RNA–Protein interactions for RNA: ENST00000460485.1

ERCC3-205, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 3

Gene ERCC3, Length 815 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-205ENST00000460485 PSAT1Q9Y617 370 aa14.26□□□□□ -0.13
ERCC3-205ENST00000460485 A0A096LPK6 155 aa14.25□□□□□ -0.13
ERCC3-205ENST00000460485 A0A1B0GVM2 712 aa14.25□□□□□ -0.13
ERCC3-205ENST00000460485 ILVBLA1L0T0 632 aa14.25□□□□□ -0.13
ERCC3-205ENST00000460485 TYW5A2RUC4 315 aaKnown RBP14.25□□□□□ -0.13
ERCC3-205ENST00000460485 TCAF2A6NFQ2 919 aa14.25□□□□□ -0.13
ERCC3-205ENST00000460485 IL9P15248 144 aa14.25□□□□□ -0.13
ERCC3-205ENST00000460485 PFKLP17858 780 aa14.25□□□□□ -0.13
ERCC3-205ENST00000460485 KCNA5P22460 613 aa14.25□□□□□ -0.13
ERCC3-205ENST00000460485 NMBRP28336 390 aa14.25□□□□□ -0.13
ERCC3-205ENST00000460485 OR1D2P34982 312 aa14.25□□□□□ -0.13
ERCC3-205ENST00000460485 SERPINB5P36952 375 aa14.25□□□□□ -0.13
ERCC3-205ENST00000460485 SLC26A3P40879 764 aa14.25□□□□□ -0.13
ERCC3-205ENST00000460485 CD151P48509 253 aa14.25□□□□□ -0.13
ERCC3-205ENST00000460485 CLCN5P51795 746 aa14.25□□□□□ -0.13
ERCC3-205ENST00000460485 POU4F1Q01851 419 aa14.25□□□□□ -0.13
ERCC3-205ENST00000460485 ZBTB16Q05516 673 aa14.25□□□□□ -0.13
ERCC3-205ENST00000460485 NSUN2Q08J23 767 aaKnown RBP eCLIP14.25□□□□□ -0.13
ERCC3-205ENST00000460485 RAB33AQ14088 237 aa14.25□□□□□ -0.13
ERCC3-205ENST00000460485 TAF12Q16514 161 aa14.25□□□□□ -0.13
ERCC3-205ENST00000460485 PABPC1LQ4VXU2 614 aaKnown RBP14.25□□□□□ -0.13
ERCC3-205ENST00000460485 RSPO2Q6UXX9 243 aaPredicted RBP14.25□□□□□ -0.13
ERCC3-205ENST00000460485 DDX53Q86TM3 631 aaKnown RBP14.25□□□□□ -0.13
ERCC3-205ENST00000460485 ZC3HC1Q86WB0 502 aaKnown RBP14.25□□□□□ -0.13
ERCC3-205ENST00000460485 SLC39A11Q8N1S5 342 aa14.25□□□□□ -0.13
ERCC3-205ENST00000460485 C2CD4AQ8NCU7 369 aaPredicted RBP14.25□□□□□ -0.13
ERCC3-205ENST00000460485 CFAP61Q8NHU2 1237 aa14.25□□□□□ -0.13
ERCC3-205ENST00000460485 SKA1Q96BD8 255 aa14.25□□□□□ -0.13
ERCC3-205ENST00000460485 ZNF689Q96CS4 500 aaPredicted RBP14.25□□□□□ -0.13
ERCC3-205ENST00000460485 ZNF512Q96ME7 567 aaPredicted RBP14.25□□□□□ -0.13
ERCC3-205ENST00000460485 TRIM56Q9BRZ2 755 aaKnown RBP14.25□□□□□ -0.13
ERCC3-205ENST00000460485 TMEM120AQ9BXJ8 343 aa14.25□□□□□ -0.13
ERCC3-205ENST00000460485 NT5MQ9NPB1 228 aa14.25□□□□□ -0.13
ERCC3-205ENST00000460485 IARS2Q9NSE4 1012 aaKnown RBP14.25□□□□□ -0.13
ERCC3-205ENST00000460485 MRGBPQ9NV56 204 aa14.25□□□□□ -0.13
ERCC3-205ENST00000460485 NDFIP2Q9NV92 336 aa14.25□□□□□ -0.13
ERCC3-205ENST00000460485 SEPT3Q9UH03 358 aa14.25□□□□□ -0.13
ERCC3-205ENST00000460485 STOML2Q9UJZ1 356 aa14.25□□□□□ -0.13
ERCC3-205ENST00000460485 NUDT5Q9UKK9 219 aa14.25□□□□□ -0.13
ERCC3-205ENST00000460485 FAM50BQ9Y247 325 aa14.25□□□□□ -0.13
ERCC3-205ENST00000460485 SLC27A5Q9Y2P5 690 aa14.25□□□□□ -0.13
ERCC3-205ENST00000460485 HELZP42694 1942 aaKnown RBP14.24□□□□□ -0.13
ERCC3-205ENST00000460485 CXorf51AA0A1B0GTR3 108 aa14.24□□□□□ -0.13
ERCC3-205ENST00000460485 LOC285095A0A1B0GVY8 99 aa14.24□□□□□ -0.13
ERCC3-205ENST00000460485 ZNF840PA6NDX5 716 aa14.24□□□□□ -0.13
ERCC3-205ENST00000460485 C19orf67A6NJJ6 358 aa14.24□□□□□ -0.13
ERCC3-205ENST00000460485 MGRN1O60291 552 aa14.24□□□□□ -0.13
ERCC3-205ENST00000460485 PMPCBO75439 489 aa14.24□□□□□ -0.13
ERCC3-205ENST00000460485 WFS1O76024 890 aa14.24□□□□□ -0.13
