W5 492 aa5.7□□□□□ -1.5
PTCD3-207ENST00000467273 CCDC157Q569K6 752 aa5.7□□□□□ -1.5
PTCD3-207ENST00000467273 ARHGAP40Q5TG30 622 aa5.7□□□□□ -1.5
PTCD3-207ENST00000467273 FAM171BQ6P995 826 aa5.7□□□□□ -1.5
PTCD3-207ENST00000467273 INO80CQ6PI98 192 aaPredicted RBP5.7□□□□□ -1.5
PTCD3-207ENST00000467273 CRIP3Q6Q6R5 217 aa5.7□□□□□ -1.5
PTCD3-207ENST00000467273 C1orf186Q6ZWK4 172 aa5.7□□□□□ -1.5
PTCD3-207ENST00000467273 PDCL2Q8N4E4 241 aa5.7□□□□□ -1.5
PTCD3-207ENST00000467273 OTUD6BQ8N6M0 293 aa5.7□□□□□ -1.5
PTCD3-207ENST00000467273 LRRC52Q8N7C0 313 aa5.7□□□□□ -1.5
PTCD3-207ENST00000467273 PAF1Q8N7H5 531 aa5.7□□□□□ -1.5
PTCD3-207ENST00000467273 ADAMTS17Q8TE56 1095 aa5.7□□□□□ -1.5
PTCD3-207ENST00000467273 KCNE4Q8WWG9 221 aa5.7□□□□□ -1.5
PTCD3-207ENST00000467273 PRCCQ92733 491 aaPredicted RBP5.7□□□□□ -1.5
PTCD3-207ENST00000467273 ZBTB8AQ96BR9 441 aa5.7□□□□□ -1.5
PTCD3-207ENST00000467273 SIPA1Q96FS4 1042 aa5.7□□□□□ -1.5
PTCD3-207ENST00000467273 BICD1Q96G01 975 aa5.7□□□□□ -1.5
PTCD3-207ENST00000467273 CNDP2Q96KP4 475 aaKnown RBP5.7□□□□□ -1.5
PTCD3-207ENST00000467273 NOX5Q96PH1 765 aa5.7□□□□□ -1.5
PTCD3-207ENST00000467273 SLITRK1Q96PX8 696 aa5.7□□□□□ -1.5
PTCD3-207ENST00000467273 BOCQ9BWV1 1114 aa5.7□□□□□ -1.5
PTCD3-207ENST00000467273 HAPLN2Q9GZV7 340 aa5.7□□□□□ -1.5
PTCD3-207ENST00000467273 CPNE5Q9HCH3 593 aa5.7□□□□□ -1.5
PTCD3-207ENST00000467273 TM9SF3Q9HD45 589 aa5.7□□□□□ -1.5
PTCD3-207ENST00000467273 ZDHHC4Q9NPG8 344 aa5.7□□□□□ -1.5
PTCD3-207ENST00000467273 DNAJC17Q9NVM6 304 aaKnown RBP5.7□□□□□ -1.5
PTCD3-207ENST00000467273 GDAP2Q9NXN4 497 aa5.7□□□□□ -1.5
PTCD3-207ENST00000467273 DDX43Q9NXZ2 648 aaKnown RBP5.7□□□□□ -1.5
PTCD3-207ENST00000467273 DPP3Q9NY33 737 aa5.7□□□□□ -1.5
PTCD3-207ENST00000467273 LARSQ9P2J5 1176 aaKnown RBP5.7□□□□□ -1.5
PTCD3-207ENST00000467273 WDR35Q9P2L0 1181 aa5.7□□□□□ -1.5
PTCD3-207ENST00000467273 TRHDEQ9UKU6 1024 aa5.7□□□□□ -1.5
PTCD3-207ENST00000467273 CLCA2Q9UQC9 943 aa5.7□□□□□ -1.5
PTCD3-207ENST00000467273 ZBTB32Q9Y2Y4 487 aaPredicted RBP5.7□□□□□ -1.5
PTCD3-207ENST00000467273 DOPEY2Q9Y3R5 2298 aa5.7□□□□□ -1.5
PTCD3-207ENST00000467273 NOTCH2Q04721 2471 aa5.7□□□□□ -1.5
PTCD3-207ENST00000467273 MYH11P35749 1972 aa5.69□□□□□ -1.5
PTCD3-207ENST00000467273 KCNJ18B7U540 433 aa5.69□□□□□ -1.5
PTCD3-207ENST00000467273 DVL2O14641 736 aa5.69□□□□□ -1.5
PTCD3-207ENST00000467273 GABRDO14764 452 aa5.69□□□□□ -1.5
PTCD3-207ENST00000467273 VILLO15195 856 aa5.69□□□□□ -1.5
PTCD3-207ENST00000467273 SYNCRIPO60506 623 aaKnown RBP5.69□□□□□ -1.5
PTCD3-207ENST00000467273 TSPAN3O60637 253 aa5.69□□□□□ -1.5
PTCD3-207ENST00000467273 FZD7O75084 574 aa5.69□□□□□ -1.5
PTCD3-207ENST00000467273 IL18RAPO95256 599 aa5.69□□□□□ -1.5
PTCD3-207ENST00000467273 SLC9A1P19634 815 aa5.69□□□□□ -1.5
PTCD3-207ENST00000467273 CD27P26842 260 aa5.69□□□□□ -1.5
PTCD3-207ENST00000467273 MCM7P33993 719 aa5.69□□□□□ -1.5
PTCD3-207ENST00000467273 WASP42768 502 aa5.69□□□□□ -1.5
PTCD3-207ENST00000467273 IRF9Q00978 393 aa5.69□□□□□ -1.5
PTCD3-207ENST00000467273 OCRLQ01968 901 aa5.69□□□□□ -1.5
PTCD3-207ENST00000467273 ZBTB16Q05516 673 aa5.69□□□□□ -1.5
PTCD3-207ENST00000467273 RAPGEF1Q13905 1077 aa5.69□□□□□ -1.5
PTCD3-207ENST00000467273 EIF4HQ15056 248 aaKnown RBP5.69□□□□□ -1.5
PTCD3-207ENST00000467273 ANO4Q32M45 955 aa5.69□□□□□ -1.5
PTCD3-207ENST00000467273 MROH9Q5TGP6 573 aa5.69□□□□□ -1.5
PTCD3-207ENST00000467273 SDHAF4Q5VUM1 108 aa5.69□□□□□ -1.5
PTCD3-207ENST00000467273 SNX30Q5VWJ9 437 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms