RNA–Protein interactions for RNA: ENST00000463060.5

COL6A1-202, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 5

Gene COL6A1, Length 863 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-202ENST00000463060 FEM1CQ96JP0 617 aa14.5□□□□□ -0.09
COL6A1-202ENST00000463060 TUBGCP5Q96RT8 1024 aa14.5□□□□□ -0.09
COL6A1-202ENST00000463060 HEPHQ9BQS7 1158 aa14.5□□□□□ -0.09
COL6A1-202ENST00000463060 TDRD1Q9BXT4 1180 aaKnown RBP14.5□□□□□ -0.09
COL6A1-202ENST00000463060 LRRC40Q9H9A6 602 aa14.5□□□□□ -0.09
COL6A1-202ENST00000463060 CASS4Q9NQ75 786 aa14.5□□□□□ -0.09
COL6A1-202ENST00000463060 CACNA2D2Q9NY47 1150 aa14.5□□□□□ -0.09
COL6A1-202ENST00000463060 MUTYHQ9UIF7 546 aa14.5□□□□□ -0.09
COL6A1-202ENST00000463060 SLC8A2Q9UPR5 921 aa14.5□□□□□ -0.09
COL6A1-202ENST00000463060 MTF2Q9Y483 593 aaPredicted RBP14.5□□□□□ -0.09
COL6A1-202ENST00000463060 ARIH1Q9Y4X5 557 aaPredicted RBP14.5□□□□□ -0.09
COL6A1-202ENST00000463060 CKAP5Q14008 2032 aa14.49□□□□□ -0.09
COL6A1-202ENST00000463060 KANSL1LA0AUZ9 987 aa14.49□□□□□ -0.09
COL6A1-202ENST00000463060 ALOX15BO15296 676 aa14.49□□□□□ -0.09
COL6A1-202ENST00000463060 SOCS5O75159 536 aa14.49□□□□□ -0.09
COL6A1-202ENST00000463060 AGTP01019 485 aa14.49□□□□□ -0.09
COL6A1-202ENST00000463060 CTSLP07711 333 aa14.49□□□□□ -0.09
COL6A1-202ENST00000463060 PDHA1P08559 390 aa14.49□□□□□ -0.09
COL6A1-202ENST00000463060 ATXN1LP0C7T5 689 aaKnown RBP14.49□□□□□ -0.09
COL6A1-202ENST00000463060 MLNP12872 115 aa14.49□□□□□ -0.09
COL6A1-202ENST00000463060 TARSP26639 723 aaKnown RBP14.49□□□□□ -0.09
COL6A1-202ENST00000463060 TERF1P54274 439 aa14.49□□□□□ -0.09
COL6A1-202ENST00000463060 SEC13P55735 322 aa14.49□□□□□ -0.09
COL6A1-202ENST00000463060 ZXDAP98168 799 aa14.49□□□□□ -0.09
COL6A1-202ENST00000463060 CDK18Q07002 472 aa14.49□□□□□ -0.09
COL6A1-202ENST00000463060 SPARCL1Q14515 664 aa14.49□□□□□ -0.09
COL6A1-202ENST00000463060 HSF5Q4G112 596 aaPredicted RBP14.49□□□□□ -0.09
COL6A1-202ENST00000463060 C2orf27AQ580R0 203 aa14.49□□□□□ -0.09
COL6A1-202ENST00000463060 TJAP1Q5JTD0 557 aa14.49□□□□□ -0.09
COL6A1-202ENST00000463060 SYCP2LQ5T4T6 812 aa14.49□□□□□ -0.09
COL6A1-202ENST00000463060 CAMK1DQ8IU85 385 aa14.49□□□□□ -0.09
COL6A1-202ENST00000463060 SYNPOQ8N3V7 929 aa14.49□□□□□ -0.09
COL6A1-202ENST00000463060 ZCCHC9Q8N567 271 aaKnown RBP14.49□□□□□ -0.09
COL6A1-202ENST00000463060 IFT81Q8WYA0 676 aa14.49□□□□□ -0.09
COL6A1-202ENST00000463060 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.49□□□□□ -0.09
COL6A1-202ENST00000463060 LRIG1Q96JA1 1093 aa14.49□□□□□ -0.09
COL6A1-202ENST00000463060 PWWP2AQ96N64 755 aa14.49□□□□□ -0.09
COL6A1-202ENST00000463060 NECAB3Q96P71 396 aaPredicted RBP14.49□□□□□ -0.09
COL6A1-202ENST00000463060 NELL2Q99435 816 aa14.49□□□□□ -0.09
COL6A1-202ENST00000463060 FRMD8Q9BZ67 464 aaPredicted RBP14.49□□□□□ -0.09
COL6A1-202ENST00000463060 FOXP3Q9BZS1 431 aa14.49□□□□□ -0.09
COL6A1-202ENST00000463060 PPM1HQ9ULR3 514 aa14.49□□□□□ -0.09
COL6A1-202ENST00000463060 NFU1Q9UMS0 254 aa14.49□□□□□ -0.09
COL6A1-202ENST00000463060 RAI2Q9Y5P3 530 aa14.49□□□□□ -0.09
COL6A1-202ENST00000463060 ATG2BQ96BY7 2078 aa14.49□□□□□ -0.09
COL6A1-202ENST00000463060 ANKRD36A6QL64 1941 aa14.49□□□□□ -0.09
COL6A1-202ENST00000463060 A0A1W2PQF6 199 aa14.48□□□□□ -0.09
COL6A1-202ENST00000463060 GOLGA6CA6NDK9 693 aa14.48□□□□□ -0.09
COL6A1-202ENST00000463060 GOLGA6BA6NDN3 693 aa14.48□□□□□ -0.09
COL6A1-202ENST00000463060 CHURC1-FNTBB4DL54 471 aa14.48□□□□□ -0.09
COL6A1-202ENST00000463060 E7ESA3 106 aa14.48□□□□□ -0.09
COL6A1-202ENST00000463060 E7EVH7 732 aa14.48□□□□□ -0.09
COL6A1-202ENST00000463060 RNF40O75150 1001 aa14.48□□□□□ -0.09
COL6A1-202ENST00000463060 USP12O75317 370 aa14.48□□□□□ -0.09
COL6A1-202ENST00000463060 PPFIA2O75334 1257 aa14.48□□□□□ -0.09
COL6A1-202ENST00000463060 EPHX1P07099 455 aa14.48□□□□□ -0.09
COL6A1-202ENST00000463060 GOLGA6DP0CG33 693 aa14.48□□□□□ -0.09
COL6A1-202ENST00000463060 GRM3Q14832 879 aa14.48□□□□□ -0.09
COL6A1-202ENST00000463060 SLC1A5Q15758 541 aa14.48□□□□□ -0.09
COL6A1-202ENST00000463060 FNBP1LQ5T0N5 605 aa14.48□□□□□ -0.09
COL6A1-202ENST00000463060 NAPEPLDQ6IQ20 393 aa14.48□□□□□ -0.09
COL6A1-202ENST00000463060 LRRC8BQ6P9F7 803 aa14.48□□□□□ -0.09
COL6A1-202ENST00000463060 LINC00523Q86TU6 105 aa14.48□□□□□ -0.09
COL6A1-202ENST00000463060 CHPFQ8IZ52 775 aa14.48□□□□□ -0.09
COL6A1-202ENST00000463060 SIX5Q8N196 739 aa14.48□□□□□ -0.09
COL6A1-202ENST00000463060 STK40Q8N2I9 435 aa14.48□□□□□ -0.09
COL6A1-202ENST00000463060 AGGF1Q8N302 714 aaeCLIP14.48□□□□□ -0.09
COL6A1-202ENST00000463060 TMIEQ8NEW7 156 aa14.48□□□□□ -0.09
COL6A1-202ENST00000463060 IPMKQ8NFU5 416 aa14.48□□□□□ -0.09
COL6A1-202ENST00000463060 ZNF641Q96N77 438 aaPredicted RBP14.48□□□□□ -0.09
COL6A1-202ENST00000463060 SERPINB12Q96P63 405 aa14.48□□□□□ -0.09
COL6A1-202ENST00000463060 TBL1YQ9BQ87 522 aa14.48□□□□□ -0.09
COL6A1-202ENST00000463060 OSBPL6Q9BZF3 934 aa14.48□□□□□ -0.09
COL6A1-202ENST00000463060 SUV39H2Q9H5I1 410 aa14.48□□□□□ -0.09
COL6A1-202ENST00000463060 ATP13A3Q9H7F0 1226 aa14.48□□□□□ -0.09
COL6A1-202ENST00000463060 LTB4R2Q9NPC1 389 aa14.48□□□□□ -0.09
COL6A1-202ENST00000463060 GOLGA6AQ9NYA3 693 aa14.48□□□□□ -0.09
COL6A1-202ENST00000463060 FBXL21Q9UKT6 434 aa14.48□□□□□ -0.09
COL6A1-202ENST00000463060 NDRG2Q9UN36 371 aaKnown RBP14.48□□□□□ -0.09
COL6A1-202ENST00000463060 MRPS17Q9Y2R5 130 aaKnown RBP14.48□□□□□ -0.09
COL6A1-202ENST00000463060 PPIL1Q9Y3C6 166 aa14.48□□□□□ -0.09
COL6A1-202ENST00000463060 TSPAN11A1L157 253 aa14.47□□□□□ -0.09
COL6A1-202ENST00000463060 GOLGA8MH3BSY2 632 aa14.47□□□□□ -0.09
COL6A1-202ENST00000463060 LEFTY1O75610 366 aa14.47□□□□□ -0.09
COL6A1-202ENST00000463060 PGLSO95336 258 aa14.47□□□□□ -0.09
COL6A1-202ENST00000463060 PIGNO95427 931 aa14.47□□□□□ -0.09
COL6A1-202ENST00000463060 KLF8O95600 359 aaPredicted RBP14.47□□□□□ -0.09
COL6A1-202ENST00000463060 NDST3O95803 873 aa14.47□□□□□ -0.09
COL6A1-202ENST00000463060 FAM153BP0C7A2 387 aa14.47□□□□□ -0.09
COL6A1-202ENST00000463060 MCM3P25205 808 aa14.47□□□□□ -0.09
COL6A1-202ENST00000463060 WASP42768 502 aa14.47□□□□□ -0.09
COL6A1-202ENST00000463060 CHRNA4P43681 627 aa14.47□□□□□ -0.09
COL6A1-202ENST00000463060 RECQLP46063 649 aaPredicted RBP14.47□□□□□ -0.09
COL6A1-202ENST00000463060 RPL26P61254 145 aaKnown RBP14.47□□□□□ -0.09
COL6A1-202ENST00000463060 RAD51Q06609 339 aa14.47□□□□□ -0.09
COL6A1-202ENST00000463060 BCL2L1Q07817 233 aa14.47□□□□□ -0.09
COL6A1-202ENST00000463060 ELAVL3Q14576 367 aaKnown RBP14.47□□□□□ -0.09
COL6A1-202ENST00000463060 PCSK7Q16549 785 aa14.47□□□□□ -0.09
COL6A1-202ENST00000463060 FAM153CQ494X1 144 aa14.47□□□□□ -0.09
COL6A1-202ENST00000463060 MSS51Q4VC12 460 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 113.5 ms