ERCC3-205ENST00000460485 MT-CYBP00156 380 aaPredicted RBP14.24□□□□□ -0.13
ERCC3-205ENST00000460485 SERPINF2P08697 491 aa14.24□□□□□ -0.13
ERCC3-205ENST00000460485 CPA3P15088 417 aa14.24□□□□□ -0.13
ERCC3-205ENST00000460485 CALB2P22676 271 aa14.24□□□□□ -0.13
ERCC3-205ENST00000460485 SLC8A1P32418 973 aa14.24□□□□□ -0.13
ERCC3-205ENST00000460485 ARCN1P48444 511 aaKnown RBP14.24□□□□□ -0.13
ERCC3-205ENST00000460485 PCLAFQ15004 111 aa14.24□□□□□ -0.13
ERCC3-205ENST00000460485 SPRED3Q2MJR0 410 aa14.24□□□□□ -0.13
ERCC3-205ENST00000460485 ALFQ53S48 1182 aa14.24□□□□□ -0.13
ERCC3-205ENST00000460485 TSTD2Q5T7W7 516 aa14.24□□□□□ -0.13
ERCC3-205ENST00000460485 PRSS55Q6UWB4 352 aaPredicted RBP14.24□□□□□ -0.13
ERCC3-205ENST00000460485 TFAP2DQ7Z6R9 452 aa14.24□□□□□ -0.13
ERCC3-205ENST00000460485 CLNKQ7Z7G1 428 aa14.24□□□□□ -0.13
ERCC3-205ENST00000460485 TCEAL8Q8IYN2 117 aa14.24□□□□□ -0.13
ERCC3-205ENST00000460485 UNC5BQ8IZJ1 945 aa14.24□□□□□ -0.13
ERCC3-205ENST00000460485 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.24□□□□□ -0.13
ERCC3-205ENST00000460485 SPATA22Q8NHS9 363 aa14.24□□□□□ -0.13
ERCC3-205ENST00000460485 PIWIL2Q8TC59 973 aaKnown RBP14.24□□□□□ -0.13
ERCC3-205ENST00000460485 GDPD5Q8WTR4 605 aa14.24□□□□□ -0.13
ERCC3-205ENST00000460485 BCL7CQ8WUZ0 217 aaPredicted RBP14.24□□□□□ -0.13
ERCC3-205ENST00000460485 IGSF8Q969P0 613 aa14.24□□□□□ -0.13
ERCC3-205ENST00000460485 TOP1MTQ969P6 601 aa14.24□□□□□ -0.13
ERCC3-205ENST00000460485 PABPC5Q96DU9 382 aaKnown RBP14.24□□□□□ -0.13
ERCC3-205ENST00000460485 RAD9AQ99638 391 aa14.24□□□□□ -0.13
ERCC3-205ENST00000460485 PRRX2Q99811 253 aa14.24□□□□□ -0.13
ERCC3-205ENST00000460485 CRISPLD1Q9H336 500 aa14.24□□□□□ -0.13
ERCC3-205ENST00000460485 CCSER2Q9H7U1 834 aa14.24□□□□□ -0.13
ERCC3-205ENST00000460485 RC3H2Q9HBD1 1191 aaKnown RBP14.24□□□□□ -0.13
ERCC3-205ENST00000460485 PDFQ9HBH1 243 aa14.24□□□□□ -0.13
ERCC3-205ENST00000460485 SPG21Q9NZD8 308 aa14.24□□□□□ -0.13
ERCC3-205ENST00000460485 EMCNQ9ULC0 261 aa14.24□□□□□ -0.13
ERCC3-205ENST00000460485 YIPF1Q9Y548 306 aa14.24□□□□□ -0.13
ERCC3-205ENST00000460485 USP34Q70CQ2 3546 aa14.23□□□□□ -0.13
ERCC3-205ENST00000460485 A0A0G2JND7 137 aa14.23□□□□□ -0.13
ERCC3-205ENST00000460485 CNTN5O94779 1100 aa14.23□□□□□ -0.13
ERCC3-205ENST00000460485 RALBP11234 206 aa14.23□□□□□ -0.13
ERCC3-205ENST00000460485 FGF3P11487 239 aaPredicted RBP14.23□□□□□ -0.13
ERCC3-205ENST00000460485 ALOX15P16050 662 aaPredicted RBP14.23□□□□□ -0.13
ERCC3-205ENST00000460485 STMN1P16949 149 aa14.23□□□□□ -0.13
ERCC3-205ENST00000460485 PTPN4P29074 926 aa14.23□□□□□ -0.13
ERCC3-205ENST00000460485 ELF1P32519 619 aa14.23□□□□□ -0.13
ERCC3-205ENST00000460485 EPHB3P54753 998 aa14.23□□□□□ -0.13
ERCC3-205ENST00000460485 SLC12A2P55011 1212 aa14.23□□□□□ -0.13
ERCC3-205ENST00000460485 RAB10P61026 200 aa14.23□□□□□ -0.13
ERCC3-205ENST00000460485 GNA12Q03113 381 aa14.23□□□□□ -0.13
ERCC3-205ENST00000460485 ACVR1Q04771 509 aa14.23□□□□□ -0.13
ERCC3-205ENST00000460485 POU6F1Q14863 301 aa14.23□□□□□ -0.13
ERCC3-205ENST00000460485 SNCBQ16143 134 aa14.23□□□□□ -0.13
ERCC3-205ENST00000460485 TCTN1Q2MV58 587 aa14.23□□□□□ -0.13
ERCC3-205ENST00000460485 SPRED2Q7Z698 418 aa14.23□□□□□ -0.13
ERCC3-205ENST00000460485 TMEM173Q86WV6 379 aaPredicted RBP14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms