RNA–Protein interactions for RNA: ENST00000467077.1

XRN1-206, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 674 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-206ENST00000467077 ZNF497Q6ZNH5 498 aa3.85□□□□□ -1.79
XRN1-206ENST00000467077 ANKS1BQ7Z6G8 1248 aa3.85□□□□□ -1.79
XRN1-206ENST00000467077 NRSN1Q8IZ57 195 aa3.85□□□□□ -1.79
XRN1-206ENST00000467077 ZNF248Q8NDW4 579 aa3.85□□□□□ -1.79
XRN1-206ENST00000467077 SVIPQ8NHG7 77 aa3.85□□□□□ -1.79
XRN1-206ENST00000467077 TP63Q9H3D4 680 aaPredicted RBP3.85□□□□□ -1.79
XRN1-206ENST00000467077 ZFP57Q9NU63 452 aa3.85□□□□□ -1.79
XRN1-206ENST00000467077 ARL15Q9NXU5 204 aa3.85□□□□□ -1.79
XRN1-206ENST00000467077 CDC23Q9UJX2 597 aa3.85□□□□□ -1.79
XRN1-206ENST00000467077 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP3.85□□□□□ -1.79
XRN1-206ENST00000467077 NPHP4O75161 1426 aaPredicted RBP3.85□□□□□ -1.79
XRN1-206ENST00000467077 UGGT1Q9NYU2 1555 aa3.85□□□□□ -1.79
XRN1-206ENST00000467077 AQP12BA6NM10 295 aa3.84□□□□□ -1.79
XRN1-206ENST00000467077 HNRNPCL2B2RXH8 293 aa3.84□□□□□ -1.79
XRN1-206ENST00000467077 NPIPB11E5RHQ5 1161 aa3.84□□□□□ -1.79
XRN1-206ENST00000467077 DNPH1O43598 174 aa3.84□□□□□ -1.79
XRN1-206ENST00000467077 ASNA1O43681 348 aa3.84□□□□□ -1.79
XRN1-206ENST00000467077 IFIT2P09913 472 aaKnown RBP3.84□□□□□ -1.79
XRN1-206ENST00000467077 FGF5P12034 268 aa3.84□□□□□ -1.79
XRN1-206ENST00000467077 TYK2P29597 1187 aa3.84□□□□□ -1.79
XRN1-206ENST00000467077 AKT1P31749 480 aa3.84□□□□□ -1.79
XRN1-206ENST00000467077 RPL15P61313 204 aaKnown RBP3.84□□□□□ -1.79
XRN1-206ENST00000467077 CTTNQ14247 550 aaKnown RBP3.84□□□□□ -1.79
XRN1-206ENST00000467077 FAM171A1Q5VUB5 890 aa3.84□□□□□ -1.79
XRN1-206ENST00000467077 ARHGAP11AQ6P4F7 1023 aa3.84□□□□□ -1.79
XRN1-206ENST00000467077 NEK10Q6ZWH5 1172 aa3.84□□□□□ -1.79
XRN1-206ENST00000467077 GATAD2AQ86YP4 633 aa3.84□□□□□ -1.79
XRN1-206ENST00000467077 PGBD5Q8N414 524 aa3.84□□□□□ -1.79
XRN1-206ENST00000467077 MAPK1IP1LQ8NDC0 245 aa3.84□□□□□ -1.79
XRN1-206ENST00000467077 ZNF501Q96CX3 271 aaPredicted RBP3.84□□□□□ -1.79
XRN1-206ENST00000467077 REXO5Q96IC2 774 aaKnown RBP3.84□□□□□ -1.79
XRN1-206ENST00000467077 FRMD8Q9BZ67 464 aaPredicted RBP3.84□□□□□ -1.79
XRN1-206ENST00000467077 EBF2Q9HAK2 575 aa3.84□□□□□ -1.79
XRN1-206ENST00000467077 ARFGAP3Q9NP61 516 aa3.84□□□□□ -1.79
XRN1-206ENST00000467077 CHST12Q9NRB3 414 aa3.84□□□□□ -1.79
XRN1-206ENST00000467077 POU2F3Q9UKI9 436 aa3.84□□□□□ -1.79
XRN1-206ENST00000467077 NFU1Q9UMS0 254 aa3.84□□□□□ -1.79
XRN1-206ENST00000467077 ZBTB1Q9Y2K1 713 aa3.84□□□□□ -1.79
XRN1-206ENST00000467077 SLC45A1Q9Y2W3 748 aa3.84□□□□□ -1.79
XRN1-206ENST00000467077 TNRQ92752 1358 aa3.84□□□□□ -1.79
XRN1-206ENST00000467077 SRCAPQ6ZRS2 3230 aa3.84□□□□□ -1.79
XRN1-206ENST00000467077 EEA1Q15075 1411 aa3.84□□□□□ -1.79
XRN1-206ENST00000467077 MED14O60244 1454 aa3.84□□□□□ -1.8
XRN1-206ENST00000467077 CCDC18Q5T9S5 1454 aa3.84□□□□□ -1.8
XRN1-206ENST00000467077 ARHGAP35Q9NRY4 1499 aa3.84□□□□□ -1.8
XRN1-206ENST00000467077 KDM5DQ9BY66 1539 aa3.84□□□□□ -1.8
XRN1-206ENST00000467077 FAM135AQ9P2D6 1515 aa3.84□□□□□ -1.8
XRN1-206ENST00000467077 UBR1Q8IWV7 1749 aa3.84□□□□□ -1.8
XRN1-206ENST00000467077 A0A1B0GVM2 712 aa3.83□□□□□ -1.8
XRN1-206ENST00000467077 C17orf102A2RUQ5 167 aa3.83□□□□□ -1.8
XRN1-206ENST00000467077 GOLGA6L3A6NEY3 463 aa3.83□□□□□ -1.8
XRN1-206ENST00000467077 KIF28PB7ZC32 967 aa3.83□□□□□ -1.8
XRN1-206ENST00000467077 PLIN1O60240 522 aa3.83□□□□□ -1.8
XRN1-206ENST00000467077 CH25HO95992 272 aa3.83□□□□□ -1.8
XRN1-206ENST00000467077 CYP3A4P08684 503 aa3.83□□□□□ -1.8
XRN1-206ENST00000467077 PEPDP12955 493 aa3.83□□□□□ -1.8
XRN1-206ENST00000467077 GRK5P34947 590 aa3.83□□□□□ -1.8
XRN1-206ENST00000467077 RPL3P39023 403 aaKnown RBP3.83□□□□□ -1.8
XRN1-206ENST00000467077 CSRP3P50461 194 aa3.83□□□□□ -1.8
XRN1-206ENST00000467077 CLCN3P51790 818 aa3.83□□□□□ -1.8
XRN1-206ENST00000467077 FOXL2P58012 376 aa3.83□□□□□ -1.8
XRN1-206ENST00000467077 FAM3BP58499 235 aaPredicted RBP3.83□□□□□ -1.8
XRN1-206ENST00000467077 LMO4P61968 165 aa3.83□□□□□ -1.8
XRN1-206ENST00000467077 DHX34Q14147 1143 aaKnown RBP3.83□□□□□ -1.8
XRN1-206ENST00000467077 LPAL2Q16609 132 aa3.83□□□□□ -1.8
XRN1-206ENST00000467077 ZNF484Q5JVG2 852 aa3.83□□□□□ -1.8
XRN1-206ENST00000467077 STXBP4Q6ZWJ1 553 aa3.83□□□□□ -1.8
XRN1-206ENST00000467077 FAM71BQ8TC56 605 aa3.83□□□□□ -1.8
XRN1-206ENST00000467077 STYXQ8WUJ0 223 aa3.83□□□□□ -1.8
XRN1-206ENST00000467077 CCDC134Q9H6E4 229 aa3.83□□□□□ -1.8
XRN1-206ENST00000467077 RAB21Q9UL25 225 aa3.83□□□□□ -1.8
XRN1-206ENST00000467077 TRPC5Q9UL62 973 aaPredicted RBP3.83□□□□□ -1.8
XRN1-206ENST00000467077 SLC12A4Q9UP95 1085 aa3.83□□□□□ -1.8
XRN1-206ENST00000467077 PZPP20742 1482 aa3.83□□□□□ -1.8
XRN1-206ENST00000467077 CEP152O94986 1710 aa3.83□□□□□ -1.8
XRN1-206ENST00000467077 GPATCH8Q9UKJ3 1502 aaKnown RBP3.82□□□□□ -1.8
XRN1-206ENST00000467077 PLEKHH2Q8IVE3 1493 aa3.82□□□□□ -1.8
XRN1-206ENST00000467077 NLRP1Q9C000 1473 aa3.82□□□□□ -1.8
XRN1-206ENST00000467077 C11orf97A0A1B0GVM6 126 aaPredicted RBP3.82□□□□□ -1.8
XRN1-206ENST00000467077 FFAR2O15552 330 aa3.82□□□□□ -1.8
XRN1-206ENST00000467077 CLDN7O95471 211 aa3.82□□□□□ -1.8
XRN1-206ENST00000467077 SERPINB3P29508 390 aa3.82□□□□□ -1.8
XRN1-206ENST00000467077 RFC1P35251 1148 aaPredicted RBP3.82□□□□□ -1.8
XRN1-206ENST00000467077 SF3A3Q12874 501 aaKnown RBP eCLIP3.82□□□□□ -1.8
XRN1-206ENST00000467077 SPARCL1Q14515 664 aa3.82□□□□□ -1.8
XRN1-206ENST00000467077 BTBD16Q32M84 506 aa3.82□□□□□ -1.8
XRN1-206ENST00000467077 PLK5Q496M5 336 aa3.82□□□□□ -1.8
XRN1-206ENST00000467077 CCDC146Q8IYE0 955 aa3.82□□□□□ -1.8
XRN1-206ENST00000467077 KBTBD3Q8NAB2 608 aa3.82□□□□□ -1.8
XRN1-206ENST00000467077 FAM76AQ8TAV0 307 aa3.82□□□□□ -1.8
XRN1-206ENST00000467077 MECRQ9BV79 373 aa3.82□□□□□ -1.8
XRN1-206ENST00000467077 UBXN6Q9BZV1 441 aa3.82□□□□□ -1.8
XRN1-206ENST00000467077 ZNF700Q9H0M5 742 aa3.82□□□□□ -1.8
XRN1-206ENST00000467077 OBP2BQ9NPH6 170 aa3.82□□□□□ -1.8
XRN1-206ENST00000467077 CDH22Q9UJ99 828 aa3.82□□□□□ -1.8
XRN1-206ENST00000467077 CACNA1FO60840 1977 aa3.82□□□□□ -1.8
XRN1-206ENST00000467077 KIAA1107Q9UPP5 1409 aa3.81□□□□□ -1.8
XRN1-206ENST00000467077 A0A087WV62 115 aa3.81□□□□□ -1.8
XRN1-206ENST00000467077 CYP3A7-CYP3A51PA0A087WV96 503 aa3.81□□□□□ -1.8
XRN1-206ENST00000467077 TBC1D3DA0A087WVF3 549 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms